RNA–Protein interactions for RNA: ENST00000418107.2

HLA-DMB-258, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

APPRIS P1 BASIC

Gene HLA-DMB, Length 1,397 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-258ENST00000418107 CPLX1O14810 134 aa15.34■□□□□ 0.05
HLA-DMB-258ENST00000418107 CYP2B6P20813 491 aa15.34■□□□□ 0.05
HLA-DMB-258ENST00000418107 BMP8BP34820 402 aa15.34■□□□□ 0.05
HLA-DMB-258ENST00000418107 IRX3P78415 501 aaPredicted RBP15.34■□□□□ 0.05
HLA-DMB-258ENST00000418107 ST3GAL1Q11201 340 aa15.34■□□□□ 0.05
HLA-DMB-258ENST00000418107 SCRN1Q12765 414 aa15.34■□□□□ 0.05
HLA-DMB-258ENST00000418107 TTC6Q86TZ1 520 aa15.34■□□□□ 0.05
HLA-DMB-258ENST00000418107 RAB11FIP4Q86YS3 637 aa15.34■□□□□ 0.05
HLA-DMB-258ENST00000418107 FAM184AQ8NB25 1140 aa15.34■□□□□ 0.05
HLA-DMB-258ENST00000418107 TNPO1Q92973 898 aaKnown RBP15.34■□□□□ 0.05
HLA-DMB-258ENST00000418107 DYNLL2Q96FJ2 89 aa15.34■□□□□ 0.05
HLA-DMB-258ENST00000418107 GBP4Q96PP9 640 aa15.34■□□□□ 0.05
HLA-DMB-258ENST00000418107 LLPHQ9BRT6 129 aaKnown RBP15.34■□□□□ 0.05
HLA-DMB-258ENST00000418107 MTA3Q9BTC8 594 aa15.34■□□□□ 0.05
HLA-DMB-258ENST00000418107 C11orf49Q9H6J7 331 aa15.34■□□□□ 0.05
HLA-DMB-258ENST00000418107 LY9Q9HBG7 655 aa15.34■□□□□ 0.05
HLA-DMB-258ENST00000418107 HERC5Q9UII4 1024 aaKnown RBP15.34■□□□□ 0.05
HLA-DMB-258ENST00000418107 BRPF3Q9ULD4 1205 aa15.34■□□□□ 0.05
HLA-DMB-258ENST00000418107 KIF3AQ9Y496 699 aa15.34■□□□□ 0.05
HLA-DMB-258ENST00000418107 SLC12A7Q9Y666 1083 aa15.34■□□□□ 0.05
HLA-DMB-258ENST00000418107 ZBTB43O43298 467 aa15.33■□□□□ 0.04
HLA-DMB-258ENST00000418107 DTNBO60941 627 aa15.33■□□□□ 0.04
HLA-DMB-258ENST00000418107 FGRP09769 529 aa15.33■□□□□ 0.04
HLA-DMB-258ENST00000418107 PDCP20941 246 aa15.33■□□□□ 0.04
HLA-DMB-258ENST00000418107 LIFRP42702 1097 aa15.33■□□□□ 0.04
HLA-DMB-258ENST00000418107 EVCP57679 992 aa15.33■□□□□ 0.04
HLA-DMB-258ENST00000418107 JAG1P78504 1218 aa15.33■□□□□ 0.04
HLA-DMB-258ENST00000418107 EVX2Q03828 476 aa15.33■□□□□ 0.04
HLA-DMB-258ENST00000418107 CPLX2Q6PUV4 134 aaKnown RBP15.33■□□□□ 0.04
HLA-DMB-258ENST00000418107 ZSCAN10Q96SZ4 725 aaPredicted RBP15.33■□□□□ 0.04
HLA-DMB-258ENST00000418107 P2RX7Q99572 595 aaKnown RBP15.33■□□□□ 0.04
HLA-DMB-258ENST00000418107 NCOA5Q9HCD5 579 aaKnown RBP15.33■□□□□ 0.04
HLA-DMB-258ENST00000418107 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.33■□□□□ 0.04
HLA-DMB-258ENST00000418107 DDX60LQ5H9U9 1706 aaKnown RBP15.33■□□□□ 0.04
HLA-DMB-258ENST00000418107 PLXNB2O15031 1838 aa15.32■□□□□ 0.04
HLA-DMB-258ENST00000418107 SIPA1L1O43166 1804 aa15.32■□□□□ 0.04
HLA-DMB-258ENST00000418107 GOLGA8AA7E2F4 631 aa15.32■□□□□ 0.04
HLA-DMB-258ENST00000418107 HLA-DOAP06340 250 aa15.32■□□□□ 0.04
HLA-DMB-258ENST00000418107 PRKAR2AP13861 404 aaKnown RBP15.32■□□□□ 0.04
HLA-DMB-258ENST00000418107 METAP2P50579 478 aaKnown RBP eCLIP15.32■□□□□ 0.04
HLA-DMB-258ENST00000418107 PLCD1P51178 756 aa15.32■□□□□ 0.04
HLA-DMB-258ENST00000418107 BACE1P56817 501 aa15.32■□□□□ 0.04
HLA-DMB-258ENST00000418107 HMGN5P82970 282 aaKnown RBP15.32■□□□□ 0.04
HLA-DMB-258ENST00000418107 SHROOM1Q2M3G4 852 aaPredicted RBP15.32■□□□□ 0.04
HLA-DMB-258ENST00000418107 FAM47AQ5JRC9 791 aa15.32■□□□□ 0.04
HLA-DMB-258ENST00000418107 IFIT1BQ5T764 474 aaKnown RBP15.32■□□□□ 0.04
HLA-DMB-258ENST00000418107 MAP3K21Q5TCX8 1036 aa15.32■□□□□ 0.04
HLA-DMB-258ENST00000418107 LARP1BQ659C4 914 aaKnown RBP15.32■□□□□ 0.04
HLA-DMB-258ENST00000418107 SGMS1Q86VZ5 419 aa15.32■□□□□ 0.04
HLA-DMB-258ENST00000418107 MICU3Q86XE3 530 aa15.32■□□□□ 0.04
HLA-DMB-258ENST00000418107 DDX11Q96FC9 970 aa15.32■□□□□ 0.04
HLA-DMB-258ENST00000418107 WDR18Q9BV38 432 aa15.32■□□□□ 0.04
HLA-DMB-258ENST00000418107 TXNRD2Q9NNW7 524 aa15.32■□□□□ 0.04
HLA-DMB-258ENST00000418107 TMOD4Q9NZQ9 345 aa15.32■□□□□ 0.04
HLA-DMB-258ENST00000418107 PI4KBQ9UBF8 816 aa15.32■□□□□ 0.04
HLA-DMB-258ENST00000418107 OGDHLQ9ULD0 1010 aa15.32■□□□□ 0.04
HLA-DMB-258ENST00000418107 TNKSO95271 1327 aa15.31■□□□□ 0.04
HLA-DMB-258ENST00000418107 STX6O43752 255 aa15.31■□□□□ 0.04
HLA-DMB-258ENST00000418107 ASNSP08243 561 aa15.31■□□□□ 0.04
HLA-DMB-258ENST00000418107 TSPY3P0CV98 308 aa15.31■□□□□ 0.04
HLA-DMB-258ENST00000418107 TSPY8P0CW00 308 aa15.31■□□□□ 0.04
HLA-DMB-258ENST00000418107 MAGEA10P43363 369 aaPredicted RBP15.31■□□□□ 0.04
HLA-DMB-258ENST00000418107 CDK8P49336 464 aa15.31■□□□□ 0.04
HLA-DMB-258ENST00000418107 NT5C2P49902 561 aa15.31■□□□□ 0.04
HLA-DMB-258ENST00000418107 HERVK_113P62684 666 aa15.31■□□□□ 0.04
HLA-DMB-258ENST00000418107 TFAP4Q01664 338 aa15.31■□□□□ 0.04
HLA-DMB-258ENST00000418107 PKP1Q13835 747 aa15.31■□□□□ 0.04
HLA-DMB-258ENST00000418107 CCDC178Q5BJE1 867 aa15.31■□□□□ 0.04
HLA-DMB-258ENST00000418107 DEFB123Q8N688 67 aa15.31■□□□□ 0.04
HLA-DMB-258ENST00000418107 NUDT12Q9BQG2 462 aa15.31■□□□□ 0.04
HLA-DMB-258ENST00000418107 DNAJC18Q9H819 358 aa15.31■□□□□ 0.04
HLA-DMB-258ENST00000418107 SENP2Q9HC62 589 aa15.31■□□□□ 0.04
HLA-DMB-258ENST00000418107 ROBO3Q96MS0 1386 aa15.31■□□□□ 0.04
HLA-DMB-258ENST00000418107 PFASO15067 1338 aa15.3■□□□□ 0.04
HLA-DMB-258ENST00000418107 CUL9Q8IWT3 2517 aa15.3■□□□□ 0.04
HLA-DMB-258ENST00000418107 VPS37CA5D8V6 355 aaPredicted RBP15.3■□□□□ 0.04
HLA-DMB-258ENST00000418107 JAK2O60674 1132 aa15.3■□□□□ 0.04
HLA-DMB-258ENST00000418107 PDIA4P13667 645 aaKnown RBP15.3■□□□□ 0.04
HLA-DMB-258ENST00000418107 SYT1P21579 422 aa15.3■□□□□ 0.04
HLA-DMB-258ENST00000418107 HOXA7P31268 230 aaPredicted RBP15.3■□□□□ 0.04
HLA-DMB-258ENST00000418107 APOA5Q6Q788 366 aa15.3■□□□□ 0.04
HLA-DMB-258ENST00000418107 C16orf86Q6ZW13 317 aa15.3■□□□□ 0.04
HLA-DMB-258ENST00000418107 Q7L0L9 218 aa15.3■□□□□ 0.04
HLA-DMB-258ENST00000418107 CATIPQ7Z7H3 387 aa15.3■□□□□ 0.04
HLA-DMB-258ENST00000418107 CCDC144CPQ8IYA2 1237 aa15.3■□□□□ 0.04
HLA-DMB-258ENST00000418107 GPRC5AQ8NFJ5 357 aa15.3■□□□□ 0.04
HLA-DMB-258ENST00000418107 NUP133Q8WUM0 1156 aa15.3■□□□□ 0.04
HLA-DMB-258ENST00000418107 SOCS4Q8WXH5 440 aa15.3■□□□□ 0.04
HLA-DMB-258ENST00000418107 TRIM34Q9BYJ4 488 aa15.3■□□□□ 0.04
HLA-DMB-258ENST00000418107 DHX36Q9H2U1 1008 aaKnown RBP15.3■□□□□ 0.04
HLA-DMB-258ENST00000418107 PTPDC1A2A3K4 754 aa15.29■□□□□ 0.04
HLA-DMB-258ENST00000418107 GOLGA6L22H0YM25 854 aa15.29■□□□□ 0.04
HLA-DMB-258ENST00000418107 H3BQV1 296 aa15.29■□□□□ 0.04
HLA-DMB-258ENST00000418107 CDKL5O76039 1030 aa15.29■□□□□ 0.04
HLA-DMB-258ENST00000418107 GDF11O95390 407 aa15.29■□□□□ 0.04
HLA-DMB-258ENST00000418107 BRD1O95696 1058 aa15.29■□□□□ 0.04
HLA-DMB-258ENST00000418107 XRCC5P13010 732 aaKnown RBP15.29■□□□□ 0.04
HLA-DMB-258ENST00000418107 RXRAP19793 462 aa15.29■□□□□ 0.04
HLA-DMB-258ENST00000418107 GPR153Q6NV75 609 aa15.29■□□□□ 0.04
HLA-DMB-258ENST00000418107 TDHQ8IZJ6 230 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms