RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 LMAN1P49257 510 aa13.4□□□□□ -0.26
LIMK1-202ENST00000418310 MRPS25P82663 173 aaKnown RBP13.4□□□□□ -0.26
LIMK1-202ENST00000418310 PFKFB3Q16875 520 aaPredicted RBP13.4□□□□□ -0.26
LIMK1-202ENST00000418310 RSRC2Q7L4I2 434 aaKnown RBP13.4□□□□□ -0.26
LIMK1-202ENST00000418310 SRGAP1Q7Z6B7 1085 aa13.4□□□□□ -0.26
LIMK1-202ENST00000418310 SH3RF3Q8TEJ3 882 aaPredicted RBP13.4□□□□□ -0.26
LIMK1-202ENST00000418310 DRC1Q96MC2 740 aa13.4□□□□□ -0.26
LIMK1-202ENST00000418310 PDE11AQ9HCR9 933 aa13.4□□□□□ -0.26
LIMK1-202ENST00000418310 TTC26A0AVF1 554 aa13.4□□□□□ -0.26
LIMK1-202ENST00000418310 H3BQF6 201 aa13.4□□□□□ -0.26
LIMK1-202ENST00000418310 NKRFO15226 690 aaKnown RBP eCLIP13.4□□□□□ -0.26
LIMK1-202ENST00000418310 PARP1P09874 1014 aaKnown RBP13.4□□□□□ -0.26
LIMK1-202ENST00000418310 RCSD1Q6JBY9 416 aa13.4□□□□□ -0.26
LIMK1-202ENST00000418310 DTHD1Q6ZMT9 781 aa13.4□□□□□ -0.26
LIMK1-202ENST00000418310 NOA1Q8NC60 698 aaKnown RBP13.4□□□□□ -0.26
LIMK1-202ENST00000418310 NLRP3Q96P20 1036 aa13.4□□□□□ -0.26
LIMK1-202ENST00000418310 GTPBP6O43824 516 aaPredicted RBP13.39□□□□□ -0.27
LIMK1-202ENST00000418310 EIF6P56537 245 aaKnown RBP13.39□□□□□ -0.27
LIMK1-202ENST00000418310 IL17RBQ9NRM6 502 aa13.39□□□□□ -0.27
LIMK1-202ENST00000418310 CDC23Q9UJX2 597 aa13.39□□□□□ -0.27
LIMK1-202ENST00000418310 XIRP1Q702N8 1843 aaKnown RBP13.39□□□□□ -0.27
LIMK1-202ENST00000418310 MYH13Q9UKX3 1938 aa13.39□□□□□ -0.27
LIMK1-202ENST00000418310 GNPATO15228 680 aa13.39□□□□□ -0.27
LIMK1-202ENST00000418310 PBX1P40424 430 aa13.39□□□□□ -0.27
LIMK1-202ENST00000418310 RABGGTAQ92696 567 aa13.39□□□□□ -0.27
LIMK1-202ENST00000418310 VPS18Q9P253 973 aa13.39□□□□□ -0.27
LIMK1-202ENST00000418310 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.39□□□□□ -0.27
LIMK1-202ENST00000418310 NID2Q14112 1375 aa13.39□□□□□ -0.27
LIMK1-202ENST00000418310 BMP15O95972 392 aa13.38□□□□□ -0.27
LIMK1-202ENST00000418310 CCDC102AQ96A19 550 aa13.38□□□□□ -0.27
LIMK1-202ENST00000418310 SETDB2Q96T68 719 aa13.38□□□□□ -0.27
LIMK1-202ENST00000418310 ANKZF1Q9H8Y5 726 aa13.38□□□□□ -0.27
LIMK1-202ENST00000418310 ABCB6Q9NP58 842 aa13.38□□□□□ -0.27
LIMK1-202ENST00000418310 KIF5BP33176 963 aa13.38□□□□□ -0.27
LIMK1-202ENST00000418310 HNRNPH2P55795 449 aaKnown RBP13.38□□□□□ -0.27
LIMK1-202ENST00000418310 VSNL1P62760 191 aa13.38□□□□□ -0.27
LIMK1-202ENST00000418310 PIP4K2BP78356 416 aa13.38□□□□□ -0.27
LIMK1-202ENST00000418310 CYP27A1Q02318 531 aa13.38□□□□□ -0.27
LIMK1-202ENST00000418310 FKBP15Q5T1M5 1219 aa13.38□□□□□ -0.27
LIMK1-202ENST00000418310 ZNF658Q5TYW1 1059 aaPredicted RBP13.38□□□□□ -0.27
LIMK1-202ENST00000418310 ELOA2Q8IYF1 753 aaPredicted RBP13.38□□□□□ -0.27
LIMK1-202ENST00000418310 LRRC15Q8TF66 581 aa13.38□□□□□ -0.27
LIMK1-202ENST00000418310 PSMB7Q99436 277 aa13.38□□□□□ -0.27
LIMK1-202ENST00000418310 NAPGQ99747 312 aaPredicted RBP13.38□□□□□ -0.27
LIMK1-202ENST00000418310 FUT8Q9BYC5 575 aa13.38□□□□□ -0.27
LIMK1-202ENST00000418310 UBA5Q9GZZ9 404 aa13.38□□□□□ -0.27
LIMK1-202ENST00000418310 MYH8P13535 1937 aa13.38□□□□□ -0.27
LIMK1-202ENST00000418310 DISP2A7MBM2 1401 aa13.38□□□□□ -0.27
LIMK1-202ENST00000418310 RAD21O60216 631 aa13.38□□□□□ -0.27
LIMK1-202ENST00000418310 ATP2B2Q01814 1243 aa13.38□□□□□ -0.27
LIMK1-202ENST00000418310 PPP2R5BQ15173 497 aa13.38□□□□□ -0.27
LIMK1-202ENST00000418310 USP17L2Q6R6M4 530 aa13.38□□□□□ -0.27
LIMK1-202ENST00000418310 ZNF444Q8N0Y2 327 aaPredicted RBP13.38□□□□□ -0.27
LIMK1-202ENST00000418310 DISC1Q9NRI5 854 aa13.38□□□□□ -0.27
LIMK1-202ENST00000418310 AGPAT5Q9NUQ2 364 aa13.38□□□□□ -0.27
LIMK1-202ENST00000418310 RWDD2AQ9UIY3 292 aa13.38□□□□□ -0.27
LIMK1-202ENST00000418310 MYH14Q7Z406 1995 aaKnown RBP13.38□□□□□ -0.27
LIMK1-202ENST00000418310 MACROD2A1Z1Q3 448 aa13.37□□□□□ -0.27
LIMK1-202ENST00000418310 CYTH3O43739 400 aa13.37□□□□□ -0.27
LIMK1-202ENST00000418310 CCNT1O60563 726 aaKnown RBP13.37□□□□□ -0.27
LIMK1-202ENST00000418310 FCER1AP12319 257 aa13.37□□□□□ -0.27
LIMK1-202ENST00000418310 TRIM21P19474 475 aaKnown RBP13.37□□□□□ -0.27
LIMK1-202ENST00000418310 ASIC1P78348 528 aa13.37□□□□□ -0.27
LIMK1-202ENST00000418310 SLC35G1Q2M3R5 365 aa13.37□□□□□ -0.27
LIMK1-202ENST00000418310 CYP26C1Q6V0L0 522 aa13.37□□□□□ -0.27
LIMK1-202ENST00000418310 GSPT2Q8IYD1 628 aaKnown RBP13.37□□□□□ -0.27
LIMK1-202ENST00000418310 MAGEC2Q9UBF1 373 aaPredicted RBP13.37□□□□□ -0.27
LIMK1-202ENST00000418310 CCDC66A2RUB6 948 aa13.37□□□□□ -0.27
LIMK1-202ENST00000418310 CTAGE15A4D2H0 777 aa13.37□□□□□ -0.27
LIMK1-202ENST00000418310 CTAGE8P0CG41 777 aa13.37□□□□□ -0.27
LIMK1-202ENST00000418310 TECP42680 631 aa13.37□□□□□ -0.27
LIMK1-202ENST00000418310 TNNT3P45378 269 aaPredicted RBP13.37□□□□□ -0.27
LIMK1-202ENST00000418310 RCAN1P53805 252 aa13.37□□□□□ -0.27
LIMK1-202ENST00000418310 NAPAP54920 295 aa13.37□□□□□ -0.27
LIMK1-202ENST00000418310 TSR1Q2NL82 804 aaKnown RBP13.37□□□□□ -0.27
LIMK1-202ENST00000418310 NAALADL2Q58DX5 795 aa13.37□□□□□ -0.27
LIMK1-202ENST00000418310 KIAA1328Q86T90 577 aa13.37□□□□□ -0.27
LIMK1-202ENST00000418310 CTAGE6Q86UF2 777 aa13.37□□□□□ -0.27
LIMK1-202ENST00000418310 AMIGO3Q86WK7 504 aa13.37□□□□□ -0.27
LIMK1-202ENST00000418310 CTAGE4Q8IX94 777 aa13.37□□□□□ -0.27
LIMK1-202ENST00000418310 DNA2P51530 1060 aa13.37□□□□□ -0.27
LIMK1-202ENST00000418310 FAM193AP78312 1265 aa13.37□□□□□ -0.27
LIMK1-202ENST00000418310 CCDC122Q5T0U0 273 aa13.37□□□□□ -0.27
LIMK1-202ENST00000418310 FBXO33Q7Z6M2 555 aa13.37□□□□□ -0.27
LIMK1-202ENST00000418310 IRF2BP1Q8IU81 584 aa13.37□□□□□ -0.27
LIMK1-202ENST00000418310 CLEC10AQ8IUN9 316 aa13.37□□□□□ -0.27
LIMK1-202ENST00000418310 TMTC1Q8IUR5 882 aa13.37□□□□□ -0.27
LIMK1-202ENST00000418310 CSGALNACT2Q8N6G5 542 aa13.37□□□□□ -0.27
LIMK1-202ENST00000418310 LUC7L2Q9Y383 392 aaKnown RBP13.37□□□□□ -0.27
LIMK1-202ENST00000418310 EPN1Q9Y6I3 576 aaPredicted RBP13.37□□□□□ -0.27
LIMK1-202ENST00000418310 DUSP10Q9Y6W6 482 aa13.37□□□□□ -0.27
LIMK1-202ENST00000418310 SRCAPQ6ZRS2 3230 aa13.36□□□□□ -0.27
LIMK1-202ENST00000418310 MTIF2P46199 727 aaKnown RBP13.36□□□□□ -0.27
LIMK1-202ENST00000418310 PDE4DQ08499 809 aa13.36□□□□□ -0.27
LIMK1-202ENST00000418310 NFIXQ14938 502 aa13.36□□□□□ -0.27
LIMK1-202ENST00000418310 DYMQ7RTS9 669 aa13.36□□□□□ -0.27
LIMK1-202ENST00000418310 MTA3Q9BTC8 594 aa13.36□□□□□ -0.27
LIMK1-202ENST00000418310 PCDHA4Q9UN74 947 aa13.36□□□□□ -0.27
LIMK1-202ENST00000418310 ANKRD36CQ5JPF3 1778 aa13.36□□□□□ -0.27
LIMK1-202ENST00000418310 DUOX1Q9NRD9 1551 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms