RNA–Protein interactions for RNA: ENST00000416321.5

DEPDC4-203, Transcript of DEP domain containing 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DEPDC4, Length 1,155 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-203ENST00000416321 PIGSQ96S52 555 aa11.71□□□□□ -0.53
DEPDC4-203ENST00000416321 CPVLQ9H3G5 476 aa11.71□□□□□ -0.53
DEPDC4-203ENST00000416321 RIOX1Q9H6W3 641 aa11.71□□□□□ -0.53
DEPDC4-203ENST00000416321 SH3GLB2Q9NR46 395 aa11.71□□□□□ -0.53
DEPDC4-203ENST00000416321 GJB4Q9NTQ9 266 aa11.71□□□□□ -0.53
DEPDC4-203ENST00000416321 CFAP45Q9UL16 551 aa11.71□□□□□ -0.53
DEPDC4-203ENST00000416321 KCNJ14Q9UNX9 436 aa11.71□□□□□ -0.53
DEPDC4-203ENST00000416321 TMEM232C9JQI7 657 aa11.7□□□□□ -0.54
DEPDC4-203ENST00000416321 FIBPO43427 364 aa11.7□□□□□ -0.54
DEPDC4-203ENST00000416321 CYTH3O43739 400 aa11.7□□□□□ -0.54
DEPDC4-203ENST00000416321 SLC16A2P36021 539 aa11.7□□□□□ -0.54
DEPDC4-203ENST00000416321 STAT2P52630 851 aa11.7□□□□□ -0.54
DEPDC4-203ENST00000416321 NAPAP54920 295 aa11.7□□□□□ -0.54
DEPDC4-203ENST00000416321 MAP3K9P80192 1104 aa11.7□□□□□ -0.54
DEPDC4-203ENST00000416321 NOL9Q5SY16 702 aaKnown RBP11.7□□□□□ -0.54
DEPDC4-203ENST00000416321 SYDE2Q5VT97 1194 aa11.7□□□□□ -0.54
DEPDC4-203ENST00000416321 ATL3Q6DD88 541 aa11.7□□□□□ -0.54
DEPDC4-203ENST00000416321 TTBK2Q6IQ55 1244 aa11.7□□□□□ -0.54
DEPDC4-203ENST00000416321 GALNT17Q6IS24 598 aa11.7□□□□□ -0.54
DEPDC4-203ENST00000416321 ARMC9Q7Z3E5 817 aa11.7□□□□□ -0.54
DEPDC4-203ENST00000416321 CCDC84Q86UT8 332 aaPredicted RBP11.7□□□□□ -0.54
DEPDC4-203ENST00000416321 ADGRF4Q8IZF3 695 aa11.7□□□□□ -0.54
DEPDC4-203ENST00000416321 CHURC1Q8WUH1 139 aa11.7□□□□□ -0.54
DEPDC4-203ENST00000416321 LPAR1Q92633 364 aa11.7□□□□□ -0.54
DEPDC4-203ENST00000416321 GPKOWQ92917 476 aaPredicted RBP eCLIP11.7□□□□□ -0.54
DEPDC4-203ENST00000416321 ZKSCAN4Q969J2 545 aaPredicted RBP11.7□□□□□ -0.54
DEPDC4-203ENST00000416321 NUP88Q99567 741 aaPredicted RBP11.7□□□□□ -0.54
DEPDC4-203ENST00000416321 GLIS2Q9BZE0 524 aaPredicted RBP11.7□□□□□ -0.54
DEPDC4-203ENST00000416321 SCAND2PQ9GZW5 306 aaPredicted RBP11.7□□□□□ -0.54
DEPDC4-203ENST00000416321 KIAA1683Q9H0B3 1180 aa11.7□□□□□ -0.54
DEPDC4-203ENST00000416321 FOXP1Q9H334 677 aaPredicted RBP11.7□□□□□ -0.54
DEPDC4-203ENST00000416321 RRAGCQ9HB90 399 aa11.7□□□□□ -0.54
DEPDC4-203ENST00000416321 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.7□□□□□ -0.54
DEPDC4-203ENST00000416321 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.7□□□□□ -0.54
DEPDC4-203ENST00000416321 CNPY2Q9Y2B0 182 aa11.7□□□□□ -0.54
DEPDC4-203ENST00000416321 SSC5DA1L4H1 1573 aa11.7□□□□□ -0.54
DEPDC4-203ENST00000416321 PNMA6FA0A0J9YX94 578 aa11.69□□□□□ -0.54
DEPDC4-203ENST00000416321 POTECB2RU33 542 aa11.69□□□□□ -0.54
DEPDC4-203ENST00000416321 USP17L10C9JJH3 530 aa11.69□□□□□ -0.54
DEPDC4-203ENST00000416321 ZBTB5O15062 677 aa11.69□□□□□ -0.54
DEPDC4-203ENST00000416321 WDR46O15213 610 aaKnown RBP11.69□□□□□ -0.54
DEPDC4-203ENST00000416321 USP2O75604 605 aaPredicted RBP11.69□□□□□ -0.54
DEPDC4-203ENST00000416321 PTPRAP18433 802 aa11.69□□□□□ -0.54
DEPDC4-203ENST00000416321 GNA11P29992 359 aa11.69□□□□□ -0.54
DEPDC4-203ENST00000416321 MNX1P50219 401 aaPredicted RBP11.69□□□□□ -0.54
DEPDC4-203ENST00000416321 TRAF1Q13077 416 aa11.69□□□□□ -0.54
DEPDC4-203ENST00000416321 FAM83BQ5T0W9 1011 aa11.69□□□□□ -0.54
DEPDC4-203ENST00000416321 WWC2Q6AWC2 1192 aa11.69□□□□□ -0.54
DEPDC4-203ENST00000416321 FAM160B2Q86V87 743 aa11.69□□□□□ -0.54
DEPDC4-203ENST00000416321 ZNF280CQ8ND82 737 aa11.69□□□□□ -0.54
DEPDC4-203ENST00000416321 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.69□□□□□ -0.54
DEPDC4-203ENST00000416321 WDR18Q9BV38 432 aa11.69□□□□□ -0.54
DEPDC4-203ENST00000416321 PHF20Q9BVI0 1012 aa11.69□□□□□ -0.54
DEPDC4-203ENST00000416321 C6orf50Q9HD87 102 aa11.69□□□□□ -0.54
DEPDC4-203ENST00000416321 BARHL2Q9NY43 387 aa11.69□□□□□ -0.54
DEPDC4-203ENST00000416321 TMOD4Q9NZQ9 345 aa11.69□□□□□ -0.54
DEPDC4-203ENST00000416321 NOL7Q9UMY1 257 aaKnown RBP11.69□□□□□ -0.54
DEPDC4-203ENST00000416321 ZHX2Q9Y6X8 837 aa11.69□□□□□ -0.54
DEPDC4-203ENST00000416321 MYH15Q9Y2K3 1946 aa11.68□□□□□ -0.54
DEPDC4-203ENST00000416321 BAZ2BQ9UIF8 2168 aaKnown RBP11.68□□□□□ -0.54
DEPDC4-203ENST00000416321 GOLGA6L4A6NEF3 574 aa11.68□□□□□ -0.54
DEPDC4-203ENST00000416321 TRIM75PA6NK02 468 aa11.68□□□□□ -0.54
DEPDC4-203ENST00000416321 PRPF40AO75400 957 aaKnown RBP11.68□□□□□ -0.54
DEPDC4-203ENST00000416321 GABBR2O75899 941 aa11.68□□□□□ -0.54
DEPDC4-203ENST00000416321 SPP2Q13103 211 aa11.68□□□□□ -0.54
DEPDC4-203ENST00000416321 MTMR2Q13614 643 aa11.68□□□□□ -0.54
DEPDC4-203ENST00000416321 CDC37Q16543 378 aaPredicted RBP11.68□□□□□ -0.54
DEPDC4-203ENST00000416321 SKOR2Q2VWA4 1001 aaPredicted RBP11.68□□□□□ -0.54
DEPDC4-203ENST00000416321 MYSM1Q5VVJ2 828 aa11.68□□□□□ -0.54
DEPDC4-203ENST00000416321 PPP1R18Q6NYC8 613 aa11.68□□□□□ -0.54
DEPDC4-203ENST00000416321 FAM173BQ6P4H8 233 aa11.68□□□□□ -0.54
DEPDC4-203ENST00000416321 LDHDQ86WU2 507 aa11.68□□□□□ -0.54
DEPDC4-203ENST00000416321 NOSTRINQ8IVI9 506 aa11.68□□□□□ -0.54
DEPDC4-203ENST00000416321 ANKRD13AQ8IZ07 590 aa11.68□□□□□ -0.54
DEPDC4-203ENST00000416321 BICD2Q8TD16 824 aa11.68□□□□□ -0.54
DEPDC4-203ENST00000416321 SPATA32Q96LK8 384 aa11.68□□□□□ -0.54
DEPDC4-203ENST00000416321 JMJD4Q9H9V9 463 aa11.68□□□□□ -0.54
DEPDC4-203ENST00000416321 FEM1BQ9UK73 627 aa11.68□□□□□ -0.54
DEPDC4-203ENST00000416321 PCDHA4Q9UN74 947 aa11.68□□□□□ -0.54
DEPDC4-203ENST00000416321 FZD1Q9UP38 647 aa11.68□□□□□ -0.54
DEPDC4-203ENST00000416321 CTDP1Q9Y5B0 961 aaPredicted RBP11.68□□□□□ -0.54
DEPDC4-203ENST00000416321 BTBD18B2RXH4 712 aa11.67□□□□□ -0.54
DEPDC4-203ENST00000416321 KIF28PB7ZC32 967 aa11.67□□□□□ -0.54
DEPDC4-203ENST00000416321 C19orf81C9J6K1 198 aa11.67□□□□□ -0.54
DEPDC4-203ENST00000416321 STXBP3O00186 592 aa11.67□□□□□ -0.54
DEPDC4-203ENST00000416321 U2AF2P26368 475 aaKnown RBP eCLIP11.67□□□□□ -0.54
DEPDC4-203ENST00000416321 BACE1P56817 501 aa11.67□□□□□ -0.54
DEPDC4-203ENST00000416321 VGLL4Q14135 290 aa11.67□□□□□ -0.54
DEPDC4-203ENST00000416321 SF3A1Q15459 793 aaKnown RBP11.67□□□□□ -0.54
DEPDC4-203ENST00000416321 SLC35G1Q2M3R5 365 aa11.67□□□□□ -0.54
DEPDC4-203ENST00000416321 MAP1SQ66K74 1059 aaPredicted RBP11.67□□□□□ -0.54
DEPDC4-203ENST00000416321 BTNL9Q6UXG8 535 aa11.67□□□□□ -0.54
DEPDC4-203ENST00000416321 BLIDQ8IZY5 108 aa11.67□□□□□ -0.54
DEPDC4-203ENST00000416321 ZNF526Q8TF50 670 aaPredicted RBP11.67□□□□□ -0.54
DEPDC4-203ENST00000416321 CHAMP1Q96JM3 812 aa11.67□□□□□ -0.54
DEPDC4-203ENST00000416321 TANGO6Q9C0B7 1094 aa11.67□□□□□ -0.54
DEPDC4-203ENST00000416321 ZNF408Q9H9D4 720 aa11.67□□□□□ -0.54
DEPDC4-203ENST00000416321 GDPD2Q9HCC8 539 aa11.67□□□□□ -0.54
DEPDC4-203ENST00000416321 TFIP11Q9UBB9 837 aaKnown RBP11.67□□□□□ -0.54
DEPDC4-203ENST00000416321 CCDC194A0A1B0GVG4 234 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms