RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 FANCCQ00597 558 aa5.68□□□□□ -1.5
HMGB3P20-201ENST00000417997 RAD51AP2Q09MP3 1159 aa5.68□□□□□ -1.5
HMGB3P20-201ENST00000417997 MESP2Q0VG99 397 aa5.68□□□□□ -1.5
HMGB3P20-201ENST00000417997 DUSP4Q13115 394 aa5.68□□□□□ -1.5
HMGB3P20-201ENST00000417997 SNW1Q13573 536 aaKnown RBP5.68□□□□□ -1.5
HMGB3P20-201ENST00000417997 LDLRAD1Q5T700 205 aa5.68□□□□□ -1.5
HMGB3P20-201ENST00000417997 SYDE1Q6ZW31 735 aaPredicted RBP5.68□□□□□ -1.5
HMGB3P20-201ENST00000417997 SLITRK4Q8IW52 837 aa5.68□□□□□ -1.5
HMGB3P20-201ENST00000417997 PDZD8Q8NEN9 1154 aa5.68□□□□□ -1.5
HMGB3P20-201ENST00000417997 RNF34Q969K3 372 aa5.68□□□□□ -1.5
HMGB3P20-201ENST00000417997 FERD3LQ96RJ6 166 aa5.68□□□□□ -1.5
HMGB3P20-201ENST00000417997 FOXP3Q9BZS1 431 aa5.68□□□□□ -1.5
HMGB3P20-201ENST00000417997 RNF32Q9H0A6 362 aa5.68□□□□□ -1.5
HMGB3P20-201ENST00000417997 EPB41L4BQ9H329 900 aa5.68□□□□□ -1.5
HMGB3P20-201ENST00000417997 KCNK12Q9HB15 430 aa5.68□□□□□ -1.5
HMGB3P20-201ENST00000417997 FBXL21Q9UKT6 434 aa5.68□□□□□ -1.5
HMGB3P20-201ENST00000417997 EHBP1L1Q8N3D4 1523 aa5.68□□□□□ -1.5
HMGB3P20-201ENST00000417997 FITM1A5D6W6 292 aa5.67□□□□□ -1.5
HMGB3P20-201ENST00000417997 MEIS1O00470 390 aa5.67□□□□□ -1.5
HMGB3P20-201ENST00000417997 NME1P15531 152 aaKnown RBP5.67□□□□□ -1.5
HMGB3P20-201ENST00000417997 PCBP3P57721 371 aaKnown RBP5.67□□□□□ -1.5
HMGB3P20-201ENST00000417997 TEKQ02763 1124 aa5.67□□□□□ -1.5
HMGB3P20-201ENST00000417997 NBPF9Q3BBW0 867 aa5.67□□□□□ -1.5
HMGB3P20-201ENST00000417997 WAPLQ7Z5K2 1190 aa5.67□□□□□ -1.5
HMGB3P20-201ENST00000417997 FBXO15Q8NCQ5 510 aaPredicted RBP5.67□□□□□ -1.5
HMGB3P20-201ENST00000417997 ENOX1Q8TC92 643 aaKnown RBP5.67□□□□□ -1.5
HMGB3P20-201ENST00000417997 SYTL5Q8TDW5 730 aaPredicted RBP5.67□□□□□ -1.5
HMGB3P20-201ENST00000417997 VWCEQ96DN2 955 aa5.67□□□□□ -1.5
HMGB3P20-201ENST00000417997 TCTN2Q96GX1 697 aa5.67□□□□□ -1.5
HMGB3P20-201ENST00000417997 SLC6A18Q96N87 628 aa5.67□□□□□ -1.5
HMGB3P20-201ENST00000417997 METTL5Q9NRN9 209 aaKnown RBP5.67□□□□□ -1.5
HMGB3P20-201ENST00000417997 GPR160Q9UJ42 338 aa5.67□□□□□ -1.5
HMGB3P20-201ENST00000417997 DISP1Q96F81 1524 aa5.67□□□□□ -1.5
HMGB3P20-201ENST00000417997 LRRC9Q6ZRR7 1453 aa5.66□□□□□ -1.5
HMGB3P20-201ENST00000417997 CLASP1Q7Z460 1538 aa5.66□□□□□ -1.5
HMGB3P20-201ENST00000417997 PRAMEF1O95521 474 aa5.66□□□□□ -1.5
HMGB3P20-201ENST00000417997 SYPP08247 313 aa5.66□□□□□ -1.5
HMGB3P20-201ENST00000417997 RAP1GAPP47736 663 aa5.66□□□□□ -1.5
HMGB3P20-201ENST00000417997 JAG1P78504 1218 aa5.66□□□□□ -1.5
HMGB3P20-201ENST00000417997 TIGD5Q53EQ6 642 aa5.66□□□□□ -1.5
HMGB3P20-201ENST00000417997 RNF111Q6ZNA4 994 aa5.66□□□□□ -1.5
HMGB3P20-201ENST00000417997 SPPL2CQ8IUH8 684 aa5.66□□□□□ -1.5
HMGB3P20-201ENST00000417997 TMEM192Q8IY95 271 aa5.66□□□□□ -1.5
HMGB3P20-201ENST00000417997 DAGLBQ8NCG7 672 aa5.66□□□□□ -1.5
HMGB3P20-201ENST00000417997 PPP1R16BQ96T49 567 aa5.66□□□□□ -1.5
HMGB3P20-201ENST00000417997 HDAC8Q9BY41 377 aa5.66□□□□□ -1.5
HMGB3P20-201ENST00000417997 PRDM14Q9GZV8 571 aa5.66□□□□□ -1.5
HMGB3P20-201ENST00000417997 TCFL5Q9UL49 500 aa5.66□□□□□ -1.5
HMGB3P20-201ENST00000417997 DBX1A6NMT0 343 aa5.65□□□□□ -1.5
HMGB3P20-201ENST00000417997 NFIBO00712 420 aa5.65□□□□□ -1.5
HMGB3P20-201ENST00000417997 PDE6BP35913 854 aa5.65□□□□□ -1.5
HMGB3P20-201ENST00000417997 CCNFP41002 786 aa5.65□□□□□ -1.5
HMGB3P20-201ENST00000417997 CHRNEQ04844 493 aa5.65□□□□□ -1.5
HMGB3P20-201ENST00000417997 SLC14A2Q15849 920 aa5.65□□□□□ -1.5
HMGB3P20-201ENST00000417997 LILRA2Q8N149 483 aa5.65□□□□□ -1.5
HMGB3P20-201ENST00000417997 USHBP1Q8N6Y0 703 aa5.65□□□□□ -1.5
HMGB3P20-201ENST00000417997 ZNF655Q8N720 491 aaPredicted RBP5.65□□□□□ -1.5
HMGB3P20-201ENST00000417997 SLC9A7Q96T83 725 aa5.65□□□□□ -1.5
HMGB3P20-201ENST00000417997 MINPP1Q9UNW1 487 aa5.65□□□□□ -1.5
HMGB3P20-201ENST00000417997 ITSN2Q9NZM3 1697 aa5.64□□□□□ -1.51
HMGB3P20-201ENST00000417997 MEIS3P2A8K0S8 358 aa5.64□□□□□ -1.51
HMGB3P20-201ENST00000417997 SCAMP3O14828 347 aaKnown RBP5.64□□□□□ -1.51
HMGB3P20-201ENST00000417997 SIGLEC6O43699 453 aa5.64□□□□□ -1.51
HMGB3P20-201ENST00000417997 USP2O75604 605 aaPredicted RBP5.64□□□□□ -1.51
HMGB3P20-201ENST00000417997 TMEM253P0C7T8 217 aa5.64□□□□□ -1.51
HMGB3P20-201ENST00000417997 IMPDH2P12268 514 aa5.64□□□□□ -1.51
HMGB3P20-201ENST00000417997 GALK1P51570 392 aa5.64□□□□□ -1.51
HMGB3P20-201ENST00000417997 SIRT2Q8IXJ6 389 aa5.64□□□□□ -1.51
HMGB3P20-201ENST00000417997 CCDC144CPQ8IYA2 1237 aa5.64□□□□□ -1.51
HMGB3P20-201ENST00000417997 ANKS4BQ8N8V4 417 aa5.64□□□□□ -1.51
HMGB3P20-201ENST00000417997 DHRS1Q96LJ7 313 aa5.64□□□□□ -1.51
HMGB3P20-201ENST00000417997 CHST7Q9NS84 486 aa5.64□□□□□ -1.51
HMGB3P20-201ENST00000417997 FAM86C1Q9NVL1 165 aa5.64□□□□□ -1.51
HMGB3P20-201ENST00000417997 GFOD1Q9NXC2 390 aa5.64□□□□□ -1.51
HMGB3P20-201ENST00000417997 EBF1Q9UH73 591 aa5.64□□□□□ -1.51
HMGB3P20-201ENST00000417997 DDX41Q9UJV9 622 aaKnown RBP5.64□□□□□ -1.51
HMGB3P20-201ENST00000417997 ZNRF3Q9ULT6 936 aa5.64□□□□□ -1.51
HMGB3P20-201ENST00000417997 PPT2Q9UMR5 302 aa5.64□□□□□ -1.51
HMGB3P20-201ENST00000417997 PCDHB12Q9Y5F1 795 aa5.64□□□□□ -1.51
HMGB3P20-201ENST00000417997 EPRSP07814 1512 aaKnown RBP5.64□□□□□ -1.51
HMGB3P20-201ENST00000417997 CDK13Q14004 1512 aaKnown RBP5.64□□□□□ -1.51
HMGB3P20-201ENST00000417997 TNFRSF10CO14798 259 aa5.63□□□□□ -1.51
HMGB3P20-201ENST00000417997 RECKO95980 971 aa5.63□□□□□ -1.51
HMGB3P20-201ENST00000417997 RACK1P63244 317 aaKnown RBP5.63□□□□□ -1.51
HMGB3P20-201ENST00000417997 TDRD10Q5VZ19 366 aaKnown RBP5.63□□□□□ -1.51
HMGB3P20-201ENST00000417997 ZPBP2Q6X784 338 aa5.63□□□□□ -1.51
HMGB3P20-201ENST00000417997 CEP128Q6ZU80 1094 aa5.63□□□□□ -1.51
HMGB3P20-201ENST00000417997 ZNF605Q86T29 641 aa5.63□□□□□ -1.51
HMGB3P20-201ENST00000417997 DSCC1Q9BVC3 393 aa5.63□□□□□ -1.51
HMGB3P20-201ENST00000417997 KRTAP9-9Q9BYP9 154 aa5.63□□□□□ -1.51
HMGB3P20-201ENST00000417997 KRTAP9-4Q9BYQ2 154 aa5.63□□□□□ -1.51
HMGB3P20-201ENST00000417997 SLC6A17Q9H1V8 727 aa5.63□□□□□ -1.51
HMGB3P20-201ENST00000417997 SP110Q9HB58 689 aa5.63□□□□□ -1.51
HMGB3P20-201ENST00000417997 MTUS2Q5JR59 1369 aa5.63□□□□□ -1.51
HMGB3P20-201ENST00000417997 ABCA8O94911 1581 aa5.63□□□□□ -1.51
HMGB3P20-201ENST00000417997 ADCY10Q96PN6 1610 aa5.63□□□□□ -1.51
HMGB3P20-201ENST00000417997 PSPNO60542 156 aa5.62□□□□□ -1.51
HMGB3P20-201ENST00000417997 TSPAN15O95858 294 aa5.62□□□□□ -1.51
HMGB3P20-201ENST00000417997 C1QTNF9P0C862 333 aa5.62□□□□□ -1.51
HMGB3P20-201ENST00000417997 ACRP10323 421 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms