RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 C6orf118Q5T5N4 469 aa7.01□□□□□ -1.29
ECHDC1-206ENST00000417628 PRICKLE2Q7Z3G6 844 aa7.01□□□□□ -1.29
ECHDC1-206ENST00000417628 TIFAQ96CG3 184 aa7.01□□□□□ -1.29
ECHDC1-206ENST00000417628 SUSD3Q96L08 255 aa7.01□□□□□ -1.29
ECHDC1-206ENST00000417628 RNPC3Q96LT9 517 aaKnown RBP7.01□□□□□ -1.29
ECHDC1-206ENST00000417628 PRDM12Q9H4Q4 367 aa7.01□□□□□ -1.29
ECHDC1-206ENST00000417628 RNF19AQ9NV58 838 aa7.01□□□□□ -1.29
ECHDC1-206ENST00000417628 OGDHLQ9ULD0 1010 aa7.01□□□□□ -1.29
ECHDC1-206ENST00000417628 PSME4Q14997 1843 aa7.01□□□□□ -1.29
ECHDC1-206ENST00000417628 LRRC37A2A6NM11 1700 aa7.01□□□□□ -1.29
ECHDC1-206ENST00000417628 MAP3K15Q6ZN16 1313 aa7.01□□□□□ -1.29
ECHDC1-206ENST00000417628 CDH23Q9H251 3354 aa7□□□□□ -1.29
ECHDC1-206ENST00000417628 TGFBR3LH3BV60 316 aa7□□□□□ -1.29
ECHDC1-206ENST00000417628 USP2O75604 605 aaPredicted RBP7□□□□□ -1.29
ECHDC1-206ENST00000417628 UPP2O95045 317 aa7□□□□□ -1.29
ECHDC1-206ENST00000417628 RECKO95980 971 aa7□□□□□ -1.29
ECHDC1-206ENST00000417628 MAPK8P45983 427 aa7□□□□□ -1.29
ECHDC1-206ENST00000417628 WDR44Q5JSH3 913 aa7□□□□□ -1.29
ECHDC1-206ENST00000417628 SLC10A5Q5PT55 438 aa7□□□□□ -1.29
ECHDC1-206ENST00000417628 MRPL14Q6P1L8 145 aaKnown RBP7□□□□□ -1.29
ECHDC1-206ENST00000417628 TBC1D16Q8TBP0 767 aa7□□□□□ -1.29
ECHDC1-206ENST00000417628 HSH2DQ96JZ2 352 aa7□□□□□ -1.29
ECHDC1-206ENST00000417628 CARD11Q9BXL7 1154 aa7□□□□□ -1.29
ECHDC1-206ENST00000417628 NCOR1O75376 2440 aa7□□□□□ -1.29
ECHDC1-206ENST00000417628 TCF20Q9UGU0 1960 aaKnown RBP7□□□□□ -1.29
ECHDC1-206ENST00000417628 CACNA1BQ00975 2339 aa7□□□□□ -1.29
ECHDC1-206ENST00000417628 ANKRD36CQ5JPF3 1778 aa7□□□□□ -1.29
ECHDC1-206ENST00000417628 ZNF804BA4D1E1 1349 aa7□□□□□ -1.29
ECHDC1-206ENST00000417628 MYO3BQ8WXR4 1341 aa7□□□□□ -1.29
ECHDC1-206ENST00000417628 COL4A1P02462 1669 aa7□□□□□ -1.29
ECHDC1-206ENST00000417628 ERC2O15083 957 aa6.99□□□□□ -1.29
ECHDC1-206ENST00000417628 AVPP01185 164 aa6.99□□□□□ -1.29
ECHDC1-206ENST00000417628 LDHBP07195 334 aaKnown RBP6.99□□□□□ -1.29
ECHDC1-206ENST00000417628 RHOQP17081 205 aa6.99□□□□□ -1.29
ECHDC1-206ENST00000417628 USP5P45974 858 aa6.99□□□□□ -1.29
ECHDC1-206ENST00000417628 MMP14P50281 582 aa6.99□□□□□ -1.29
ECHDC1-206ENST00000417628 SNAPC2Q13487 334 aa6.99□□□□□ -1.29
ECHDC1-206ENST00000417628 MRPL58Q14197 206 aaKnown RBP6.99□□□□□ -1.29
ECHDC1-206ENST00000417628 ADGRE1Q14246 886 aa6.99□□□□□ -1.29
ECHDC1-206ENST00000417628 ENOX2Q16206 610 aaKnown RBP6.99□□□□□ -1.29
ECHDC1-206ENST00000417628 PARP10Q53GL7 1025 aa6.99□□□□□ -1.29
ECHDC1-206ENST00000417628 KIF6Q6ZMV9 814 aa6.99□□□□□ -1.29
ECHDC1-206ENST00000417628 LYSMD3Q7Z3D4 306 aa6.99□□□□□ -1.29
ECHDC1-206ENST00000417628 GPC6Q9Y625 555 aaPredicted RBP6.99□□□□□ -1.29
ECHDC1-206ENST00000417628 A6NHS1 94 aa6.98□□□□□ -1.29
ECHDC1-206ENST00000417628 PRPF40AO75400 957 aaKnown RBP6.98□□□□□ -1.29
ECHDC1-206ENST00000417628 UFL1O94874 794 aa6.98□□□□□ -1.29
ECHDC1-206ENST00000417628 HMGCRP04035 888 aa6.98□□□□□ -1.29
ECHDC1-206ENST00000417628 MSX1P28360 303 aa6.98□□□□□ -1.29
ECHDC1-206ENST00000417628 ID4P47928 161 aa6.98□□□□□ -1.29
ECHDC1-206ENST00000417628 VGLL4Q14135 290 aa6.98□□□□□ -1.29
ECHDC1-206ENST00000417628 NBPF12Q5TAG4 269 aaPredicted RBP6.98□□□□□ -1.29
ECHDC1-206ENST00000417628 IER5Q5VY09 327 aa6.98□□□□□ -1.29
ECHDC1-206ENST00000417628 TRIM46Q7Z4K8 759 aa6.98□□□□□ -1.29
ECHDC1-206ENST00000417628 ZNF34Q8IZ26 560 aa6.98□□□□□ -1.29
ECHDC1-206ENST00000417628 NAP1L5Q96NT1 182 aaPredicted RBP6.98□□□□□ -1.29
ECHDC1-206ENST00000417628 CNTNAP3BQ96NU0 1288 aa6.98□□□□□ -1.29
ECHDC1-206ENST00000417628 DUSP9Q99956 384 aaKnown RBP6.98□□□□□ -1.29
ECHDC1-206ENST00000417628 UTP14AQ9BVJ6 771 aaKnown RBP6.98□□□□□ -1.29
ECHDC1-206ENST00000417628 CNTNAP3Q9BZ76 1288 aa6.98□□□□□ -1.29
ECHDC1-206ENST00000417628 PARP2Q9UGN5 583 aa6.98□□□□□ -1.29
ECHDC1-206ENST00000417628 CSADQ9Y600 493 aa6.98□□□□□ -1.29
ECHDC1-206ENST00000417628 SIPA1L3O60292 1781 aaPredicted RBP6.97□□□□□ -1.29
ECHDC1-206ENST00000417628 ZDBF2Q9HCK1 2354 aa6.97□□□□□ -1.29
ECHDC1-206ENST00000417628 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.97□□□□□ -1.29
ECHDC1-206ENST00000417628 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.97□□□□□ -1.29
ECHDC1-206ENST00000417628 FAM187AA6NFU0 413 aa6.97□□□□□ -1.29
ECHDC1-206ENST00000417628 TTLL8A6PVC2 850 aa6.97□□□□□ -1.29
ECHDC1-206ENST00000417628 PDHXO00330 501 aa6.97□□□□□ -1.29
ECHDC1-206ENST00000417628 TNPO2O14787 897 aaKnown RBP6.97□□□□□ -1.29
ECHDC1-206ENST00000417628 SNRPA1P09661 255 aaKnown RBP6.97□□□□□ -1.29
ECHDC1-206ENST00000417628 ALADP13716 330 aa6.97□□□□□ -1.29
ECHDC1-206ENST00000417628 TCF3P15923 654 aa6.97□□□□□ -1.29
ECHDC1-206ENST00000417628 INPP5BP32019 993 aa6.97□□□□□ -1.29
ECHDC1-206ENST00000417628 IDH3AP50213 366 aa6.97□□□□□ -1.29
ECHDC1-206ENST00000417628 CALD1Q05682 793 aaKnown RBP6.97□□□□□ -1.29
ECHDC1-206ENST00000417628 HIF1AQ16665 826 aa6.97□□□□□ -1.29
ECHDC1-206ENST00000417628 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.97□□□□□ -1.29
ECHDC1-206ENST00000417628 ANKRD23Q86SG2 305 aa6.97□□□□□ -1.29
ECHDC1-206ENST00000417628 MICALL1Q8N3F8 863 aa6.97□□□□□ -1.29
ECHDC1-206ENST00000417628 BADQ92934 168 aa6.97□□□□□ -1.29
ECHDC1-206ENST00000417628 ZBED3Q96IU2 234 aaPredicted RBP6.97□□□□□ -1.29
ECHDC1-206ENST00000417628 TESK2Q96S53 571 aa6.97□□□□□ -1.29
ECHDC1-206ENST00000417628 PARK7Q99497 189 aaKnown RBP6.97□□□□□ -1.29
ECHDC1-206ENST00000417628 TIMMDC1Q9NPL8 285 aa6.97□□□□□ -1.29
ECHDC1-206ENST00000417628 KCNH4Q9UQ05 1017 aa6.97□□□□□ -1.29
ECHDC1-206ENST00000417628 USP20Q9Y2K6 914 aa6.97□□□□□ -1.29
ECHDC1-206ENST00000417628 NUP98P52948 1817 aa6.97□□□□□ -1.29
ECHDC1-206ENST00000417628 PNMA6FA0A0J9YX94 578 aa6.96□□□□□ -1.3
ECHDC1-206ENST00000417628 MED19A0JLT2 244 aaPredicted RBP6.96□□□□□ -1.3
ECHDC1-206ENST00000417628 FIGNL2A6NMB9 653 aa6.96□□□□□ -1.3
ECHDC1-206ENST00000417628 KCNQ3O43525 872 aa6.96□□□□□ -1.3
ECHDC1-206ENST00000417628 HMGB1P09429 215 aaKnown RBP6.96□□□□□ -1.3
ECHDC1-206ENST00000417628 BCRP11274 1271 aa6.96□□□□□ -1.3
ECHDC1-206ENST00000417628 HCLS1P14317 486 aaPredicted RBP6.96□□□□□ -1.3
ECHDC1-206ENST00000417628 PCSK2P16519 638 aa6.96□□□□□ -1.3
ECHDC1-206ENST00000417628 GRNP28799 593 aaKnown RBP6.96□□□□□ -1.3
ECHDC1-206ENST00000417628 ORC1Q13415 861 aa6.96□□□□□ -1.3
ECHDC1-206ENST00000417628 MTHFSDQ2M296 383 aaKnown RBP6.96□□□□□ -1.3
ECHDC1-206ENST00000417628 C8orf34Q49A92 452 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms