RNA–Protein interactions for RNA: ENST00000418373.1

PDLIM4-203, Transcript of PDZ and LIM domain 4, humanhuman

TSL 5

Gene PDLIM4, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-203ENST00000418373 RIPK3Q9Y572 518 aa15.26■□□□□ 0.03
PDLIM4-203ENST00000418373 SPTBN5Q9NRC6 3674 aaKnown RBP15.26■□□□□ 0.03
PDLIM4-203ENST00000418373 RNF113AO15541 343 aaKnown RBP15.25■□□□□ 0.03
PDLIM4-203ENST00000418373 GPAA1O43292 621 aa15.25■□□□□ 0.03
PDLIM4-203ENST00000418373 PGK1P00558 417 aa15.25■□□□□ 0.03
PDLIM4-203ENST00000418373 AKR1A1P14550 325 aa15.25■□□□□ 0.03
PDLIM4-203ENST00000418373 ITGB8P26012 769 aa15.25■□□□□ 0.03
PDLIM4-203ENST00000418373 TSHZ3Q63HK5 1081 aa15.25■□□□□ 0.03
PDLIM4-203ENST00000418373 MAMDC4Q6UXC1 1216 aa15.25■□□□□ 0.03
PDLIM4-203ENST00000418373 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.25■□□□□ 0.03
PDLIM4-203ENST00000418373 RNF180Q86T96 592 aa15.25■□□□□ 0.03
PDLIM4-203ENST00000418373 LENG1Q96BZ8 264 aaPredicted RBP15.25■□□□□ 0.03
PDLIM4-203ENST00000418373 PLIN4Q96Q06 1357 aa15.24■□□□□ 0.03
PDLIM4-203ENST00000418373 SYNGAP1Q96PV0 1343 aa15.24■□□□□ 0.03
PDLIM4-203ENST00000418373 A0A1W2PQ45 241 aaPredicted RBP15.24■□□□□ 0.03
PDLIM4-203ENST00000418373 A0A1W2PQY0 241 aa15.24■□□□□ 0.03
PDLIM4-203ENST00000418373 MINDY4BA8MYZ0 360 aa15.24■□□□□ 0.03
PDLIM4-203ENST00000418373 M0R2C6 588 aa15.24■□□□□ 0.03
PDLIM4-203ENST00000418373 RAD21O60216 631 aa15.24■□□□□ 0.03
PDLIM4-203ENST00000418373 SNAI1O95863 264 aaPredicted RBP15.24■□□□□ 0.03
PDLIM4-203ENST00000418373 ZFYP08048 801 aaPredicted RBP15.24■□□□□ 0.03
PDLIM4-203ENST00000418373 SNRNP48Q6IEG0 339 aaKnown RBP15.24■□□□□ 0.03
PDLIM4-203ENST00000418373 PRPF38AQ8NAV1 312 aaKnown RBP15.24■□□□□ 0.03
PDLIM4-203ENST00000418373 MKL1Q969V6 931 aa15.24■□□□□ 0.03
PDLIM4-203ENST00000418373 MKNK2Q9HBH9 465 aa15.24■□□□□ 0.03
PDLIM4-203ENST00000418373 SYNPO2Q9UMS6 1093 aa15.24■□□□□ 0.03
PDLIM4-203ENST00000418373 LRRC37A2A6NM11 1700 aa15.23■□□□□ 0.03
PDLIM4-203ENST00000418373 SYNRGQ9UMZ2 1314 aa15.23■□□□□ 0.03
PDLIM4-203ENST00000418373 KIAA0355O15063 1070 aa15.23■□□□□ 0.03
PDLIM4-203ENST00000418373 GNAT2P19087 354 aa15.23■□□□□ 0.03
PDLIM4-203ENST00000418373 CCSAPQ6IQ19 270 aaPredicted RBP15.23■□□□□ 0.03
PDLIM4-203ENST00000418373 ZNF467Q7Z7K2 595 aaPredicted RBP15.23■□□□□ 0.03
PDLIM4-203ENST00000418373 STK11IPQ8N1F8 1099 aa15.23■□□□□ 0.03
PDLIM4-203ENST00000418373 CEP95Q96GE4 821 aa15.23■□□□□ 0.03
PDLIM4-203ENST00000418373 FGD4Q96M96 766 aa15.23■□□□□ 0.03
PDLIM4-203ENST00000418373 SLC38A10Q9HBR0 1119 aa15.23■□□□□ 0.03
PDLIM4-203ENST00000418373 CNPY2Q9Y2B0 182 aa15.23■□□□□ 0.03
PDLIM4-203ENST00000418373 TACC3Q9Y6A5 838 aa15.23■□□□□ 0.03
PDLIM4-203ENST00000418373 LCTP09848 1927 aa15.22■□□□□ 0.03
PDLIM4-203ENST00000418373 CLTBP09497 229 aa15.22■□□□□ 0.03
PDLIM4-203ENST00000418373 SMAD3P84022 425 aaKnown RBP15.22■□□□□ 0.03
PDLIM4-203ENST00000418373 ZNF697Q5TEC3 545 aa15.22■□□□□ 0.03
PDLIM4-203ENST00000418373 ANKRD33Q7Z3H0 272 aa15.22■□□□□ 0.03
PDLIM4-203ENST00000418373 GMCL1P1Q8NEA9 526 aa15.22■□□□□ 0.03
PDLIM4-203ENST00000418373 KLHDC9Q8NEP7 349 aa15.22■□□□□ 0.03
PDLIM4-203ENST00000418373 GPATCH3Q96I76 525 aa15.22■□□□□ 0.03
PDLIM4-203ENST00000418373 FAM161BQ96MY7 647 aa15.22■□□□□ 0.03
PDLIM4-203ENST00000418373 TSEN34Q9BSV6 310 aaKnown RBP15.22■□□□□ 0.03
PDLIM4-203ENST00000418373 MTMR4Q9NYA4 1195 aa15.22■□□□□ 0.03
PDLIM4-203ENST00000418373 CLIP2Q9UDT6 1046 aa15.22■□□□□ 0.03
PDLIM4-203ENST00000418373 TTC28Q96AY4 2481 aa15.22■□□□□ 0.03
PDLIM4-203ENST00000418373 ADCY6O43306 1168 aa15.21■□□□□ 0.03
PDLIM4-203ENST00000418373 PRDM1O75626 825 aa15.21■□□□□ 0.03
PDLIM4-203ENST00000418373 TDO2P48775 406 aa15.21■□□□□ 0.03
PDLIM4-203ENST00000418373 ACLYP53396 1101 aa15.21■□□□□ 0.03
PDLIM4-203ENST00000418373 EPHB4P54760 987 aa15.21■□□□□ 0.03
PDLIM4-203ENST00000418373 IFNL3Q8IZI9 196 aa15.21■□□□□ 0.03
PDLIM4-203ENST00000418373 PI4K2BQ8TCG2 481 aa15.21■□□□□ 0.03
PDLIM4-203ENST00000418373 TOX2Q96NM4 488 aa15.21■□□□□ 0.03
PDLIM4-203ENST00000418373 CHD9Q3L8U1 2897 aa15.2■□□□□ 0.02
PDLIM4-203ENST00000418373 MUC3AQ02505 3323 aa15.2■□□□□ 0.02
PDLIM4-203ENST00000418373 MYADML2A6NDP7 307 aa15.2■□□□□ 0.02
PDLIM4-203ENST00000418373 MOXD2PA6NHM9 499 aa15.2■□□□□ 0.02
PDLIM4-203ENST00000418373 PATL2C9JE40 543 aaKnown RBP15.2■□□□□ 0.02
PDLIM4-203ENST00000418373 PQBP1O60828 265 aaKnown RBP15.2■□□□□ 0.02
PDLIM4-203ENST00000418373 DUSP11O75319 330 aaKnown RBP15.2■□□□□ 0.02
PDLIM4-203ENST00000418373 TTLL1O95922 423 aa15.2■□□□□ 0.02
PDLIM4-203ENST00000418373 CST5P28325 142 aaPredicted RBP15.2■□□□□ 0.02
PDLIM4-203ENST00000418373 OAZ1P54368 228 aa15.2■□□□□ 0.02
PDLIM4-203ENST00000418373 FAAP100Q0VG06 881 aa15.2■□□□□ 0.02
PDLIM4-203ENST00000418373 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.2■□□□□ 0.02
PDLIM4-203ENST00000418373 CPXCR1Q8N123 301 aa15.2■□□□□ 0.02
PDLIM4-203ENST00000418373 LRRC47Q8N1G4 583 aaKnown RBP15.2■□□□□ 0.02
PDLIM4-203ENST00000418373 NEDD1Q8NHV4 660 aa15.2■□□□□ 0.02
PDLIM4-203ENST00000418373 DDX11Q96FC9 970 aa15.2■□□□□ 0.02
PDLIM4-203ENST00000418373 CDX2Q99626 313 aaPredicted RBP15.2■□□□□ 0.02
PDLIM4-203ENST00000418373 TTYH1Q9H313 450 aaPredicted RBP15.2■□□□□ 0.02
PDLIM4-203ENST00000418373 SEMA6BQ9H3T3 888 aa15.2■□□□□ 0.02
PDLIM4-203ENST00000418373 ZNF287Q9HBT7 754 aa15.2■□□□□ 0.02
PDLIM4-203ENST00000418373 RAVER2Q9HCJ3 691 aaKnown RBP15.2■□□□□ 0.02
PDLIM4-203ENST00000418373 FEM1BQ9UK73 627 aa15.2■□□□□ 0.02
PDLIM4-203ENST00000418373 FAM184BQ9ULE4 1060 aa15.2■□□□□ 0.02
PDLIM4-203ENST00000418373 TTC41PQ6P2S7 1318 aa15.19■□□□□ 0.02
PDLIM4-203ENST00000418373 ZBED4O75132 1171 aa15.19■□□□□ 0.02
PDLIM4-203ENST00000418373 ZNF444Q8N0Y2 327 aaPredicted RBP15.19■□□□□ 0.02
PDLIM4-203ENST00000418373 CHST13Q8NET6 341 aa15.19■□□□□ 0.02
PDLIM4-203ENST00000418373 KIFC2Q96AC6 838 aa15.19■□□□□ 0.02
PDLIM4-203ENST00000418373 SEC62Q99442 399 aaKnown RBP15.19■□□□□ 0.02
PDLIM4-203ENST00000418373 KATNBL1Q9H079 304 aa15.19■□□□□ 0.02
PDLIM4-203ENST00000418373 UPF3AQ9H1J1 476 aaKnown RBP15.19■□□□□ 0.02
PDLIM4-203ENST00000418373 STARD7Q9NQZ5 370 aa15.19■□□□□ 0.02
PDLIM4-203ENST00000418373 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.19■□□□□ 0.02
PDLIM4-203ENST00000418373 FOXP2O15409 715 aa15.18■□□□□ 0.02
PDLIM4-203ENST00000418373 APPP05067 770 aa15.18■□□□□ 0.02
PDLIM4-203ENST00000418373 IRX5P78411 483 aaPredicted RBP15.18■□□□□ 0.02
PDLIM4-203ENST00000418373 ACVR2BQ13705 512 aa15.18■□□□□ 0.02
PDLIM4-203ENST00000418373 KCNA10Q16322 511 aa15.18■□□□□ 0.02
PDLIM4-203ENST00000418373 OTUD7AQ8TE49 926 aaPredicted RBP15.18■□□□□ 0.02
PDLIM4-203ENST00000418373 NUP133Q8WUM0 1156 aa15.18■□□□□ 0.02
PDLIM4-203ENST00000418373 COL25A1Q9BXS0 654 aaPredicted RBP15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms