RNA–Protein interactions for RNA: ENST00000417033.1

MDC1-203, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-203ENST00000417033 ANKRD1Q15327 319 aa9.41□□□□□ -0.9
MDC1-203ENST00000417033 RTN1Q16799 776 aa9.41□□□□□ -0.9
MDC1-203ENST00000417033 SH3D19Q5HYK7 790 aa9.41□□□□□ -0.9
MDC1-203ENST00000417033 GPAT2Q6NUI2 795 aa9.41□□□□□ -0.9
MDC1-203ENST00000417033 GADL1Q6ZQY3 521 aa9.41□□□□□ -0.9
MDC1-203ENST00000417033 TMTC3Q6ZXV5 915 aa9.41□□□□□ -0.9
MDC1-203ENST00000417033 PRRT2Q7Z6L0 340 aaPredicted RBP9.41□□□□□ -0.9
MDC1-203ENST00000417033 TMTC2Q8N394 836 aa9.41□□□□□ -0.9
MDC1-203ENST00000417033 SRBD1Q8N5C6 995 aaKnown RBP9.41□□□□□ -0.9
MDC1-203ENST00000417033 PIBF1Q8WXW3 757 aa9.41□□□□□ -0.9
MDC1-203ENST00000417033 BRI3BPQ8WY22 251 aa9.41□□□□□ -0.9
MDC1-203ENST00000417033 GTF3C6Q969F1 213 aa9.41□□□□□ -0.9
MDC1-203ENST00000417033 ZNF274Q96GC6 653 aaPredicted RBP9.41□□□□□ -0.9
MDC1-203ENST00000417033 MS4A4AQ96JQ5 239 aa9.41□□□□□ -0.9
MDC1-203ENST00000417033 C12orf42Q96LP6 360 aa9.41□□□□□ -0.9
MDC1-203ENST00000417033 SLKQ9H2G2 1235 aaPredicted RBP9.41□□□□□ -0.9
MDC1-203ENST00000417033 RPAP3Q9H6T3 665 aaPredicted RBP9.41□□□□□ -0.9
MDC1-203ENST00000417033 GOPCQ9HD26 462 aa9.41□□□□□ -0.9
MDC1-203ENST00000417033 LOC285556D6RIA3 1793 aa9.4□□□□□ -0.9
MDC1-203ENST00000417033 CNTNAP5Q8WYK1 1306 aa9.4□□□□□ -0.9
MDC1-203ENST00000417033 CCL15-CCL14A0A0B4J2E2 113 aa9.4□□□□□ -0.9
MDC1-203ENST00000417033 PALM3A6NDB9 673 aaPredicted RBP9.4□□□□□ -0.9
MDC1-203ENST00000417033 UNCXA6NJT0 531 aa9.4□□□□□ -0.9
MDC1-203ENST00000417033 CXCL11O14625 94 aa9.4□□□□□ -0.9
MDC1-203ENST00000417033 CYTH3O43739 400 aa9.4□□□□□ -0.9
MDC1-203ENST00000417033 PEX10O60683 326 aa9.4□□□□□ -0.9
MDC1-203ENST00000417033 AOC2O75106 756 aa9.4□□□□□ -0.9
MDC1-203ENST00000417033 PARP1P09874 1014 aaKnown RBP9.4□□□□□ -0.9
MDC1-203ENST00000417033 BMP3P12645 472 aa9.4□□□□□ -0.9
MDC1-203ENST00000417033 NTRK3Q16288 839 aa9.4□□□□□ -0.9
MDC1-203ENST00000417033 CCL15Q16663 113 aa9.4□□□□□ -0.9
MDC1-203ENST00000417033 PPP4R3BQ5MIZ7 849 aa9.4□□□□□ -0.9
MDC1-203ENST00000417033 POTEEQ6S8J3 1075 aa9.4□□□□□ -0.9
MDC1-203ENST00000417033 SYNE3Q6ZMZ3 975 aa9.4□□□□□ -0.9
MDC1-203ENST00000417033 HSCBQ8IWL3 235 aa9.4□□□□□ -0.9
MDC1-203ENST00000417033 CCDC82Q8N4S0 544 aa9.4□□□□□ -0.9
MDC1-203ENST00000417033 FANCBQ8NB91 859 aa9.4□□□□□ -0.9
MDC1-203ENST00000417033 DCAF4Q8WV16 495 aa9.4□□□□□ -0.9
MDC1-203ENST00000417033 GMCL1Q96IK5 515 aa9.4□□□□□ -0.9
MDC1-203ENST00000417033 SH2D4AQ9H788 454 aa9.4□□□□□ -0.9
MDC1-203ENST00000417033 SYNPO2Q9UMS6 1093 aa9.4□□□□□ -0.9
MDC1-203ENST00000417033 RASSF10A6NK89 507 aa9.39□□□□□ -0.91
MDC1-203ENST00000417033 C19orf81C9J6K1 198 aa9.39□□□□□ -0.91
MDC1-203ENST00000417033 BTBD19C9JJ37 291 aa9.39□□□□□ -0.91
MDC1-203ENST00000417033 TMEM232C9JQI7 657 aa9.39□□□□□ -0.91
MDC1-203ENST00000417033 KLRF2D3W0D1 207 aa9.39□□□□□ -0.91
MDC1-203ENST00000417033 WDR46O15213 610 aaKnown RBP9.39□□□□□ -0.91
MDC1-203ENST00000417033 FOSBP53539 338 aa9.39□□□□□ -0.91
MDC1-203ENST00000417033 USP14P54578 494 aa9.39□□□□□ -0.91
MDC1-203ENST00000417033 SNAPC2Q13487 334 aa9.39□□□□□ -0.91
MDC1-203ENST00000417033 CUL4AQ13619 759 aa9.39□□□□□ -0.91
MDC1-203ENST00000417033 ASPRV1Q53RT3 343 aa9.39□□□□□ -0.91
MDC1-203ENST00000417033 FAM43AQ8N2R8 423 aa9.39□□□□□ -0.91
MDC1-203ENST00000417033 NSUN7Q8NE18 718 aaKnown RBP9.39□□□□□ -0.91
MDC1-203ENST00000417033 CTCFLQ8NI51 663 aaPredicted RBP9.39□□□□□ -0.91
MDC1-203ENST00000417033 PHKBQ93100 1093 aa9.39□□□□□ -0.91
MDC1-203ENST00000417033 CAPNS2Q96L46 248 aa9.39□□□□□ -0.91
MDC1-203ENST00000417033 ZSCAN31Q96LW9 406 aaPredicted RBP9.39□□□□□ -0.91
MDC1-203ENST00000417033 AIFM3Q96NN9 605 aa9.39□□□□□ -0.91
MDC1-203ENST00000417033 PTPN18Q99952 460 aa9.39□□□□□ -0.91
MDC1-203ENST00000417033 TANGO6Q9C0B7 1094 aa9.39□□□□□ -0.91
MDC1-203ENST00000417033 TMOD4Q9NZQ9 345 aa9.39□□□□□ -0.91
MDC1-203ENST00000417033 BAZ2BQ9UIF8 2168 aaKnown RBP9.39□□□□□ -0.91
MDC1-203ENST00000417033 PTPDC1A2A3K4 754 aa9.38□□□□□ -0.91
MDC1-203ENST00000417033 IGF2BP3O00425 579 aaKnown RBP eCLIP9.38□□□□□ -0.91
MDC1-203ENST00000417033 CALM1P0DP23 149 aa9.38□□□□□ -0.91
MDC1-203ENST00000417033 CALM2P0DP24 149 aa9.38□□□□□ -0.91
MDC1-203ENST00000417033 CALM3P0DP25 149 aa9.38□□□□□ -0.91
MDC1-203ENST00000417033 ZBTB48P10074 688 aaPredicted RBP9.38□□□□□ -0.91
MDC1-203ENST00000417033 ANP32AP39687 249 aaKnown RBP9.38□□□□□ -0.91
MDC1-203ENST00000417033 MCM2P49736 904 aa9.38□□□□□ -0.91
MDC1-203ENST00000417033 RCAN1P53805 252 aa9.38□□□□□ -0.91
MDC1-203ENST00000417033 C1QTNF8P60827 252 aa9.38□□□□□ -0.91
MDC1-203ENST00000417033 DEFB115Q30KQ5 88 aa9.38□□□□□ -0.91
MDC1-203ENST00000417033 SYDE2Q5VT97 1194 aa9.38□□□□□ -0.91
MDC1-203ENST00000417033 LPAR1Q92633 364 aa9.38□□□□□ -0.91
MDC1-203ENST00000417033 KIFC2Q96AC6 838 aa9.38□□□□□ -0.91
MDC1-203ENST00000417033 SHISA4Q96DD7 197 aa9.38□□□□□ -0.91
MDC1-203ENST00000417033 ATG4CQ96DT6 458 aa9.38□□□□□ -0.91
MDC1-203ENST00000417033 DDX11Q96FC9 970 aa9.38□□□□□ -0.91
MDC1-203ENST00000417033 HHIPL1Q96JK4 782 aa9.38□□□□□ -0.91
MDC1-203ENST00000417033 VAT1LQ9HCJ6 419 aa9.38□□□□□ -0.91
MDC1-203ENST00000417033 SH2B1Q9NRF2 756 aaPredicted RBP9.38□□□□□ -0.91
MDC1-203ENST00000417033 PRR12Q9ULL5 1215 aa9.38□□□□□ -0.91
MDC1-203ENST00000417033 AGTPBP1Q9UPW5 1226 aa9.38□□□□□ -0.91
MDC1-203ENST00000417033 RLFQ13129 1914 aa9.37□□□□□ -0.91
MDC1-203ENST00000417033 SPDYE16A6NNV3 312 aaPredicted RBP9.37□□□□□ -0.91
MDC1-203ENST00000417033 PPP1R11O60927 126 aaPredicted RBP9.37□□□□□ -0.91
MDC1-203ENST00000417033 FLOT1O75955 427 aa9.37□□□□□ -0.91
MDC1-203ENST00000417033 CYP2C8P10632 490 aa9.37□□□□□ -0.91
MDC1-203ENST00000417033 CETPP11597 493 aa9.37□□□□□ -0.91
MDC1-203ENST00000417033 FDPSP14324 419 aaKnown RBP9.37□□□□□ -0.91
MDC1-203ENST00000417033 KIF5BP33176 963 aa9.37□□□□□ -0.91
MDC1-203ENST00000417033 VEGFBP49765 207 aa9.37□□□□□ -0.91
MDC1-203ENST00000417033 GTF2A2P52657 109 aa9.37□□□□□ -0.91
MDC1-203ENST00000417033 KIF23Q02241 960 aaPredicted RBP9.37□□□□□ -0.91
MDC1-203ENST00000417033 IKQ13123 557 aaPredicted RBP9.37□□□□□ -0.91
MDC1-203ENST00000417033 GPATCH4Q5T3I0 446 aaKnown RBP9.37□□□□□ -0.91
MDC1-203ENST00000417033 BTNL9Q6UXG8 535 aa9.37□□□□□ -0.91
MDC1-203ENST00000417033 CATSPERGQ6ZRH7 1159 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms