RNA–Protein interactions for RNA: ENST00000416789.1

ITGA6-205, Transcript of integrin subunit alpha 6, humanhuman

TSL 3

Gene ITGA6, Length 853 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-205ENST00000416789 HERVK_113P62684 666 aa10.07□□□□□ -0.8
ITGA6-205ENST00000416789 SART3Q15020 963 aaKnown RBP10.07□□□□□ -0.8
ITGA6-205ENST00000416789 POTEEQ6S8J3 1075 aa10.07□□□□□ -0.8
ITGA6-205ENST00000416789 ZNF454Q8N9F8 522 aa10.07□□□□□ -0.8
ITGA6-205ENST00000416789 GPRC5AQ8NFJ5 357 aa10.07□□□□□ -0.8
ITGA6-205ENST00000416789 NCOA7Q8NI08 942 aa10.07□□□□□ -0.8
ITGA6-205ENST00000416789 ACER1Q8TDN7 264 aa10.07□□□□□ -0.8
ITGA6-205ENST00000416789 ANKS1AQ92625 1134 aa10.07□□□□□ -0.8
ITGA6-205ENST00000416789 CEP95Q96GE4 821 aa10.07□□□□□ -0.8
ITGA6-205ENST00000416789 GMCL1Q96IK5 515 aa10.07□□□□□ -0.8
ITGA6-205ENST00000416789 RPAP3Q9H6T3 665 aaPredicted RBP10.07□□□□□ -0.8
ITGA6-205ENST00000416789 EFCC1Q9HA90 598 aa10.07□□□□□ -0.8
ITGA6-205ENST00000416789 TOMM22Q9NS69 142 aa10.07□□□□□ -0.8
ITGA6-205ENST00000416789 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.07□□□□□ -0.8
ITGA6-205ENST00000416789 CLIP2Q9UDT6 1046 aa10.07□□□□□ -0.8
ITGA6-205ENST00000416789 FEM1BQ9UK73 627 aa10.07□□□□□ -0.8
ITGA6-205ENST00000416789 ZNF236Q9UL36 1845 aa10.06□□□□□ -0.8
ITGA6-205ENST00000416789 F5H6K3 240 aa10.06□□□□□ -0.8
ITGA6-205ENST00000416789 PRDM1O75626 825 aa10.06□□□□□ -0.8
ITGA6-205ENST00000416789 MAPK4P31152 587 aa10.06□□□□□ -0.8
ITGA6-205ENST00000416789 LSM11P83369 360 aaKnown RBP eCLIP10.06□□□□□ -0.8
ITGA6-205ENST00000416789 KLRC3Q07444 240 aa10.06□□□□□ -0.8
ITGA6-205ENST00000416789 KRT32Q14532 448 aa10.06□□□□□ -0.8
ITGA6-205ENST00000416789 TSGA10IPQ3SY00 556 aa10.06□□□□□ -0.8
ITGA6-205ENST00000416789 FBXO46Q6PJ61 603 aaPredicted RBP10.06□□□□□ -0.8
ITGA6-205ENST00000416789 RALYLQ86SE5 291 aaKnown RBP10.06□□□□□ -0.8
ITGA6-205ENST00000416789 CCDC84Q86UT8 332 aaPredicted RBP10.06□□□□□ -0.8
ITGA6-205ENST00000416789 FAM160B2Q86V87 743 aa10.06□□□□□ -0.8
ITGA6-205ENST00000416789 TMTC2Q8N394 836 aa10.06□□□□□ -0.8
ITGA6-205ENST00000416789 CHURC1Q8WUH1 139 aa10.06□□□□□ -0.8
ITGA6-205ENST00000416789 DCAF4Q8WV16 495 aa10.06□□□□□ -0.8
ITGA6-205ENST00000416789 LSG1Q9H089 658 aaKnown RBP10.06□□□□□ -0.8
ITGA6-205ENST00000416789 ADAMTS5Q9UNA0 930 aa10.06□□□□□ -0.8
ITGA6-205ENST00000416789 WDR19Q8NEZ3 1342 aa10.06□□□□□ -0.8
ITGA6-205ENST00000416789 ERICH2A1L162 156 aa10.05□□□□□ -0.8
ITGA6-205ENST00000416789 ARHGAP33O14559 1287 aa10.05□□□□□ -0.8
ITGA6-205ENST00000416789 SLC25A27O95847 323 aa10.05□□□□□ -0.8
ITGA6-205ENST00000416789 CYP21A2P08686 494 aa10.05□□□□□ -0.8
ITGA6-205ENST00000416789 HMGB1P09429 215 aaKnown RBP10.05□□□□□ -0.8
ITGA6-205ENST00000416789 CYP2C8P10632 490 aa10.05□□□□□ -0.8
ITGA6-205ENST00000416789 ZKSCAN1P17029 563 aaPredicted RBP10.05□□□□□ -0.8
ITGA6-205ENST00000416789 OAZ1P54368 228 aa10.05□□□□□ -0.8
ITGA6-205ENST00000416789 HAND2P61296 217 aa10.05□□□□□ -0.8
ITGA6-205ENST00000416789 ATP2B2Q01814 1243 aa10.05□□□□□ -0.8
ITGA6-205ENST00000416789 MMRN1Q13201 1228 aa10.05□□□□□ -0.8
ITGA6-205ENST00000416789 NECTIN1Q15223 517 aa10.05□□□□□ -0.8
ITGA6-205ENST00000416789 SHROOM1Q2M3G4 852 aaPredicted RBP10.05□□□□□ -0.8
ITGA6-205ENST00000416789 FAM47AQ5JRC9 791 aa10.05□□□□□ -0.8
ITGA6-205ENST00000416789 RRP12Q5JTH9 1297 aaKnown RBP10.05□□□□□ -0.8
ITGA6-205ENST00000416789 TBC1D10CQ8IV04 446 aa10.05□□□□□ -0.8
ITGA6-205ENST00000416789 TRMT44Q8IYL2 757 aaKnown RBP10.05□□□□□ -0.8
ITGA6-205ENST00000416789 PRPF38AQ8NAV1 312 aaKnown RBP10.05□□□□□ -0.8
ITGA6-205ENST00000416789 SHCBP1Q8NEM2 672 aa10.05□□□□□ -0.8
ITGA6-205ENST00000416789 COA7Q96BR5 231 aa10.05□□□□□ -0.8
ITGA6-205ENST00000416789 P2RX7Q99572 595 aaKnown RBP10.05□□□□□ -0.8
ITGA6-205ENST00000416789 UBAC1Q9BSL1 405 aa10.05□□□□□ -0.8
ITGA6-205ENST00000416789 TANGO6Q9C0B7 1094 aa10.05□□□□□ -0.8
ITGA6-205ENST00000416789 MAF1Q9H063 256 aa10.05□□□□□ -0.8
ITGA6-205ENST00000416789 NBPF3Q9H094 633 aa10.05□□□□□ -0.8
ITGA6-205ENST00000416789 ANO2Q9NQ90 1003 aa10.05□□□□□ -0.8
ITGA6-205ENST00000416789 CPA4Q9UI42 421 aa10.05□□□□□ -0.8
ITGA6-205ENST00000416789 TSKSQ9UJT2 592 aa10.05□□□□□ -0.8
ITGA6-205ENST00000416789 STX8Q9UNK0 236 aa10.05□□□□□ -0.8
ITGA6-205ENST00000416789 RBM8AQ9Y5S9 174 aaKnown RBP10.05□□□□□ -0.8
ITGA6-205ENST00000416789 RBBP6Q7Z6E9 1792 aaKnown RBP10.05□□□□□ -0.8
ITGA6-205ENST00000416789 PLXNB2O15031 1838 aa10.05□□□□□ -0.8
ITGA6-205ENST00000416789 SMIM22K7EJ46 135 aa10.04□□□□□ -0.8
ITGA6-205ENST00000416789 ATP2A1O14983 1001 aa10.04□□□□□ -0.8
ITGA6-205ENST00000416789 STRNO43815 780 aa10.04□□□□□ -0.8
ITGA6-205ENST00000416789 FLOT1O75955 427 aa10.04□□□□□ -0.8
ITGA6-205ENST00000416789 NDUFB10O96000 172 aa10.04□□□□□ -0.8
ITGA6-205ENST00000416789 BMP3P12645 472 aa10.04□□□□□ -0.8
ITGA6-205ENST00000416789 SLC1A4P43007 532 aa10.04□□□□□ -0.8
ITGA6-205ENST00000416789 PSMC4P43686 418 aa10.04□□□□□ -0.8
ITGA6-205ENST00000416789 FOSBP53539 338 aa10.04□□□□□ -0.8
ITGA6-205ENST00000416789 ERVK-9P63128 1117 aa10.04□□□□□ -0.8
ITGA6-205ENST00000416789 ERVK-24P63145 666 aa10.04□□□□□ -0.8
ITGA6-205ENST00000416789 PTH1RQ03431 593 aa10.04□□□□□ -0.8
ITGA6-205ENST00000416789 DGKZQ13574 1117 aa10.04□□□□□ -0.8
ITGA6-205ENST00000416789 ZYXQ15942 572 aaKnown RBP10.04□□□□□ -0.8
ITGA6-205ENST00000416789 GPATCH4Q5T3I0 446 aaKnown RBP10.04□□□□□ -0.8
ITGA6-205ENST00000416789 SLFN13Q68D06 897 aa10.04□□□□□ -0.8
ITGA6-205ENST00000416789 OTOP1Q7RTM1 612 aa10.04□□□□□ -0.8
ITGA6-205ENST00000416789 NBPF11Q86T75 865 aa10.04□□□□□ -0.8
ITGA6-205ENST00000416789 CCAR1Q8IX12 1150 aaKnown RBP10.04□□□□□ -0.8
ITGA6-205ENST00000416789 TNS4Q8IZW8 715 aa10.04□□□□□ -0.8
ITGA6-205ENST00000416789 STK11IPQ8N1F8 1099 aa10.04□□□□□ -0.8
ITGA6-205ENST00000416789 ANKRD13CQ8N6S4 541 aa10.04□□□□□ -0.8
ITGA6-205ENST00000416789 SOCS4Q8WXH5 440 aa10.04□□□□□ -0.8
ITGA6-205ENST00000416789 ZSCAN10Q96SZ4 725 aaPredicted RBP10.04□□□□□ -0.8
ITGA6-205ENST00000416789 SLF1Q9BQI6 1058 aa10.04□□□□□ -0.8
ITGA6-205ENST00000416789 R3HDMLQ9H3Y0 253 aa10.04□□□□□ -0.8
ITGA6-205ENST00000416789 IL17RBQ9NRM6 502 aa10.04□□□□□ -0.8
ITGA6-205ENST00000416789 ZSWIM5Q9P217 1185 aa10.04□□□□□ -0.8
ITGA6-205ENST00000416789 PPP1R9AQ9ULJ8 1098 aa10.04□□□□□ -0.8
ITGA6-205ENST00000416789 TRIM17Q9Y577 477 aa10.04□□□□□ -0.8
ITGA6-205ENST00000416789 B4E1Z4 1266 aa10.03□□□□□ -0.8
ITGA6-205ENST00000416789 E7EWF7 191 aa10.03□□□□□ -0.8
ITGA6-205ENST00000416789 KDM4AO75164 1064 aa10.03□□□□□ -0.8
ITGA6-205ENST00000416789 FMNL1O95466 1100 aaPredicted RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms