RNA–Protein interactions for RNA: ENST00000419459.1

LINC00642-201, long intergenic non-protein coding RNA 642, humanhuman

TSL 2 BASIC

Gene LINC00642, Length 2,026 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-201ENST00000419459 TRIM75PA6NK02 468 aa14.78□□□□□ -0.04
LINC00642-201ENST00000419459 USP17L5A8MUK1 530 aa14.78□□□□□ -0.04
LINC00642-201ENST00000419459 PLEKHA8P1O95397 391 aa14.78□□□□□ -0.04
LINC00642-201ENST00000419459 CTDNEP1O95476 244 aa14.78□□□□□ -0.04
LINC00642-201ENST00000419459 CST9Q5W186 159 aa14.78□□□□□ -0.04
LINC00642-201ENST00000419459 FANCBQ8NB91 859 aa14.78□□□□□ -0.04
LINC00642-201ENST00000419459 ZNF784Q8NCA9 323 aaPredicted RBP14.78□□□□□ -0.04
LINC00642-201ENST00000419459 ANKS1AQ92625 1134 aa14.78□□□□□ -0.04
LINC00642-201ENST00000419459 PHKBQ93100 1093 aa14.78□□□□□ -0.04
LINC00642-201ENST00000419459 PICK1Q9NRD5 415 aa14.78□□□□□ -0.04
LINC00642-201ENST00000419459 SNCAIPQ9Y6H5 919 aa14.78□□□□□ -0.04
LINC00642-201ENST00000419459 ZHX2Q9Y6X8 837 aa14.78□□□□□ -0.04
LINC00642-201ENST00000419459 AP5Z1O43299 807 aa14.77□□□□□ -0.04
LINC00642-201ENST00000419459 CAVIN2O95810 425 aa14.77□□□□□ -0.04
LINC00642-201ENST00000419459 PDHBP11177 359 aa14.77□□□□□ -0.04
LINC00642-201ENST00000419459 PTPRAP18433 802 aa14.77□□□□□ -0.04
LINC00642-201ENST00000419459 NT5C2P49902 561 aa14.77□□□□□ -0.04
LINC00642-201ENST00000419459 PLCB2Q00722 1185 aa14.77□□□□□ -0.04
LINC00642-201ENST00000419459 MTMR2Q13614 643 aa14.77□□□□□ -0.04
LINC00642-201ENST00000419459 MAP3K11Q16584 847 aa14.77□□□□□ -0.04
LINC00642-201ENST00000419459 RTN1Q16799 776 aa14.77□□□□□ -0.04
LINC00642-201ENST00000419459 KCTD1Q719H9 257 aa14.77□□□□□ -0.04
LINC00642-201ENST00000419459 NBPF11Q86T75 865 aa14.77□□□□□ -0.04
LINC00642-201ENST00000419459 DDX11Q96FC9 970 aa14.77□□□□□ -0.04
LINC00642-201ENST00000419459 ELP3Q9H9T3 547 aa14.77□□□□□ -0.04
LINC00642-201ENST00000419459 NYAP2Q9P242 653 aa14.77□□□□□ -0.04
LINC00642-201ENST00000419459 PTPRFP10586 1907 aa14.77□□□□□ -0.05
LINC00642-201ENST00000419459 MYH6P13533 1939 aa14.77□□□□□ -0.05
LINC00642-201ENST00000419459 hCG_1642624A0A1W2PR95 340 aa14.76□□□□□ -0.05
LINC00642-201ENST00000419459 IREB2P48200 963 aaKnown RBP14.76□□□□□ -0.05
LINC00642-201ENST00000419459 MAP3K9P80192 1104 aa14.76□□□□□ -0.05
LINC00642-201ENST00000419459 SPP2Q13103 211 aa14.76□□□□□ -0.05
LINC00642-201ENST00000419459 SPDYE4A6NLX3 237 aa14.76□□□□□ -0.05
LINC00642-201ENST00000419459 F5H6K3 240 aa14.76□□□□□ -0.05
LINC00642-201ENST00000419459 CPLX1O14810 134 aa14.76□□□□□ -0.05
LINC00642-201ENST00000419459 DDAH1O94760 285 aa14.76□□□□□ -0.05
LINC00642-201ENST00000419459 KLRC3Q07444 240 aa14.76□□□□□ -0.05
LINC00642-201ENST00000419459 CCDC178Q5BJE1 867 aa14.76□□□□□ -0.05
LINC00642-201ENST00000419459 CREBRFQ8IUR6 639 aa14.76□□□□□ -0.05
LINC00642-201ENST00000419459 NSUN7Q8NE18 718 aaKnown RBP14.76□□□□□ -0.05
LINC00642-201ENST00000419459 ARHGEF10LQ9HCE6 1279 aa14.76□□□□□ -0.05
LINC00642-201ENST00000419459 MAD2L2Q9UI95 211 aa14.76□□□□□ -0.05
LINC00642-201ENST00000419459 DDX41Q9UJV9 622 aaKnown RBP14.76□□□□□ -0.05
LINC00642-201ENST00000419459 MTMR6Q9Y217 621 aa14.76□□□□□ -0.05
LINC00642-201ENST00000419459 CSADQ9Y600 493 aa14.76□□□□□ -0.05
LINC00642-201ENST00000419459 NDUFB10O96000 172 aa14.75□□□□□ -0.05
LINC00642-201ENST00000419459 ANKRD13AQ8IZ07 590 aa14.75□□□□□ -0.05
LINC00642-201ENST00000419459 CTCFLQ8NI51 663 aaPredicted RBP14.75□□□□□ -0.05
LINC00642-201ENST00000419459 OTUD5Q96G74 571 aa14.75□□□□□ -0.05
LINC00642-201ENST00000419459 NUP62CLQ9H1M0 184 aa14.75□□□□□ -0.05
LINC00642-201ENST00000419459 TMX2Q9Y320 296 aa14.75□□□□□ -0.05
LINC00642-201ENST00000419459 MORC2Q9Y6X9 1032 aaPredicted RBP14.75□□□□□ -0.05
LINC00642-201ENST00000419459 KRT85P78386 507 aa14.75□□□□□ -0.05
LINC00642-201ENST00000419459 NTRK3Q16288 839 aa14.75□□□□□ -0.05
LINC00642-201ENST00000419459 MKL1Q969V6 931 aa14.75□□□□□ -0.05
LINC00642-201ENST00000419459 GBA2Q9HCG7 927 aaPredicted RBP14.75□□□□□ -0.05
LINC00642-201ENST00000419459 GPCPD1Q9NPB8 672 aa14.75□□□□□ -0.05
LINC00642-201ENST00000419459 PTPDC1A2A3K4 754 aa14.74□□□□□ -0.05
LINC00642-201ENST00000419459 NEMFO60524 1076 aa14.74□□□□□ -0.05
LINC00642-201ENST00000419459 PTGS1P23219 599 aa14.74□□□□□ -0.05
LINC00642-201ENST00000419459 GJB2P29033 226 aa14.74□□□□□ -0.05
LINC00642-201ENST00000419459 CDC25BP30305 580 aa14.74□□□□□ -0.05
LINC00642-201ENST00000419459 SLC16A2P36021 539 aa14.74□□□□□ -0.05
LINC00642-201ENST00000419459 SLC1A4P43007 532 aa14.74□□□□□ -0.05
LINC00642-201ENST00000419459 FOSBP53539 338 aa14.74□□□□□ -0.05
LINC00642-201ENST00000419459 DNM1Q05193 864 aaKnown RBP14.74□□□□□ -0.05
LINC00642-201ENST00000419459 MKRN3Q13064 507 aaKnown RBP14.74□□□□□ -0.05
LINC00642-201ENST00000419459 CCDC96Q2M329 555 aa14.74□□□□□ -0.05
LINC00642-201ENST00000419459 SLC35G1Q2M3R5 365 aa14.74□□□□□ -0.05
LINC00642-201ENST00000419459 SLFN13Q68D06 897 aa14.74□□□□□ -0.05
LINC00642-201ENST00000419459 TTBK2Q6IQ55 1244 aa14.74□□□□□ -0.05
LINC00642-201ENST00000419459 SAMD1Q6SPF0 538 aaPredicted RBP14.74□□□□□ -0.05
LINC00642-201ENST00000419459 RBM43Q6ZSC3 357 aaKnown RBP14.74□□□□□ -0.05
LINC00642-201ENST00000419459 ARMC9Q7Z3E5 817 aa14.74□□□□□ -0.05
LINC00642-201ENST00000419459 SPC24Q8NBT2 197 aa14.74□□□□□ -0.05
LINC00642-201ENST00000419459 UBA5Q9GZZ9 404 aa14.74□□□□□ -0.05
LINC00642-201ENST00000419459 DDX19AQ9NUU7 478 aaKnown RBP14.74□□□□□ -0.05
LINC00642-201ENST00000419459 IRF6O14896 467 aa14.73□□□□□ -0.05
LINC00642-201ENST00000419459 CYTH3O43739 400 aa14.73□□□□□ -0.05
LINC00642-201ENST00000419459 PARP1P09874 1014 aaKnown RBP14.73□□□□□ -0.05
LINC00642-201ENST00000419459 PDCP20941 246 aa14.73□□□□□ -0.05
LINC00642-201ENST00000419459 HMGCS2P54868 508 aa14.73□□□□□ -0.05
LINC00642-201ENST00000419459 TYRO3Q06418 890 aa14.73□□□□□ -0.05
LINC00642-201ENST00000419459 GRM4Q14833 912 aa14.73□□□□□ -0.05
LINC00642-201ENST00000419459 NOL9Q5SY16 702 aaKnown RBP14.73□□□□□ -0.05
LINC00642-201ENST00000419459 PLA2G4DQ86XP0 818 aa14.73□□□□□ -0.05
LINC00642-201ENST00000419459 SRBD1Q8N5C6 995 aaKnown RBP14.73□□□□□ -0.05
LINC00642-201ENST00000419459 ZNF280CQ8ND82 737 aa14.73□□□□□ -0.05
LINC00642-201ENST00000419459 CCDC112Q8NEF3 446 aa14.73□□□□□ -0.05
LINC00642-201ENST00000419459 GJB4Q9NTQ9 266 aa14.73□□□□□ -0.05
LINC00642-201ENST00000419459 MRVI1Q9Y6F6 885 aa14.73□□□□□ -0.05
LINC00642-201ENST00000419459 NID2Q14112 1375 aa14.73□□□□□ -0.05
LINC00642-201ENST00000419459 USP17L10C9JJH3 530 aa14.73□□□□□ -0.05
LINC00642-201ENST00000419459 KLRF2D3W0D1 207 aa14.73□□□□□ -0.05
LINC00642-201ENST00000419459 CALM1P0DP23 149 aa14.73□□□□□ -0.05
LINC00642-201ENST00000419459 CALM2P0DP24 149 aa14.73□□□□□ -0.05
LINC00642-201ENST00000419459 CALM3P0DP25 149 aa14.73□□□□□ -0.05
LINC00642-201ENST00000419459 SNHG28P0DPA3 235 aa14.73□□□□□ -0.05
LINC00642-201ENST00000419459 ZNF771Q7L3S4 317 aaPredicted RBP14.73□□□□□ -0.05
LINC00642-201ENST00000419459 OPTNQ96CV9 577 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms