RNA–Protein interactions for RNA: ENST00000415886.2

CTHRC1-202, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 2 BASIC

Gene CTHRC1, Length 571 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-202ENST00000415886 ANKRD33Q7Z3H0 272 aa15.87■□□□□ 0.13
CTHRC1-202ENST00000415886 GPATCH3Q96I76 525 aa15.87■□□□□ 0.13
CTHRC1-202ENST00000415886 BOLA2Q9H3K6 86 aa15.87■□□□□ 0.13
CTHRC1-202ENST00000415886 DCTPP1Q9H773 170 aa15.87■□□□□ 0.13
CTHRC1-202ENST00000415886 CNPY2Q9Y2B0 182 aa15.87■□□□□ 0.13
CTHRC1-202ENST00000415886 MYADML2A6NDP7 307 aa15.86■□□□□ 0.13
CTHRC1-202ENST00000415886 ATP5JP18859 108 aa15.86■□□□□ 0.13
CTHRC1-202ENST00000415886 IRX5P78411 483 aaPredicted RBP15.86■□□□□ 0.13
CTHRC1-202ENST00000415886 KLHDC9Q8NEP7 349 aa15.86■□□□□ 0.13
CTHRC1-202ENST00000415886 NUP133Q8WUM0 1156 aa15.86■□□□□ 0.13
CTHRC1-202ENST00000415886 TOX2Q96NM4 488 aa15.86■□□□□ 0.13
CTHRC1-202ENST00000415886 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.86■□□□□ 0.13
CTHRC1-202ENST00000415886 TSEN34Q9BSV6 310 aaKnown RBP15.86■□□□□ 0.13
CTHRC1-202ENST00000415886 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.86■□□□□ 0.13
CTHRC1-202ENST00000415886 ZNF576Q9H609 170 aa15.86■□□□□ 0.13
CTHRC1-202ENST00000415886 KANSL2Q9H9L4 492 aa15.86■□□□□ 0.13
CTHRC1-202ENST00000415886 GOPCQ9HD26 462 aa15.86■□□□□ 0.13
CTHRC1-202ENST00000415886 PAG1Q9NWQ8 432 aa15.86■□□□□ 0.13
CTHRC1-202ENST00000415886 ZHX1Q9UKY1 873 aaPredicted RBP15.86■□□□□ 0.13
CTHRC1-202ENST00000415886 SMARCA5O60264 1052 aaPredicted RBP15.85■□□□□ 0.13
CTHRC1-202ENST00000415886 SNAI1O95863 264 aaPredicted RBP15.85■□□□□ 0.13
CTHRC1-202ENST00000415886 COPB2P35606 906 aa15.85■□□□□ 0.13
CTHRC1-202ENST00000415886 KCNA10Q16322 511 aa15.85■□□□□ 0.13
CTHRC1-202ENST00000415886 TJAP1Q5JTD0 557 aa15.85■□□□□ 0.13
CTHRC1-202ENST00000415886 CCSAPQ6IQ19 270 aaPredicted RBP15.85■□□□□ 0.13
CTHRC1-202ENST00000415886 AMOTL1Q8IY63 956 aa15.85■□□□□ 0.13
CTHRC1-202ENST00000415886 TIFAQ96CG3 184 aa15.85■□□□□ 0.13
CTHRC1-202ENST00000415886 NUP88Q99567 741 aaPredicted RBP15.85■□□□□ 0.13
CTHRC1-202ENST00000415886 TBX21Q9UL17 535 aa15.85■□□□□ 0.13
CTHRC1-202ENST00000415886 FAM184BQ9ULE4 1060 aa15.85■□□□□ 0.13
CTHRC1-202ENST00000415886 MOXD2PA6NHM9 499 aa15.84■□□□□ 0.13
CTHRC1-202ENST00000415886 TIMP1P01033 207 aa15.84■□□□□ 0.13
CTHRC1-202ENST00000415886 PBX2P40425 430 aa15.84■□□□□ 0.13
CTHRC1-202ENST00000415886 SNRNP48Q6IEG0 339 aaKnown RBP15.84■□□□□ 0.13
CTHRC1-202ENST00000415886 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.84■□□□□ 0.13
CTHRC1-202ENST00000415886 TEX13BQ9BXU2 312 aa15.84■□□□□ 0.13
CTHRC1-202ENST00000415886 RIPK3Q9Y572 518 aa15.84■□□□□ 0.13
CTHRC1-202ENST00000415886 SYNGAP1Q96PV0 1343 aa15.84■□□□□ 0.13
CTHRC1-202ENST00000415886 GREB1LQ9C091 1923 aaPredicted RBP15.84■□□□□ 0.13
CTHRC1-202ENST00000415886 PRUNE2Q8WUY3 3088 aa15.83■□□□□ 0.13
CTHRC1-202ENST00000415886 GRXCR1A8MXD5 290 aa15.83■□□□□ 0.12
CTHRC1-202ENST00000415886 ADCY6O43306 1168 aa15.83■□□□□ 0.12
CTHRC1-202ENST00000415886 MFSD5Q6N075 450 aa15.83■□□□□ 0.12
CTHRC1-202ENST00000415886 ZSCAN25Q6NSZ9 544 aa15.83■□□□□ 0.12
CTHRC1-202ENST00000415886 CTR9Q6PD62 1173 aa15.83■□□□□ 0.12
CTHRC1-202ENST00000415886 C16orf59Q7L2K0 433 aa15.83■□□□□ 0.12
CTHRC1-202ENST00000415886 MSL3Q8N5Y2 521 aaKnown RBP15.83■□□□□ 0.12
CTHRC1-202ENST00000415886 PPM1EQ8WY54 764 aa15.83■□□□□ 0.12
CTHRC1-202ENST00000415886 DDX11Q96FC9 970 aa15.83■□□□□ 0.12
CTHRC1-202ENST00000415886 CRBNQ96SW2 442 aa15.83■□□□□ 0.12
CTHRC1-202ENST00000415886 SLF1Q9BQI6 1058 aa15.83■□□□□ 0.12
CTHRC1-202ENST00000415886 PBX4Q9BYU1 374 aa15.83■□□□□ 0.12
CTHRC1-202ENST00000415886 ECHDC1Q9NTX5 307 aa15.83■□□□□ 0.12
CTHRC1-202ENST00000415886 SLC4A4Q9Y6R1 1079 aa15.83■□□□□ 0.12
CTHRC1-202ENST00000415886 DNAJC25-GNG10A0A024R161 153 aa15.82■□□□□ 0.12
CTHRC1-202ENST00000415886 DUSP11O75319 330 aaKnown RBP15.82■□□□□ 0.12
CTHRC1-202ENST00000415886 C6orf222P0C671 652 aaPredicted RBP15.82■□□□□ 0.12
CTHRC1-202ENST00000415886 CST5P28325 142 aaPredicted RBP15.82■□□□□ 0.12
CTHRC1-202ENST00000415886 SLC4A3P48751 1232 aa15.82■□□□□ 0.12
CTHRC1-202ENST00000415886 TMEM240Q5SV17 173 aa15.82■□□□□ 0.12
CTHRC1-202ENST00000415886 MAMDC4Q6UXC1 1216 aa15.82■□□□□ 0.12
CTHRC1-202ENST00000415886 CCDC129Q6ZRS4 1044 aa15.82■□□□□ 0.12
CTHRC1-202ENST00000415886 DDRGK1Q96HY6 314 aa15.82■□□□□ 0.12
CTHRC1-202ENST00000415886 GLT1D1Q96MS3 346 aa15.82■□□□□ 0.12
CTHRC1-202ENST00000415886 HAUS7Q99871 368 aa15.82■□□□□ 0.12
CTHRC1-202ENST00000415886 PCDHB15Q9Y5E8 787 aa15.82■□□□□ 0.12
CTHRC1-202ENST00000415886 TNFRSF10AO00220 468 aa15.81■□□□□ 0.12
CTHRC1-202ENST00000415886 ELP1O95163 1332 aa15.81■□□□□ 0.12
CTHRC1-202ENST00000415886 ASGR1P07306 291 aa15.81■□□□□ 0.12
CTHRC1-202ENST00000415886 ACRP10323 421 aa15.81■□□□□ 0.12
CTHRC1-202ENST00000415886 CSF2RAP15509 400 aa15.81■□□□□ 0.12
CTHRC1-202ENST00000415886 CDK7P50613 346 aa15.81■□□□□ 0.12
CTHRC1-202ENST00000415886 PPIGQ13427 754 aaKnown RBP eCLIP15.81■□□□□ 0.12
CTHRC1-202ENST00000415886 ACVR2BQ13705 512 aa15.81■□□□□ 0.12
CTHRC1-202ENST00000415886 UBE3CQ15386 1083 aa15.81■□□□□ 0.12
CTHRC1-202ENST00000415886 MROH7Q68CQ1 1323 aa15.81■□□□□ 0.12
CTHRC1-202ENST00000415886 CPXCR1Q8N123 301 aa15.81■□□□□ 0.12
CTHRC1-202ENST00000415886 STK11IPQ8N1F8 1099 aa15.81■□□□□ 0.12
CTHRC1-202ENST00000415886 GAS2L1Q99501 681 aaPredicted RBP15.81■□□□□ 0.12
CTHRC1-202ENST00000415886 PPP1R12CQ9BZL4 782 aa15.81■□□□□ 0.12
CTHRC1-202ENST00000415886 PUS7LQ9H0K6 701 aaKnown RBP15.81■□□□□ 0.12
CTHRC1-202ENST00000415886 PRDM12Q9H4Q4 367 aa15.81■□□□□ 0.12
CTHRC1-202ENST00000415886 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.81■□□□□ 0.12
CTHRC1-202ENST00000415886 MYH7P12883 1935 aa15.8■□□□□ 0.12
CTHRC1-202ENST00000415886 NDUFB10O96000 172 aa15.8■□□□□ 0.12
CTHRC1-202ENST00000415886 RASA1P20936 1047 aa15.8■□□□□ 0.12
CTHRC1-202ENST00000415886 AAMPQ13685 434 aa15.8■□□□□ 0.12
CTHRC1-202ENST00000415886 RASIP1Q5U651 963 aa15.8■□□□□ 0.12
CTHRC1-202ENST00000415886 VTI1AQ96AJ9 217 aa15.8■□□□□ 0.12
CTHRC1-202ENST00000415886 FGD4Q96M96 766 aa15.8■□□□□ 0.12
CTHRC1-202ENST00000415886 RAVER2Q9HCJ3 691 aaKnown RBP15.8■□□□□ 0.12
CTHRC1-202ENST00000415886 ARPP21Q9UBL0 812 aaPredicted RBP15.8■□□□□ 0.12
CTHRC1-202ENST00000415886 A0A0U1RQG5 324 aaPredicted RBP15.79■□□□□ 0.12
CTHRC1-202ENST00000415886 F5H6K3 240 aa15.79■□□□□ 0.12
CTHRC1-202ENST00000415886 ARVCFO00192 962 aa15.79■□□□□ 0.12
CTHRC1-202ENST00000415886 COL9A1P20849 921 aa15.79■□□□□ 0.12
CTHRC1-202ENST00000415886 KLRC3Q07444 240 aa15.79■□□□□ 0.12
CTHRC1-202ENST00000415886 LRRFIP1Q32MZ4 808 aaKnown RBP15.79■□□□□ 0.12
CTHRC1-202ENST00000415886 CCDC144BQ3MJ40 725 aa15.79■□□□□ 0.12
CTHRC1-202ENST00000415886 ANKRD45Q5TZF3 282 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms