RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 KCNJ18B7U540 433 aa8.96□□□□□ -0.98
HMGXB4-202ENST00000418170 RNMTO43148 476 aaKnown RBP8.96□□□□□ -0.98
HMGXB4-202ENST00000418170 IBSPP21815 317 aaPredicted RBP8.96□□□□□ -0.98
HMGXB4-202ENST00000418170 CASP1P29466 404 aa8.96□□□□□ -0.98
HMGXB4-202ENST00000418170 PIP4K2AP48426 406 aaPredicted RBP8.96□□□□□ -0.98
HMGXB4-202ENST00000418170 INHBEP58166 350 aa8.96□□□□□ -0.98
HMGXB4-202ENST00000418170 TIMM10P62072 90 aa8.96□□□□□ -0.98
HMGXB4-202ENST00000418170 BIRC2Q13490 618 aa8.96□□□□□ -0.98
HMGXB4-202ENST00000418170 KCNJ12Q14500 433 aa8.96□□□□□ -0.98
HMGXB4-202ENST00000418170 MICU3Q86XE3 530 aa8.96□□□□□ -0.98
HMGXB4-202ENST00000418170 DIS3L2Q8IYB7 885 aaKnown RBP8.96□□□□□ -0.98
HMGXB4-202ENST00000418170 CEP131Q9UPN4 1083 aa8.96□□□□□ -0.98
HMGXB4-202ENST00000418170 PRLRP16471 622 aa8.95□□□□□ -0.98
HMGXB4-202ENST00000418170 SLC7A5Q01650 507 aa8.95□□□□□ -0.98
HMGXB4-202ENST00000418170 UBXN1Q04323 297 aa8.95□□□□□ -0.98
HMGXB4-202ENST00000418170 IFFO1Q0D2I5 559 aa8.95□□□□□ -0.98
HMGXB4-202ENST00000418170 SAFBQ15424 915 aaKnown RBP eCLIP8.95□□□□□ -0.98
HMGXB4-202ENST00000418170 MEA1Q16626 185 aa8.95□□□□□ -0.98
HMGXB4-202ENST00000418170 RCSD1Q6JBY9 416 aa8.95□□□□□ -0.98
HMGXB4-202ENST00000418170 CD302Q8IX05 232 aa8.95□□□□□ -0.98
HMGXB4-202ENST00000418170 MAB21L3Q8N8X9 362 aa8.95□□□□□ -0.98
HMGXB4-202ENST00000418170 FOXP1Q9H334 677 aaPredicted RBP8.95□□□□□ -0.98
HMGXB4-202ENST00000418170 POLD4Q9HCU8 107 aa8.95□□□□□ -0.98
HMGXB4-202ENST00000418170 FAM217BQ9NTX9 383 aaPredicted RBP8.95□□□□□ -0.98
HMGXB4-202ENST00000418170 AATFQ9NY61 560 aaKnown RBP eCLIP8.95□□□□□ -0.98
HMGXB4-202ENST00000418170 RWDD2AQ9UIY3 292 aa8.95□□□□□ -0.98
HMGXB4-202ENST00000418170 CAPN11Q9UMQ6 739 aa8.95□□□□□ -0.98
HMGXB4-202ENST00000418170 COL16A1Q07092 1604 aaPredicted RBP8.95□□□□□ -0.98
HMGXB4-202ENST00000418170 UBE2Q2LH0YL09 131 aa8.95□□□□□ -0.98
HMGXB4-202ENST00000418170 ZBTB43O43298 467 aa8.95□□□□□ -0.98
HMGXB4-202ENST00000418170 CCNHP51946 323 aaPredicted RBP8.95□□□□□ -0.98
HMGXB4-202ENST00000418170 TSR1Q2NL82 804 aaKnown RBP8.95□□□□□ -0.98
HMGXB4-202ENST00000418170 HAUS3Q68CZ6 603 aa8.95□□□□□ -0.98
HMGXB4-202ENST00000418170 C3orf20Q8ND61 904 aa8.95□□□□□ -0.98
HMGXB4-202ENST00000418170 CYFIP2Q96F07 1278 aa8.95□□□□□ -0.98
HMGXB4-202ENST00000418170 SCLT1Q96NL6 688 aa8.95□□□□□ -0.98
HMGXB4-202ENST00000418170 MYH7P12883 1935 aa8.95□□□□□ -0.98
HMGXB4-202ENST00000418170 DNM1LO00429 736 aa8.95□□□□□ -0.98
HMGXB4-202ENST00000418170 CYLC1P35663 651 aaPredicted RBP8.95□□□□□ -0.98
HMGXB4-202ENST00000418170 CFAP58Q5T655 872 aa8.95□□□□□ -0.98
HMGXB4-202ENST00000418170 CYB5R4Q7L1T6 521 aa8.95□□□□□ -0.98
HMGXB4-202ENST00000418170 ATG9AQ7Z3C6 839 aa8.95□□□□□ -0.98
HMGXB4-202ENST00000418170 ZNF483Q8TF39 744 aaPredicted RBP8.95□□□□□ -0.98
HMGXB4-202ENST00000418170 OSBPL7Q9BZF2 842 aa8.95□□□□□ -0.98
HMGXB4-202ENST00000418170 IQSEC3Q9UPP2 1182 aaPredicted RBP8.95□□□□□ -0.98
HMGXB4-202ENST00000418170 MYH10P35580 1976 aa8.95□□□□□ -0.98
HMGXB4-202ENST00000418170 E7EVH7 732 aa8.94□□□□□ -0.98
HMGXB4-202ENST00000418170 ZFYP08048 801 aaPredicted RBP8.94□□□□□ -0.98
HMGXB4-202ENST00000418170 PPARAQ07869 468 aa8.94□□□□□ -0.98
HMGXB4-202ENST00000418170 XRCC4Q13426 336 aa8.94□□□□□ -0.98
HMGXB4-202ENST00000418170 WASHC4Q2M389 1173 aa8.94□□□□□ -0.98
HMGXB4-202ENST00000418170 ANKRD20A8PQ5CZ79 823 aa8.94□□□□□ -0.98
HMGXB4-202ENST00000418170 PPP4R3AQ6IN85 833 aa8.94□□□□□ -0.98
HMGXB4-202ENST00000418170 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.94□□□□□ -0.98
HMGXB4-202ENST00000418170 WASF1Q92558 559 aa8.94□□□□□ -0.98
HMGXB4-202ENST00000418170 SLC26A6Q9BXS9 759 aa8.94□□□□□ -0.98
HMGXB4-202ENST00000418170 HAUS2Q9NVX0 235 aa8.94□□□□□ -0.98
HMGXB4-202ENST00000418170 LAMB4A4D0S4 1761 aa8.94□□□□□ -0.98
HMGXB4-202ENST00000418170 A0A1W2PQC6 194 aa8.94□□□□□ -0.98
HMGXB4-202ENST00000418170 FRMD3A2A2Y4 597 aa8.94□□□□□ -0.98
HMGXB4-202ENST00000418170 HMGB1P1B2RPK0 211 aaPredicted RBP8.94□□□□□ -0.98
HMGXB4-202ENST00000418170 COBLO75128 1261 aa8.94□□□□□ -0.98
HMGXB4-202ENST00000418170 IPO7O95373 1038 aaKnown RBP8.94□□□□□ -0.98
HMGXB4-202ENST00000418170 FMNL1O95466 1100 aaPredicted RBP8.94□□□□□ -0.98
HMGXB4-202ENST00000418170 VAV2P52735 878 aa8.94□□□□□ -0.98
HMGXB4-202ENST00000418170 SSRP1Q08945 709 aaKnown RBP8.94□□□□□ -0.98
HMGXB4-202ENST00000418170 ITGB3BPQ13352 177 aaPredicted RBP8.94□□□□□ -0.98
HMGXB4-202ENST00000418170 NAA25Q14CX7 972 aa8.94□□□□□ -0.98
HMGXB4-202ENST00000418170 E2F5Q15329 346 aa8.94□□□□□ -0.98
HMGXB4-202ENST00000418170 GLE1Q53GS7 698 aaKnown RBP8.94□□□□□ -0.98
HMGXB4-202ENST00000418170 ANKLE2Q86XL3 938 aa8.94□□□□□ -0.98
HMGXB4-202ENST00000418170 MREGQ8N565 214 aa8.94□□□□□ -0.98
HMGXB4-202ENST00000418170 ATP6V1G3Q96LB4 118 aa8.94□□□□□ -0.98
HMGXB4-202ENST00000418170 CCDC43Q96MW1 224 aaKnown RBP8.94□□□□□ -0.98
HMGXB4-202ENST00000418170 SENP2Q9HC62 589 aa8.94□□□□□ -0.98
HMGXB4-202ENST00000418170 DENND2AQ9ULE3 1009 aa8.94□□□□□ -0.98
HMGXB4-202ENST00000418170 TBC1D2BQ9UPU7 963 aa8.94□□□□□ -0.98
HMGXB4-202ENST00000418170 DUSP10Q9Y6W6 482 aa8.94□□□□□ -0.98
HMGXB4-202ENST00000418170 ANKRD18BA2A2Z9 1011 aa8.94□□□□□ -0.98
HMGXB4-202ENST00000418170 GOLGA8AA7E2F4 631 aa8.94□□□□□ -0.98
HMGXB4-202ENST00000418170 SSBP05455 408 aaKnown RBP eCLIP8.94□□□□□ -0.98
HMGXB4-202ENST00000418170 PAK1Q13153 545 aa8.94□□□□□ -0.98
HMGXB4-202ENST00000418170 SPRED3Q2MJR0 410 aa8.94□□□□□ -0.98
HMGXB4-202ENST00000418170 TAX1BP1Q86VP1 789 aa8.94□□□□□ -0.98
HMGXB4-202ENST00000418170 CCDC170Q8IYT3 715 aa8.94□□□□□ -0.98
HMGXB4-202ENST00000418170 MB21D1Q8N884 522 aa8.94□□□□□ -0.98
HMGXB4-202ENST00000418170 ARMC2Q8NEN0 867 aa8.94□□□□□ -0.98
HMGXB4-202ENST00000418170 TRIM58Q8NG06 486 aa8.94□□□□□ -0.98
HMGXB4-202ENST00000418170 XAGE3Q8WTP9 111 aa8.94□□□□□ -0.98
HMGXB4-202ENST00000418170 EPSTI1Q96J88 318 aa8.94□□□□□ -0.98
HMGXB4-202ENST00000418170 MACROD2A1Z1Q3 448 aa8.94□□□□□ -0.98
HMGXB4-202ENST00000418170 MGRN1O60291 552 aa8.94□□□□□ -0.98
HMGXB4-202ENST00000418170 GBP2P32456 591 aaPredicted RBP8.94□□□□□ -0.98
HMGXB4-202ENST00000418170 MRPS25P82663 173 aaKnown RBP8.94□□□□□ -0.98
HMGXB4-202ENST00000418170 NKX2-3Q8TAU0 364 aa8.94□□□□□ -0.98
HMGXB4-202ENST00000418170 PIK3R5Q8WYR1 880 aa8.94□□□□□ -0.98
HMGXB4-202ENST00000418170 HOOK2Q96ED9 719 aa8.94□□□□□ -0.98
HMGXB4-202ENST00000418170 BATF3Q9NR55 127 aa8.94□□□□□ -0.98
HMGXB4-202ENST00000418170 COL22A1Q8NFW1 1626 aaPredicted RBP8.93□□□□□ -0.98
HMGXB4-202ENST00000418170 LGALS16A8MUM7 142 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms