RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 FCER1AP12319 257 aa21.58■■□□□ 1.05
VCP-202ENST00000417448 ACLYP53396 1101 aa21.58■■□□□ 1.05
VCP-202ENST00000417448 MAGEB6Q8N7X4 407 aa21.58■■□□□ 1.05
VCP-202ENST00000417448 STARD7Q9NQZ5 370 aa21.58■■□□□ 1.05
VCP-202ENST00000417448 SYNRGQ9UMZ2 1314 aa21.57■■□□□ 1.04
VCP-202ENST00000417448 FLOT1O75955 427 aa21.57■■□□□ 1.04
VCP-202ENST00000417448 TMEM132BQ14DG7 1078 aa21.57■■□□□ 1.04
VCP-202ENST00000417448 CLEC10AQ8IUN9 316 aa21.57■■□□□ 1.04
VCP-202ENST00000417448 HAUS7Q99871 368 aa21.57■■□□□ 1.04
VCP-202ENST00000417448 PAG1Q9NWQ8 432 aa21.57■■□□□ 1.04
VCP-202ENST00000417448 MYADML2A6NDP7 307 aa21.56■■□□□ 1.04
VCP-202ENST00000417448 MPHOSPH10O00566 681 aaKnown RBP21.56■■□□□ 1.04
VCP-202ENST00000417448 AKR1A1P14550 325 aa21.56■■□□□ 1.04
VCP-202ENST00000417448 CSF2RAP15509 400 aa21.56■■□□□ 1.04
VCP-202ENST00000417448 NUCB1Q02818 461 aa21.56■■□□□ 1.04
VCP-202ENST00000417448 ZNF792Q3KQV3 632 aa21.56■■□□□ 1.04
VCP-202ENST00000417448 CCSAPQ6IQ19 270 aaPredicted RBP21.56■■□□□ 1.04
VCP-202ENST00000417448 SPICE1Q8N0Z3 855 aa21.56■■□□□ 1.04
VCP-202ENST00000417448 KLHDC9Q8NEP7 349 aa21.56■■□□□ 1.04
VCP-202ENST00000417448 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.56■■□□□ 1.04
VCP-202ENST00000417448 TSEN34Q9BSV6 310 aaKnown RBP21.56■■□□□ 1.04
VCP-202ENST00000417448 ACRP10323 421 aa21.55■■□□□ 1.04
VCP-202ENST00000417448 IGFBP4P22692 258 aa21.55■■□□□ 1.04
VCP-202ENST00000417448 IRX5P78411 483 aaPredicted RBP21.55■■□□□ 1.04
VCP-202ENST00000417448 PPIGQ13427 754 aaKnown RBP eCLIP21.55■■□□□ 1.044e-9■□□□□ 10.8
VCP-202ENST00000417448 CHD1LQ86WJ1 897 aa21.55■■□□□ 1.04
VCP-202ENST00000417448 CERS3Q8IU89 383 aa21.55■■□□□ 1.04
VCP-202ENST00000417448 SIAH1Q8IUQ4 282 aa21.55■■□□□ 1.04
VCP-202ENST00000417448 MMP19Q99542 508 aa21.55■■□□□ 1.04
VCP-202ENST00000417448 RIOK1Q9BRS2 568 aaKnown RBP21.55■■□□□ 1.04
VCP-202ENST00000417448 SALL3Q9BXA9 1300 aa21.55■■□□□ 1.04
VCP-202ENST00000417448 MX1P20591 662 aa21.54■■□□□ 1.04
VCP-202ENST00000417448 KCNA10Q16322 511 aa21.54■■□□□ 1.04
VCP-202ENST00000417448 SAMD1Q6SPF0 538 aaPredicted RBP21.54■■□□□ 1.04
VCP-202ENST00000417448 ZNF365Q70YC5 407 aa21.54■■□□□ 1.04
VCP-202ENST00000417448 PI4K2BQ8TCG2 481 aa21.54■■□□□ 1.04
VCP-202ENST00000417448 NUP133Q8WUM0 1156 aa21.54■■□□□ 1.04
VCP-202ENST00000417448 GPATCH3Q96I76 525 aa21.54■■□□□ 1.04
VCP-202ENST00000417448 MCM3APO60318 1980 aa21.54■■□□□ 1.04
VCP-202ENST00000417448 POLR3DP05423 398 aaPredicted RBP21.53■■□□□ 1.04
VCP-202ENST00000417448 BMP1P13497 986 aa21.53■■□□□ 1.04
VCP-202ENST00000417448 IL27Q8NEV9 243 aa21.53■■□□□ 1.04
VCP-202ENST00000417448 NKX2-4Q9H2Z4 354 aa21.53■■□□□ 1.04
VCP-202ENST00000417448 CXXC1Q9P0U4 656 aaPredicted RBP21.53■■□□□ 1.04
VCP-202ENST00000417448 DIS3Q9Y2L1 958 aaKnown RBP21.53■■□□□ 1.04
VCP-202ENST00000417448 YBX2Q9Y2T7 364 aaKnown RBP21.53■■□□□ 1.04
VCP-202ENST00000417448 MOXD2PA6NHM9 499 aa21.52■■□□□ 1.04
VCP-202ENST00000417448 SLC25A27O95847 323 aa21.52■■□□□ 1.04
VCP-202ENST00000417448 NEFLP07196 543 aa21.52■■□□□ 1.04
VCP-202ENST00000417448 CDK7P50613 346 aa21.52■■□□□ 1.04
VCP-202ENST00000417448 TFF2Q03403 129 aa21.52■■□□□ 1.04
VCP-202ENST00000417448 C1QTNF1Q9BXJ1 281 aa21.52■■□□□ 1.04
VCP-202ENST00000417448 PPP1R12CQ9BZL4 782 aa21.52■■□□□ 1.04
VCP-202ENST00000417448 FBXO28Q9NVF7 368 aa21.52■■□□□ 1.04
VCP-202ENST00000417448 ADAMTS5Q9UNA0 930 aa21.52■■□□□ 1.04
VCP-202ENST00000417448 PDE6AP16499 860 aa21.51■■□□□ 1.03
VCP-202ENST00000417448 PDE4AP27815 886 aa21.51■■□□□ 1.03
VCP-202ENST00000417448 PDE1AP54750 535 aa21.51■■□□□ 1.03
VCP-202ENST00000417448 TTF1Q15361 905 aaPredicted RBP21.51■■□□□ 1.03
VCP-202ENST00000417448 SLC9C2Q5TAH2 1124 aa21.51■■□□□ 1.03
VCP-202ENST00000417448 PSRC1Q6PGN9 363 aaPredicted RBP21.51■■□□□ 1.03
VCP-202ENST00000417448 RIOX2Q8IUF8 465 aa21.51■■□□□ 1.03
VCP-202ENST00000417448 VCPKMTQ9H867 229 aa21.51■■□□□ 1.03
VCP-202ENST00000417448 TMX2Q9Y320 296 aa21.51■■□□□ 1.03
VCP-202ENST00000417448 TTC41PQ6P2S7 1318 aa21.51■■□□□ 1.03
VCP-202ENST00000417448 ADCY6O43306 1168 aa21.5■■□□□ 1.03
VCP-202ENST00000417448 CYP2D6P10635 497 aa21.5■■□□□ 1.03
VCP-202ENST00000417448 KCTD2Q14681 263 aa21.5■■□□□ 1.03
VCP-202ENST00000417448 RAB30Q15771 203 aa21.5■■□□□ 1.03
VCP-202ENST00000417448 CCDC174Q6PII3 467 aa21.5■■□□□ 1.03
VCP-202ENST00000417448 TMEM179Q6ZVK1 233 aa21.5■■□□□ 1.03
VCP-202ENST00000417448 SKAP1Q86WV1 359 aa21.5■■□□□ 1.03
VCP-202ENST00000417448 MSRAQ9UJ68 235 aa21.5■■□□□ 1.03
VCP-202ENST00000417448 CNPY2Q9Y2B0 182 aa21.5■■□□□ 1.03
VCP-202ENST00000417448 BAZ2AQ9UIF9 1905 aaKnown RBP21.5■■□□□ 1.03
VCP-202ENST00000417448 MROH7Q68CQ1 1323 aa21.5■■□□□ 1.03
VCP-202ENST00000417448 SYNGAP1Q96PV0 1343 aa21.5■■□□□ 1.03
VCP-202ENST00000417448 ZNF532Q9HCE3 1301 aa21.5■■□□□ 1.03
VCP-202ENST00000417448 PRRC2BQ5JSZ5 2229 aaKnown RBP21.49■■□□□ 1.03
VCP-202ENST00000417448 SNAI1O95863 264 aaPredicted RBP21.49■■□□□ 1.03
VCP-202ENST00000417448 AKR1B1P15121 316 aa21.49■■□□□ 1.03
VCP-202ENST00000417448 KCNQ1P51787 676 aa21.49■■□□□ 1.03
VCP-202ENST00000417448 PLEKHM2Q8IWE5 1019 aa21.49■■□□□ 1.03
VCP-202ENST00000417448 FAM126BQ8IXS8 530 aa21.49■■□□□ 1.03
VCP-202ENST00000417448 TMEM199Q8N511 208 aa21.49■■□□□ 1.03
VCP-202ENST00000417448 HERVK_113Q902F9 699 aa21.49■■□□□ 1.03
VCP-202ENST00000417448 GLT1D1Q96MS3 346 aa21.49■■□□□ 1.03
VCP-202ENST00000417448 MCM9Q9NXL9 1143 aa21.49■■□□□ 1.03
VCP-202ENST00000417448 ZNF214Q9UL59 606 aaPredicted RBP21.49■■□□□ 1.03
VCP-202ENST00000417448 ELP1O95163 1332 aa21.49■■□□□ 1.03
VCP-202ENST00000417448 TCRBV5S4A2TA0A5A2 114 aa21.48■■□□□ 1.03
VCP-202ENST00000417448 WDR46O15213 610 aaKnown RBP21.48■■□□□ 1.03
VCP-202ENST00000417448 CST5P28325 142 aaPredicted RBP21.48■■□□□ 1.03
VCP-202ENST00000417448 ICA1Q05084 483 aa21.48■■□□□ 1.03
VCP-202ENST00000417448 REPS2Q8NFH8 660 aa21.48■■□□□ 1.03
VCP-202ENST00000417448 DYNLL2Q96FJ2 89 aa21.48■■□□□ 1.03
VCP-202ENST00000417448 LRFN3Q9BTN0 628 aa21.48■■□□□ 1.03
VCP-202ENST00000417448 PIEZO1Q92508 2521 aa21.47■■□□□ 1.03
VCP-202ENST00000417448 ERC2O15083 957 aa21.47■■□□□ 1.03
VCP-202ENST00000417448 ASGR1P07306 291 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms