RNA–Protein interactions for RNA: ENST00000417122.6

ITGB1-204, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-204ENST00000417122 STAG1Q8WVM7 1258 aa18.47■□□□□ 0.55
ITGB1-204ENST00000417122 DPF3Q92784 378 aa18.47■□□□□ 0.55
ITGB1-204ENST00000417122 GMCL1Q96IK5 515 aa18.47■□□□□ 0.55
ITGB1-204ENST00000417122 MMP19Q99542 508 aa18.47■□□□□ 0.55
ITGB1-204ENST00000417122 HTATIP2Q9BUP3 242 aa18.47■□□□□ 0.55
ITGB1-204ENST00000417122 TEX13BQ9BXU2 312 aa18.47■□□□□ 0.55
ITGB1-204ENST00000417122 NBPF3Q9H094 633 aa18.47■□□□□ 0.55
ITGB1-204ENST00000417122 RNF41Q9H4P4 317 aaPredicted RBP18.47■□□□□ 0.55
ITGB1-204ENST00000417122 OGDHLQ9ULD0 1010 aa18.47■□□□□ 0.55
ITGB1-204ENST00000417122 ISY1Q9ULR0 285 aaKnown RBP18.47■□□□□ 0.55
ITGB1-204ENST00000417122 TMEM232C9JQI7 657 aa18.46■□□□□ 0.55
ITGB1-204ENST00000417122 ZNF213O14771 459 aa18.46■□□□□ 0.55
ITGB1-204ENST00000417122 ATP2A1O14983 1001 aa18.46■□□□□ 0.55
ITGB1-204ENST00000417122 IGHA2P01877 340 aa18.46■□□□□ 0.55
ITGB1-204ENST00000417122 MCCP23508 829 aa18.46■□□□□ 0.55
ITGB1-204ENST00000417122 CYP2C19P33261 490 aa18.46■□□□□ 0.55
ITGB1-204ENST00000417122 TBC1D10CQ8IV04 446 aa18.46■□□□□ 0.55
ITGB1-204ENST00000417122 CHMP4CQ96CF2 233 aa18.46■□□□□ 0.55
ITGB1-204ENST00000417122 PAWRQ96IZ0 340 aaKnown RBP18.46■□□□□ 0.55
ITGB1-204ENST00000417122 DSCC1Q9BVC3 393 aa18.46■□□□□ 0.55
ITGB1-204ENST00000417122 SLC38A10Q9HBR0 1119 aa18.46■□□□□ 0.55
ITGB1-204ENST00000417122 TCP11L1Q9NUJ3 509 aa18.46■□□□□ 0.55
ITGB1-204ENST00000417122 FRMPD3Q5JV73 1810 aa18.45■□□□□ 0.54
ITGB1-204ENST00000417122 STAT2P52630 851 aa18.45■□□□□ 0.54
ITGB1-204ENST00000417122 KCTD2Q14681 263 aa18.45■□□□□ 0.54
ITGB1-204ENST00000417122 NECAB2Q7Z6G3 386 aa18.45■□□□□ 0.54
ITGB1-204ENST00000417122 FAM160B2Q86V87 743 aa18.45■□□□□ 0.54
ITGB1-204ENST00000417122 CPXCR1Q8N123 301 aa18.45■□□□□ 0.54
ITGB1-204ENST00000417122 DIS3LQ8TF46 1054 aaKnown RBP18.45■□□□□ 0.54
ITGB1-204ENST00000417122 CHURC1Q8WUH1 139 aa18.45■□□□□ 0.54
ITGB1-204ENST00000417122 PLXNA1Q9UIW2 1896 aa18.45■□□□□ 0.54
ITGB1-204ENST00000417122 FDX1P10109 184 aa18.44■□□□□ 0.54
ITGB1-204ENST00000417122 CNGA1P29973 690 aa18.44■□□□□ 0.54
ITGB1-204ENST00000417122 SLC4A3P48751 1232 aa18.44■□□□□ 0.54
ITGB1-204ENST00000417122 IKQ13123 557 aaPredicted RBP18.44■□□□□ 0.54
ITGB1-204ENST00000417122 LHX8Q68G74 356 aa18.44■□□□□ 0.54
ITGB1-204ENST00000417122 RCSD1Q6JBY9 416 aa18.44■□□□□ 0.54
ITGB1-204ENST00000417122 KCTD1Q719H9 257 aa18.44■□□□□ 0.54
ITGB1-204ENST00000417122 MAML3Q96JK9 1138 aa18.44■□□□□ 0.54
ITGB1-204ENST00000417122 IL25Q9H293 177 aa18.44■□□□□ 0.54
ITGB1-204ENST00000417122 RAVER2Q9HCJ3 691 aaKnown RBP18.44■□□□□ 0.54
ITGB1-204ENST00000417122 MTMR7Q9Y216 660 aa18.44■□□□□ 0.54
ITGB1-204ENST00000417122 RIPK3Q9Y572 518 aa18.44■□□□□ 0.54
ITGB1-204ENST00000417122 NEDD4P46934 1319 aa18.44■□□□□ 0.54
ITGB1-204ENST00000417122 PLA2G6O60733 806 aa18.43■□□□□ 0.54
ITGB1-204ENST00000417122 PGK2P07205 417 aa18.43■□□□□ 0.54
ITGB1-204ENST00000417122 TOP1P11387 765 aaKnown RBP18.43■□□□□ 0.54
ITGB1-204ENST00000417122 CYBAP13498 195 aa18.43■□□□□ 0.54
ITGB1-204ENST00000417122 MNX1P50219 401 aaPredicted RBP18.43■□□□□ 0.54
ITGB1-204ENST00000417122 OAZ1P54368 228 aa18.43■□□□□ 0.54
ITGB1-204ENST00000417122 IMMTQ16891 758 aaKnown RBP18.43■□□□□ 0.54
ITGB1-204ENST00000417122 ESR2Q92731 530 aa18.43■□□□□ 0.54
ITGB1-204ENST00000417122 TMEM47Q9BQJ4 181 aa18.43■□□□□ 0.54
ITGB1-204ENST00000417122 CTNNA3Q9UI47 895 aa18.43■□□□□ 0.54
ITGB1-204ENST00000417122 RASGRP2Q7LDG7 609 aa18.42■□□□□ 0.54
ITGB1-204ENST00000417122 TRPV1Q8NER1 839 aa18.42■□□□□ 0.54
ITGB1-204ENST00000417122 DCAF4Q8WV16 495 aa18.42■□□□□ 0.54
ITGB1-204ENST00000417122 RUFY2Q8WXA3 655 aa18.42■□□□□ 0.54
ITGB1-204ENST00000417122 TTC14Q96N46 770 aa18.42■□□□□ 0.54
ITGB1-204ENST00000417122 DDX20Q9UHI6 824 aaKnown RBP18.42■□□□□ 0.54
ITGB1-204ENST00000417122 DIS3Q9Y2L1 958 aaKnown RBP18.42■□□□□ 0.54
ITGB1-204ENST00000417122 RAD50Q92878 1312 aa18.42■□□□□ 0.54
ITGB1-204ENST00000417122 MSCO60682 206 aa18.41■□□□□ 0.54
ITGB1-204ENST00000417122 CHMLP26374 656 aa18.41■□□□□ 0.54
ITGB1-204ENST00000417122 NT5C2P49902 561 aa18.41■□□□□ 0.54
ITGB1-204ENST00000417122 CCDC96Q2M329 555 aa18.41■□□□□ 0.54
ITGB1-204ENST00000417122 ZNF792Q3KQV3 632 aa18.41■□□□□ 0.54
ITGB1-204ENST00000417122 C11orf49Q9H6J7 331 aa18.41■□□□□ 0.54
ITGB1-204ENST00000417122 H0YGN5 161 aa18.4■□□□□ 0.54
ITGB1-204ENST00000417122 PRAMEF19Q5SWL8 479 aa18.4■□□□□ 0.54
ITGB1-204ENST00000417122 CHST13Q8NET6 341 aa18.4■□□□□ 0.54
ITGB1-204ENST00000417122 DDX11Q96FC9 970 aa18.4■□□□□ 0.54
ITGB1-204ENST00000417122 ZKSCAN3Q9BRR0 538 aa18.4■□□□□ 0.54
ITGB1-204ENST00000417122 TINF2Q9BSI4 451 aa18.4■□□□□ 0.54
ITGB1-204ENST00000417122 FBXO40Q9UH90 709 aa18.4■□□□□ 0.54
ITGB1-204ENST00000417122 PRR12Q9ULL5 1215 aa18.4■□□□□ 0.54
ITGB1-204ENST00000417122 ALPK3Q96L96 1907 aa18.4■□□□□ 0.54
ITGB1-204ENST00000417122 B4E1Z4 1266 aa18.39■□□□□ 0.53
ITGB1-204ENST00000417122 EVI5O60447 810 aa18.39■□□□□ 0.53
ITGB1-204ENST00000417122 KDM4AO75164 1064 aa18.39■□□□□ 0.53
ITGB1-204ENST00000417122 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.39■□□□□ 0.53
ITGB1-204ENST00000417122 IQCA1Q86XH1 822 aa18.39■□□□□ 0.53
ITGB1-204ENST00000417122 NR2E3Q9Y5X4 410 aa18.39■□□□□ 0.53
ITGB1-204ENST00000417122 ZNF536O15090 1300 aa18.39■□□□□ 0.53
ITGB1-204ENST00000417122 DNAJC25-GNG10A0A024R161 153 aa18.38■□□□□ 0.53
ITGB1-204ENST00000417122 SEPT4O43236 478 aa18.38■□□□□ 0.53
ITGB1-204ENST00000417122 CCDC178Q5BJE1 867 aa18.38■□□□□ 0.53
ITGB1-204ENST00000417122 TTBK2Q6IQ55 1244 aa18.38■□□□□ 0.53
ITGB1-204ENST00000417122 CCDC174Q6PII3 467 aa18.38■□□□□ 0.53
ITGB1-204ENST00000417122 DGKHQ86XP1 1220 aa18.38■□□□□ 0.53
ITGB1-204ENST00000417122 ANKRD35Q8N283 1001 aa18.38■□□□□ 0.53
ITGB1-204ENST00000417122 AGBL1Q96MI9 1066 aa18.38■□□□□ 0.53
ITGB1-204ENST00000417122 HOMER2Q9NSB8 354 aa18.38■□□□□ 0.53
ITGB1-204ENST00000417122 PDHBP11177 359 aa18.37■□□□□ 0.53
ITGB1-204ENST00000417122 SLC16A2P36021 539 aa18.37■□□□□ 0.53
ITGB1-204ENST00000417122 SNAP25P60880 206 aa18.37■□□□□ 0.53
ITGB1-204ENST00000417122 TKFCQ3LXA3 575 aa18.37■□□□□ 0.53
ITGB1-204ENST00000417122 BTNL9Q6UXG8 535 aa18.37■□□□□ 0.53
ITGB1-204ENST00000417122 MSL3Q8N5Y2 521 aaKnown RBP18.37■□□□□ 0.53
ITGB1-204ENST00000417122 KRT23Q9C075 422 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms