RNA–Protein interactions for RNA: ENST00000416571.5

MDC1-202, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-202ENST00000416571 MSL3Q8N5Y2 521 aaKnown RBP12.04□□□□□ -0.48
MDC1-202ENST00000416571 PANK1Q8TE04 598 aa12.04□□□□□ -0.48
MDC1-202ENST00000416571 LENG1Q96BZ8 264 aaPredicted RBP12.04□□□□□ -0.48
MDC1-202ENST00000416571 TOX2Q96NM4 488 aa12.04□□□□□ -0.48
MDC1-202ENST00000416571 SLF1Q9BQI6 1058 aa12.04□□□□□ -0.48
MDC1-202ENST00000416571 TEX13BQ9BXU2 312 aa12.04□□□□□ -0.48
MDC1-202ENST00000416571 BOLA2Q9H3K6 86 aa12.04□□□□□ -0.48
MDC1-202ENST00000416571 ZNF214Q9UL59 606 aaPredicted RBP12.04□□□□□ -0.48
MDC1-202ENST00000416571 FAM184BQ9ULE4 1060 aa12.04□□□□□ -0.48
MDC1-202ENST00000416571 SLC4A4Q9Y6R1 1079 aa12.04□□□□□ -0.48
MDC1-202ENST00000416571 MROH7Q68CQ1 1323 aa12.04□□□□□ -0.48
MDC1-202ENST00000416571 SYNRGQ9UMZ2 1314 aa12.04□□□□□ -0.48
MDC1-202ENST00000416571 MOXD2PA6NHM9 499 aa12.03□□□□□ -0.48
MDC1-202ENST00000416571 RAB11FIP3O75154 756 aa12.03□□□□□ -0.48
MDC1-202ENST00000416571 FAAP100Q0VG06 881 aa12.03□□□□□ -0.48
MDC1-202ENST00000416571 UBE3CQ15386 1083 aa12.03□□□□□ -0.48
MDC1-202ENST00000416571 SNRNP48Q6IEG0 339 aaKnown RBP12.03□□□□□ -0.48
MDC1-202ENST00000416571 ANKRD33Q7Z3H0 272 aa12.03□□□□□ -0.48
MDC1-202ENST00000416571 VTI1AQ96AJ9 217 aa12.03□□□□□ -0.48
MDC1-202ENST00000416571 GLT1D1Q96MS3 346 aa12.03□□□□□ -0.48
MDC1-202ENST00000416571 SPC25Q9HBM1 224 aa12.03□□□□□ -0.48
MDC1-202ENST00000416571 ARPP21Q9UBL0 812 aaPredicted RBP12.03□□□□□ -0.48
MDC1-202ENST00000416571 SYNGAP1Q96PV0 1343 aa12.03□□□□□ -0.48
MDC1-202ENST00000416571 TIMP1P01033 207 aa12.02□□□□□ -0.49
MDC1-202ENST00000416571 C6orf222P0C671 652 aaPredicted RBP12.02□□□□□ -0.49
MDC1-202ENST00000416571 ATP5JP18859 108 aa12.02□□□□□ -0.49
MDC1-202ENST00000416571 PPIGQ13427 754 aaKnown RBP eCLIP12.02□□□□□ -0.49
MDC1-202ENST00000416571 GRIN2CQ14957 1233 aa12.02□□□□□ -0.49
MDC1-202ENST00000416571 KCNA10Q16322 511 aa12.02□□□□□ -0.49
MDC1-202ENST00000416571 SLFNL1Q499Z3 407 aa12.02□□□□□ -0.49
MDC1-202ENST00000416571 TJAP1Q5JTD0 557 aa12.02□□□□□ -0.49
MDC1-202ENST00000416571 CCDC129Q6ZRS4 1044 aa12.02□□□□□ -0.49
MDC1-202ENST00000416571 PCSK9Q8NBP7 692 aaKnown RBP12.02□□□□□ -0.49
MDC1-202ENST00000416571 REPS2Q8NFH8 660 aa12.02□□□□□ -0.49
MDC1-202ENST00000416571 TIFAQ96CG3 184 aa12.02□□□□□ -0.49
MDC1-202ENST00000416571 GAS2L1Q99501 681 aaPredicted RBP12.02□□□□□ -0.49
MDC1-202ENST00000416571 ZNF576Q9H609 170 aa12.02□□□□□ -0.49
MDC1-202ENST00000416571 ZBED9Q6R2W3 1325 aa12.02□□□□□ -0.49
MDC1-202ENST00000416571 PIEZO1Q92508 2521 aa12.01□□□□□ -0.49
MDC1-202ENST00000416571 SMIM22K7EJ46 135 aa12.01□□□□□ -0.49
MDC1-202ENST00000416571 TLR3O15455 904 aaKnown RBP12.01□□□□□ -0.49
MDC1-202ENST00000416571 ZBED4O75132 1171 aa12.01□□□□□ -0.49
MDC1-202ENST00000416571 DUSP11O75319 330 aaKnown RBP12.01□□□□□ -0.49
MDC1-202ENST00000416571 MFSD5Q6N075 450 aa12.01□□□□□ -0.49
MDC1-202ENST00000416571 CTR9Q6PD62 1173 aa12.01□□□□□ -0.49
MDC1-202ENST00000416571 CPXCR1Q8N123 301 aa12.01□□□□□ -0.49
MDC1-202ENST00000416571 ANKRD35Q8N283 1001 aa12.01□□□□□ -0.49
MDC1-202ENST00000416571 TMEM199Q8N511 208 aa12.01□□□□□ -0.49
MDC1-202ENST00000416571 PRPF38AQ8NAV1 312 aaKnown RBP12.01□□□□□ -0.49
MDC1-202ENST00000416571 NUP88Q99567 741 aaPredicted RBP12.01□□□□□ -0.49
MDC1-202ENST00000416571 HAUS7Q99871 368 aa12.01□□□□□ -0.49
MDC1-202ENST00000416571 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.01□□□□□ -0.499e-7■□□□□ 10.2
MDC1-202ENST00000416571 MKNK2Q9HBH9 465 aa12.01□□□□□ -0.49
MDC1-202ENST00000416571 DDX19BQ9UMR2 479 aa12.01□□□□□ -0.49
MDC1-202ENST00000416571 ELP1O95163 1332 aa12.01□□□□□ -0.49
MDC1-202ENST00000416571 CDH23Q9H251 3354 aa12□□□□□ -0.49
MDC1-202ENST00000416571 GREB1LQ9C091 1923 aaPredicted RBP12□□□□□ -0.49
MDC1-202ENST00000416571 MYH4Q9Y623 1939 aa12□□□□□ -0.49
MDC1-202ENST00000416571 A0A0U1RQG5 324 aaPredicted RBP12□□□□□ -0.49
MDC1-202ENST00000416571 F5H6K3 240 aa12□□□□□ -0.49
MDC1-202ENST00000416571 SNAI1O95863 264 aaPredicted RBP12□□□□□ -0.49
MDC1-202ENST00000416571 ASGR1P07306 291 aa12□□□□□ -0.49
MDC1-202ENST00000416571 KLRC3Q07444 240 aa12□□□□□ -0.49
MDC1-202ENST00000416571 ACVR2BQ13705 512 aa12□□□□□ -0.49
MDC1-202ENST00000416571 MAMDC4Q6UXC1 1216 aa12□□□□□ -0.49
MDC1-202ENST00000416571 STK11IPQ8N1F8 1099 aa12□□□□□ -0.49
MDC1-202ENST00000416571 KLHDC9Q8NEP7 349 aa12□□□□□ -0.49
MDC1-202ENST00000416571 KIFC2Q96AC6 838 aa12□□□□□ -0.49
MDC1-202ENST00000416571 ABHD16BQ9H3Z7 469 aa12□□□□□ -0.49
MDC1-202ENST00000416571 CHMP4BQ9H444 224 aaKnown RBP12□□□□□ -0.49
MDC1-202ENST00000416571 CDKN2AIPQ9NXV6 580 aaPredicted RBP12□□□□□ -0.49
MDC1-202ENST00000416571 NYAP2Q9P242 653 aa12□□□□□ -0.49
MDC1-202ENST00000416571 FBXO40Q9UH90 709 aa12□□□□□ -0.49
MDC1-202ENST00000416571 TBX21Q9UL17 535 aa12□□□□□ -0.49
MDC1-202ENST00000416571 MYADML2A6NDP7 307 aa11.99□□□□□ -0.49
MDC1-202ENST00000416571 MINDY4BA8MYZ0 360 aa11.99□□□□□ -0.49
MDC1-202ENST00000416571 NDUFB10O96000 172 aa11.99□□□□□ -0.49
MDC1-202ENST00000416571 CHGBP05060 677 aa11.99□□□□□ -0.49
MDC1-202ENST00000416571 CST5P28325 142 aaPredicted RBP11.99□□□□□ -0.49
MDC1-202ENST00000416571 GNASQ5JWF2 1037 aa11.99□□□□□ -0.49
MDC1-202ENST00000416571 PSRC1Q6PGN9 363 aaPredicted RBP11.99□□□□□ -0.49
MDC1-202ENST00000416571 ZNF467Q7Z7K2 595 aaPredicted RBP11.99□□□□□ -0.49
MDC1-202ENST00000416571 PPM1EQ8WY54 764 aa11.99□□□□□ -0.49
MDC1-202ENST00000416571 PPP1R12CQ9BZL4 782 aa11.99□□□□□ -0.49
MDC1-202ENST00000416571 PUS7LQ9H0K6 701 aaKnown RBP11.99□□□□□ -0.49
MDC1-202ENST00000416571 ZNF287Q9HBT7 754 aa11.99□□□□□ -0.49
MDC1-202ENST00000416571 ISY1Q9ULR0 285 aaKnown RBP11.99□□□□□ -0.49
MDC1-202ENST00000416571 RIPK3Q9Y572 518 aa11.99□□□□□ -0.49
MDC1-202ENST00000416571 MCM3APO60318 1980 aa11.98□□□□□ -0.49
MDC1-202ENST00000416571 DNAJC25-GNG10A0A024R161 153 aa11.98□□□□□ -0.49
MDC1-202ENST00000416571 ARVCFO00192 962 aa11.98□□□□□ -0.49
MDC1-202ENST00000416571 ATP2A1O14983 1001 aa11.98□□□□□ -0.49
MDC1-202ENST00000416571 CSF2RAP15509 400 aa11.98□□□□□ -0.49
MDC1-202ENST00000416571 RASA1P20936 1047 aa11.98□□□□□ -0.49
MDC1-202ENST00000416571 CCDC144BQ3MJ40 725 aa11.98□□□□□ -0.49
MDC1-202ENST00000416571 SBK1Q52WX2 424 aa11.98□□□□□ -0.49
MDC1-202ENST00000416571 CCSAPQ6IQ19 270 aaPredicted RBP11.98□□□□□ -0.49
MDC1-202ENST00000416571 NOL8Q76FK4 1167 aaKnown RBP11.98□□□□□ -0.49
MDC1-202ENST00000416571 ARMCX2Q7L311 632 aa11.98□□□□□ -0.49
MDC1-202ENST00000416571 USP38Q8NB14 1042 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms