RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 PDHXO00330 501 aa9.83□□□□□ -0.84
TRIM48-201ENST00000417545 PDIA3P30101 505 aaKnown RBP9.83□□□□□ -0.84
TRIM48-201ENST00000417545 SLC4A3P48751 1232 aa9.83□□□□□ -0.84
TRIM48-201ENST00000417545 ZNF543Q08ER8 600 aa9.83□□□□□ -0.84
TRIM48-201ENST00000417545 MKRN4PQ13434 485 aaPredicted RBP9.83□□□□□ -0.84
TRIM48-201ENST00000417545 TAF1CQ15572 869 aaPredicted RBP9.83□□□□□ -0.84
TRIM48-201ENST00000417545 TREML2Q5T2D2 321 aa9.83□□□□□ -0.84
TRIM48-201ENST00000417545 ANKRD23Q86SG2 305 aa9.83□□□□□ -0.84
TRIM48-201ENST00000417545 CCDC83Q8IWF9 413 aa9.83□□□□□ -0.84
TRIM48-201ENST00000417545 TRIM22Q8IYM9 498 aa9.83□□□□□ -0.84
TRIM48-201ENST00000417545 FBXL16Q8N461 479 aa9.83□□□□□ -0.84
TRIM48-201ENST00000417545 BRI3BPQ8WY22 251 aa9.83□□□□□ -0.84
TRIM48-201ENST00000417545 PARK7Q99497 189 aaKnown RBP9.83□□□□□ -0.84
TRIM48-201ENST00000417545 MAP3K14Q99558 947 aa9.83□□□□□ -0.84
TRIM48-201ENST00000417545 AGXT2Q9BYV1 514 aa9.83□□□□□ -0.84
TRIM48-201ENST00000417545 VAT1LQ9HCJ6 419 aa9.83□□□□□ -0.84
TRIM48-201ENST00000417545 TPCN1Q9ULQ1 816 aa9.83□□□□□ -0.84
TRIM48-201ENST00000417545 BTBD19C9JJ37 291 aa9.82□□□□□ -0.84
TRIM48-201ENST00000417545 ZBED4O75132 1171 aa9.82□□□□□ -0.84
TRIM48-201ENST00000417545 ALDH1A1P00352 501 aa9.82□□□□□ -0.84
TRIM48-201ENST00000417545 SLC16A2P36021 539 aa9.82□□□□□ -0.84
TRIM48-201ENST00000417545 VEGFBP49765 207 aa9.82□□□□□ -0.84
TRIM48-201ENST00000417545 TROAPQ12815 778 aa9.82□□□□□ -0.84
TRIM48-201ENST00000417545 PLS1Q14651 629 aa9.82□□□□□ -0.84
TRIM48-201ENST00000417545 COG2Q14746 738 aa9.82□□□□□ -0.84
TRIM48-201ENST00000417545 SYDE2Q5VT97 1194 aa9.82□□□□□ -0.84
TRIM48-201ENST00000417545 RASGRP2Q7LDG7 609 aa9.82□□□□□ -0.84
TRIM48-201ENST00000417545 HOMER1Q86YM7 354 aa9.82□□□□□ -0.84
TRIM48-201ENST00000417545 CCAR1Q8IX12 1150 aaKnown RBP9.82□□□□□ -0.84
TRIM48-201ENST00000417545 CCDC82Q8N4S0 544 aa9.82□□□□□ -0.84
TRIM48-201ENST00000417545 PRPF38AQ8NAV1 312 aaKnown RBP9.82□□□□□ -0.84
TRIM48-201ENST00000417545 GTF3C2Q8WUA4 911 aaPredicted RBP9.82□□□□□ -0.84
TRIM48-201ENST00000417545 PIBF1Q8WXW3 757 aa9.82□□□□□ -0.84
TRIM48-201ENST00000417545 RRP36Q96EU6 259 aaKnown RBP9.82□□□□□ -0.84
TRIM48-201ENST00000417545 PAGR1Q9BTK6 254 aa9.82□□□□□ -0.84
TRIM48-201ENST00000417545 UBA5Q9GZZ9 404 aa9.82□□□□□ -0.84
TRIM48-201ENST00000417545 HOXC10Q9NYD6 342 aa9.82□□□□□ -0.84
TRIM48-201ENST00000417545 KIF3AQ9Y496 699 aa9.82□□□□□ -0.84
TRIM48-201ENST00000417545 K7ELQ4 463 aaPredicted RBP9.82□□□□□ -0.84
TRIM48-201ENST00000417545 PFKFB2O60825 505 aa9.82□□□□□ -0.84
TRIM48-201ENST00000417545 PLEKHA8P1O95397 391 aa9.82□□□□□ -0.84
TRIM48-201ENST00000417545 SNHG28P0DPA3 235 aa9.82□□□□□ -0.84
TRIM48-201ENST00000417545 FDX1P10109 184 aa9.82□□□□□ -0.84
TRIM48-201ENST00000417545 MAP2K2P36507 400 aa9.82□□□□□ -0.84
TRIM48-201ENST00000417545 SSRP1Q08945 709 aaKnown RBP9.82□□□□□ -0.84
TRIM48-201ENST00000417545 TRAF1Q13077 416 aa9.82□□□□□ -0.84
TRIM48-201ENST00000417545 ME3Q16798 604 aa9.82□□□□□ -0.84
TRIM48-201ENST00000417545 KIAA1755Q5JYT7 1200 aa9.82□□□□□ -0.84
TRIM48-201ENST00000417545 TTBK2Q6IQ55 1244 aa9.82□□□□□ -0.84
TRIM48-201ENST00000417545 CCDC174Q6PII3 467 aa9.82□□□□□ -0.84
TRIM48-201ENST00000417545 CATSPERGQ6ZRH7 1159 aa9.82□□□□□ -0.84
TRIM48-201ENST00000417545 IFNL1Q8IU54 200 aa9.82□□□□□ -0.84
TRIM48-201ENST00000417545 STAG2Q8N3U4 1231 aa9.82□□□□□ -0.84
TRIM48-201ENST00000417545 NECAB1Q8N987 351 aa9.82□□□□□ -0.84
TRIM48-201ENST00000417545 GTF3C6Q969F1 213 aa9.82□□□□□ -0.84
TRIM48-201ENST00000417545 MS4A4AQ96JQ5 239 aa9.82□□□□□ -0.84
TRIM48-201ENST00000417545 SLC26A6Q9BXS9 759 aa9.82□□□□□ -0.84
TRIM48-201ENST00000417545 ASCC2Q9H1I8 757 aaPredicted RBP9.82□□□□□ -0.84
TRIM48-201ENST00000417545 ZFYVE28Q9HCC9 887 aa9.82□□□□□ -0.84
TRIM48-201ENST00000417545 NCOA5Q9HCD5 579 aaKnown RBP9.82□□□□□ -0.84
TRIM48-201ENST00000417545 ZCCHC17Q9NP64 241 aaKnown RBP9.82□□□□□ -0.84
TRIM48-201ENST00000417545 RBM27Q9P2N5 1060 aaKnown RBP9.82□□□□□ -0.84
TRIM48-201ENST00000417545 MAD2L2Q9UI95 211 aa9.82□□□□□ -0.84
TRIM48-201ENST00000417545 PPP1R9AQ9ULJ8 1098 aa9.82□□□□□ -0.84
TRIM48-201ENST00000417545 SLC45A1Q9Y2W3 748 aa9.82□□□□□ -0.84
TRIM48-201ENST00000417545 COL11A1P12107 1806 aaPredicted RBP9.81□□□□□ -0.84
TRIM48-201ENST00000417545 PARP14Q460N5 1801 aa9.81□□□□□ -0.84
TRIM48-201ENST00000417545 NID2Q14112 1375 aa9.81□□□□□ -0.84
TRIM48-201ENST00000417545 MYPNQ86TC9 1320 aa9.81□□□□□ -0.84
TRIM48-201ENST00000417545 PALM3A6NDB9 673 aaPredicted RBP9.81□□□□□ -0.84
TRIM48-201ENST00000417545 LARGE1O95461 756 aa9.81□□□□□ -0.84
TRIM48-201ENST00000417545 HOXA7P31268 230 aaPredicted RBP9.81□□□□□ -0.84
TRIM48-201ENST00000417545 EVCP57679 992 aa9.81□□□□□ -0.84
TRIM48-201ENST00000417545 HERVK_113P62684 666 aa9.81□□□□□ -0.84
TRIM48-201ENST00000417545 SCRN1Q12765 414 aa9.81□□□□□ -0.84
TRIM48-201ENST00000417545 WDR78Q5VTH9 848 aa9.81□□□□□ -0.84
TRIM48-201ENST00000417545 TMTC3Q6ZXV5 915 aa9.81□□□□□ -0.84
TRIM48-201ENST00000417545 ADGRF4Q8IZF3 695 aa9.81□□□□□ -0.84
TRIM48-201ENST00000417545 FAM43AQ8N2R8 423 aa9.81□□□□□ -0.84
TRIM48-201ENST00000417545 FAM184AQ8NB25 1140 aa9.81□□□□□ -0.84
TRIM48-201ENST00000417545 WASF1Q92558 559 aa9.81□□□□□ -0.84
TRIM48-201ENST00000417545 SNX21Q969T3 373 aa9.81□□□□□ -0.84
TRIM48-201ENST00000417545 SPZ1Q9BXG8 430 aa9.81□□□□□ -0.84
TRIM48-201ENST00000417545 CPVLQ9H3G5 476 aa9.81□□□□□ -0.84
TRIM48-201ENST00000417545 FBXO28Q9NVF7 368 aa9.81□□□□□ -0.84
TRIM48-201ENST00000417545 PRR12Q9ULL5 1215 aa9.81□□□□□ -0.84
TRIM48-201ENST00000417545 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.81□□□□□ -0.84
TRIM48-201ENST00000417545 TESPA1A2RU30 521 aaPredicted RBP9.8□□□□□ -0.84
TRIM48-201ENST00000417545 IGF2BP3O00425 579 aaKnown RBP eCLIP9.8□□□□□ -0.84
TRIM48-201ENST00000417545 PLA2G6O60733 806 aa9.8□□□□□ -0.84
TRIM48-201ENST00000417545 CYP2C8P10632 490 aa9.8□□□□□ -0.84
TRIM48-201ENST00000417545 XBP1P17861 261 aa9.8□□□□□ -0.84
TRIM48-201ENST00000417545 CDC27P30260 824 aa9.8□□□□□ -0.84
TRIM48-201ENST00000417545 ADD1P35611 737 aaKnown RBP9.8□□□□□ -0.84
TRIM48-201ENST00000417545 GCLCP48506 637 aaPredicted RBP9.8□□□□□ -0.84
TRIM48-201ENST00000417545 MAP2K1Q02750 393 aaPredicted RBP9.8□□□□□ -0.84
TRIM48-201ENST00000417545 CDC37Q16543 378 aaPredicted RBP9.8□□□□□ -0.84
TRIM48-201ENST00000417545 GPAT2Q6NUI2 795 aa9.8□□□□□ -0.84
TRIM48-201ENST00000417545 CPXCR1Q8N123 301 aa9.8□□□□□ -0.84
TRIM48-201ENST00000417545 CMTR1Q8N1G2 835 aaKnown RBP9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms