RNA–Protein interactions for RNA: ENST00000417717.6

SATB1-204, Transcript of SATB homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene SATB1, Length 4,589 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-204ENST00000417717 CCDC84Q86UT8 332 aaPredicted RBP11.28□□□□□ -0.6
SATB1-204ENST00000417717 KRI1Q8N9T8 703 aaKnown RBP11.28□□□□□ -0.6
SATB1-204ENST00000417717 IL17RAQ96F46 866 aa11.28□□□□□ -0.6
SATB1-204ENST00000417717 PSMB7Q99436 277 aa11.28□□□□□ -0.6
SATB1-204ENST00000417717 DESI2Q9BSY9 194 aa11.28□□□□□ -0.6
SATB1-204ENST00000417717 NRDE2Q9H7Z3 1164 aa11.28□□□□□ -0.6
SATB1-204ENST00000417717 GOLGA8QA0A0J9YX86 632 aa11.28□□□□□ -0.6
SATB1-204ENST00000417717 GOLGA8OA6NCC3 632 aa11.28□□□□□ -0.6
SATB1-204ENST00000417717 NBPF26B4DH59 902 aa11.28□□□□□ -0.6
SATB1-204ENST00000417717 GOLGA8NF8WBI6 632 aa11.28□□□□□ -0.6
SATB1-204ENST00000417717 EEF1B2P24534 225 aaKnown RBP11.28□□□□□ -0.6
SATB1-204ENST00000417717 TMPOP42166 694 aaKnown RBP11.28□□□□□ -0.6
SATB1-204ENST00000417717 PDE1AP54750 535 aa11.28□□□□□ -0.6
SATB1-204ENST00000417717 RCN2Q14257 317 aa11.28□□□□□ -0.6
SATB1-204ENST00000417717 NBPF15Q8N660 670 aa11.28□□□□□ -0.6
SATB1-204ENST00000417717 MIEF2Q96C03 454 aa11.28□□□□□ -0.6
SATB1-204ENST00000417717 CCDC124Q96CT7 223 aaKnown RBP11.28□□□□□ -0.6
SATB1-204ENST00000417717 MPP4Q96JB8 637 aa11.28□□□□□ -0.6
SATB1-204ENST00000417717 ANKRD27Q96NW4 1050 aa11.28□□□□□ -0.6
SATB1-204ENST00000417717 NUDCD1Q96RS6 583 aa11.28□□□□□ -0.6
SATB1-204ENST00000417717 ANTXR1Q9H6X2 564 aa11.28□□□□□ -0.6
SATB1-204ENST00000417717 CCDC87Q9NVE4 849 aa11.28□□□□□ -0.6
SATB1-204ENST00000417717 CHMP2BQ9UQN3 213 aa11.28□□□□□ -0.6
SATB1-204ENST00000417717 COPG1Q9Y678 874 aaKnown RBP11.28□□□□□ -0.6
SATB1-204ENST00000417717 RNF123Q5XPI4 1314 aa11.28□□□□□ -0.6
SATB1-204ENST00000417717 RASGRF2O14827 1237 aa11.28□□□□□ -0.6
SATB1-204ENST00000417717 KLC3Q6P597 504 aa11.28□□□□□ -0.6
SATB1-204ENST00000417717 NLRP14Q86W24 1093 aa11.28□□□□□ -0.6
SATB1-204ENST00000417717 CCDC105Q8IYK2 499 aa11.28□□□□□ -0.6
SATB1-204ENST00000417717 ARHGAP45Q92619 1136 aa11.28□□□□□ -0.6
SATB1-204ENST00000417717 FERMT2Q96AC1 680 aa11.28□□□□□ -0.6
SATB1-204ENST00000417717 RNF41Q9H4P4 317 aaPredicted RBP11.28□□□□□ -0.6
SATB1-204ENST00000417717 TYW1Q9NV66 732 aaKnown RBP11.28□□□□□ -0.6
SATB1-204ENST00000417717 CEP126Q9P2H0 1117 aa11.28□□□□□ -0.6
SATB1-204ENST00000417717 GMEB1Q9Y692 573 aa11.28□□□□□ -0.6
SATB1-204ENST00000417717 SYNRGQ9UMZ2 1314 aa11.27□□□□□ -0.6
SATB1-204ENST00000417717 PAX7P23759 505 aa11.27□□□□□ -0.6
SATB1-204ENST00000417717 KRT2P35908 639 aa11.27□□□□□ -0.6
SATB1-204ENST00000417717 STRN3Q13033 797 aa11.27□□□□□ -0.6
SATB1-204ENST00000417717 STX3Q13277 289 aa11.27□□□□□ -0.6
SATB1-204ENST00000417717 GLE1Q53GS7 698 aaKnown RBP11.27□□□□□ -0.6
SATB1-204ENST00000417717 BTN2A1Q7KYR7 527 aa11.27□□□□□ -0.6
SATB1-204ENST00000417717 PEX26Q7Z412 305 aa11.27□□□□□ -0.6
SATB1-204ENST00000417717 ZFATQ9P243 1243 aa11.27□□□□□ -0.6
SATB1-204ENST00000417717 MCM8Q9UJA3 840 aa11.27□□□□□ -0.6
SATB1-204ENST00000417717 SSX2IPQ9Y2D8 614 aa11.27□□□□□ -0.6
SATB1-204ENST00000417717 MAGI2Q86UL8 1455 aa11.27□□□□□ -0.61
SATB1-204ENST00000417717 PABPN1LA6NDY0 278 aaKnown RBP11.27□□□□□ -0.61
SATB1-204ENST00000417717 NUTM2BA6NNL0 878 aaPredicted RBP11.27□□□□□ -0.61
SATB1-204ENST00000417717 NUTM2EB1AL46 878 aaPredicted RBP11.27□□□□□ -0.61
SATB1-204ENST00000417717 SPOPO43791 374 aa11.27□□□□□ -0.61
SATB1-204ENST00000417717 ARL1P40616 181 aaPredicted RBP11.27□□□□□ -0.61
SATB1-204ENST00000417717 ADKP55263 362 aaKnown RBP11.27□□□□□ -0.61
SATB1-204ENST00000417717 ASIC1P78348 528 aa11.27□□□□□ -0.61
SATB1-204ENST00000417717 ITIH3Q06033 890 aa11.27□□□□□ -0.61
SATB1-204ENST00000417717 FAM81AQ8TBF8 368 aa11.27□□□□□ -0.61
SATB1-204ENST00000417717 NSMCE1Q8WV22 266 aa11.27□□□□□ -0.61
SATB1-204ENST00000417717 ITFG2Q969R8 447 aa11.27□□□□□ -0.61
SATB1-204ENST00000417717 CARD9Q9H257 536 aa11.27□□□□□ -0.61
SATB1-204ENST00000417717 GGNBP2Q9H3C7 697 aa11.27□□□□□ -0.61
SATB1-204ENST00000417717 EHD2Q9NZN4 543 aa11.27□□□□□ -0.61
SATB1-204ENST00000417717 CAPN1P07384 714 aa11.27□□□□□ -0.61
SATB1-204ENST00000417717 ST5P78524 1137 aa11.27□□□□□ -0.61
SATB1-204ENST00000417717 PPWD1Q96BP3 646 aaKnown RBP11.27□□□□□ -0.61
SATB1-204ENST00000417717 NOC4LQ9BVI4 516 aaKnown RBP11.27□□□□□ -0.61
SATB1-204ENST00000417717 BOLA2Q9H3K6 86 aa11.27□□□□□ -0.61
SATB1-204ENST00000417717 ATP6V0A4Q9HBG4 840 aa11.27□□□□□ -0.61
SATB1-204ENST00000417717 NDE1Q9NXR1 346 aa11.27□□□□□ -0.61
SATB1-204ENST00000417717 SCHIP1Q9P0W5 487 aaPredicted RBP11.27□□□□□ -0.61
SATB1-204ENST00000417717 POLKQ9UBT6 870 aa11.27□□□□□ -0.61
SATB1-204ENST00000417717 IFIT3O14879 490 aaKnown RBP11.26□□□□□ -0.61
SATB1-204ENST00000417717 KRT14P02533 472 aa11.26□□□□□ -0.61
SATB1-204ENST00000417717 AP2B1P63010 937 aa11.26□□□□□ -0.61
SATB1-204ENST00000417717 KBTBD12Q3ZCT8 623 aa11.26□□□□□ -0.61
SATB1-204ENST00000417717 SWT1Q5T5J6 900 aaKnown RBP11.26□□□□□ -0.61
SATB1-204ENST00000417717 SLC35F6Q8N357 371 aa11.26□□□□□ -0.61
SATB1-204ENST00000417717 CUL5Q93034 780 aa11.26□□□□□ -0.61
SATB1-204ENST00000417717 SERPINI1Q99574 410 aa11.26□□□□□ -0.61
SATB1-204ENST00000417717 STMN3Q9NZ72 180 aa11.26□□□□□ -0.61
SATB1-204ENST00000417717 DLGAP2Q9P1A6 1054 aa11.26□□□□□ -0.61
SATB1-204ENST00000417717 WBP4O75554 376 aaKnown RBP11.26□□□□□ -0.61
SATB1-204ENST00000417717 THEMISQ8N1K5 641 aaPredicted RBP11.26□□□□□ -0.61
SATB1-204ENST00000417717 DDHD1Q8NEL9 900 aa11.26□□□□□ -0.61
SATB1-204ENST00000417717 ELAC2Q9BQ52 826 aaKnown RBP11.26□□□□□ -0.61
SATB1-204ENST00000417717 ERCC6L2Q5T890 1561 aa11.26□□□□□ -0.61
SATB1-204ENST00000417717 TMEM110-MUSTN1A8MSY1 372 aa11.26□□□□□ -0.61
SATB1-204ENST00000417717 AP1G2O75843 785 aa11.26□□□□□ -0.61
SATB1-204ENST00000417717 AP1B1Q10567 949 aa11.26□□□□□ -0.61
SATB1-204ENST00000417717 ST13P5Q8NFI4 369 aaPredicted RBP11.26□□□□□ -0.61
SATB1-204ENST00000417717 RIOK1Q9BRS2 568 aaKnown RBP11.26□□□□□ -0.61
SATB1-204ENST00000417717 NRBP1Q9UHY1 535 aa11.26□□□□□ -0.61
SATB1-204ENST00000417717 RBM8AQ9Y5S9 174 aaKnown RBP11.26□□□□□ -0.61
SATB1-204ENST00000417717 SERPINB1P30740 379 aa11.26□□□□□ -0.61
SATB1-204ENST00000417717 SERPINB10P48595 397 aa11.26□□□□□ -0.61
SATB1-204ENST00000417717 LONP2Q86WA8 852 aa11.26□□□□□ -0.61
SATB1-204ENST00000417717 NCOA7Q8NI08 942 aa11.26□□□□□ -0.61
SATB1-204ENST00000417717 SEC63Q9UGP8 760 aaKnown RBP11.26□□□□□ -0.61
SATB1-204ENST00000417717 SYCE1LA8MT33 242 aa11.25□□□□□ -0.61
SATB1-204ENST00000417717 ZBBXA8MT70 800 aa11.25□□□□□ -0.61
SATB1-204ENST00000417717 KRIT1O00522 736 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms