RNA–Protein interactions for RNA: ENST00000415669.3

SAPCD1-208, Transcript of suppressor APC domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SAPCD1, Length 916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAPCD1-208ENST00000415669 FGD1P98174 961 aa16.72■□□□□ 0.27
SAPCD1-208ENST00000415669 CAP1Q01518 475 aa16.72■□□□□ 0.27
SAPCD1-208ENST00000415669 ASPRV1Q53RT3 343 aa16.72■□□□□ 0.27
SAPCD1-208ENST00000415669 GPATCH4Q5T3I0 446 aaKnown RBP16.72■□□□□ 0.27
SAPCD1-208ENST00000415669 TTBK2Q6IQ55 1244 aa16.72■□□□□ 0.27
SAPCD1-208ENST00000415669 EFCC1Q9HA90 598 aa16.72■□□□□ 0.27
SAPCD1-208ENST00000415669 CWC22Q9HCG8 908 aaKnown RBP16.72■□□□□ 0.27
SAPCD1-208ENST00000415669 TRIM17Q9Y577 477 aa16.72■□□□□ 0.27
SAPCD1-208ENST00000415669 ZNFX1Q9P2E3 1918 aaKnown RBP16.72■□□□□ 0.27
SAPCD1-208ENST00000415669 PLXNA1Q9UIW2 1896 aa16.71■□□□□ 0.27
SAPCD1-208ENST00000415669 ZNF236Q9UL36 1845 aa16.71■□□□□ 0.27
SAPCD1-208ENST00000415669 TNPO2O14787 897 aaKnown RBP16.71■□□□□ 0.27
SAPCD1-208ENST00000415669 RPS6KB1P23443 525 aa16.71■□□□□ 0.27
SAPCD1-208ENST00000415669 EXOSC10Q01780 885 aaKnown RBP16.71■□□□□ 0.27
SAPCD1-208ENST00000415669 TMEM132BQ14DG7 1078 aa16.71■□□□□ 0.27
SAPCD1-208ENST00000415669 ARHGEF6Q15052 776 aa16.71■□□□□ 0.27
SAPCD1-208ENST00000415669 SYDE2Q5VT97 1194 aa16.71■□□□□ 0.27
SAPCD1-208ENST00000415669 WDR78Q5VTH9 848 aa16.71■□□□□ 0.27
SAPCD1-208ENST00000415669 CTU1Q7Z7A3 348 aaKnown RBP16.71■□□□□ 0.27
SAPCD1-208ENST00000415669 ZNF654Q8IZM8 581 aa16.71■□□□□ 0.27
SAPCD1-208ENST00000415669 NUP133Q8WUM0 1156 aa16.71■□□□□ 0.27
SAPCD1-208ENST00000415669 TRIM47Q96LD4 638 aa16.71■□□□□ 0.27
SAPCD1-208ENST00000415669 MYL10Q9BUA6 226 aa16.71■□□□□ 0.27
SAPCD1-208ENST00000415669 SPATC1LQ9H0A9 340 aa16.71■□□□□ 0.27
SAPCD1-208ENST00000415669 PORCNQ9H237 461 aa16.71■□□□□ 0.27
SAPCD1-208ENST00000415669 PRR12Q9ULL5 1215 aa16.71■□□□□ 0.27
SAPCD1-208ENST00000415669 ADAMTS5Q9UNA0 930 aa16.71■□□□□ 0.27
SAPCD1-208ENST00000415669 PLA2G6O60733 806 aa16.7■□□□□ 0.26
SAPCD1-208ENST00000415669 ZBED4O75132 1171 aa16.7■□□□□ 0.26
SAPCD1-208ENST00000415669 DDAH1O94760 285 aa16.7■□□□□ 0.26
SAPCD1-208ENST00000415669 LIFRP42702 1097 aa16.7■□□□□ 0.26
SAPCD1-208ENST00000415669 Q3C1V9 767 aa16.7■□□□□ 0.26
SAPCD1-208ENST00000415669 OTOP1Q7RTM1 612 aa16.7■□□□□ 0.26
SAPCD1-208ENST00000415669 TMTC2Q8N394 836 aa16.7■□□□□ 0.26
SAPCD1-208ENST00000415669 REPS2Q8NFH8 660 aa16.7■□□□□ 0.26
SAPCD1-208ENST00000415669 SMCHD1A6NHR9 2005 aa16.7■□□□□ 0.26
SAPCD1-208ENST00000415669 MAPK4P31152 587 aa16.69■□□□□ 0.26
SAPCD1-208ENST00000415669 ANAPC15P60006 121 aa16.69■□□□□ 0.26
SAPCD1-208ENST00000415669 SNAP25P60880 206 aa16.69■□□□□ 0.26
SAPCD1-208ENST00000415669 TROAPQ12815 778 aa16.69■□□□□ 0.26
SAPCD1-208ENST00000415669 GRM4Q14833 912 aa16.69■□□□□ 0.26
SAPCD1-208ENST00000415669 SNRNP48Q6IEG0 339 aaKnown RBP16.69■□□□□ 0.26
SAPCD1-208ENST00000415669 BTNL9Q6UXG8 535 aa16.69■□□□□ 0.26
SAPCD1-208ENST00000415669 Q6ZUG5 572 aa16.69■□□□□ 0.26
SAPCD1-208ENST00000415669 RUFY3Q7L099 469 aa16.69■□□□□ 0.26
SAPCD1-208ENST00000415669 RAB11FIP4Q86YS3 637 aa16.69■□□□□ 0.26
SAPCD1-208ENST00000415669 CPXCR1Q8N123 301 aa16.69■□□□□ 0.26
SAPCD1-208ENST00000415669 COA7Q96BR5 231 aa16.69■□□□□ 0.26
SAPCD1-208ENST00000415669 MOV10L1Q9BXT6 1211 aaKnown RBP16.69■□□□□ 0.26
SAPCD1-208ENST00000415669 UPF3BQ9BZI7 483 aaKnown RBP16.69■□□□□ 0.26
SAPCD1-208ENST00000415669 CPVLQ9H3G5 476 aa16.69■□□□□ 0.26
SAPCD1-208ENST00000415669 SLC38A10Q9HBR0 1119 aa16.69■□□□□ 0.26
SAPCD1-208ENST00000415669 ZNF214Q9UL59 606 aaPredicted RBP16.69■□□□□ 0.26
SAPCD1-208ENST00000415669 SLC12A7Q9Y666 1083 aa16.69■□□□□ 0.26
SAPCD1-208ENST00000415669 CYP46A1Q9Y6A2 500 aa16.69■□□□□ 0.26
SAPCD1-208ENST00000415669 BAZ2BQ9UIF8 2168 aaKnown RBP16.68■□□□□ 0.26
SAPCD1-208ENST00000415669 DHX16O60231 1041 aaKnown RBP16.68■□□□□ 0.26
SAPCD1-208ENST00000415669 GNRH1P01148 92 aa16.68■□□□□ 0.26
SAPCD1-208ENST00000415669 FDX1P10109 184 aa16.68■□□□□ 0.26
SAPCD1-208ENST00000415669 RXRAP19793 462 aa16.68■□□□□ 0.26
SAPCD1-208ENST00000415669 SLC4A3P48751 1232 aa16.68■□□□□ 0.26
SAPCD1-208ENST00000415669 COL13A1Q5TAT6 717 aaPredicted RBP16.68■□□□□ 0.26
SAPCD1-208ENST00000415669 CCDC174Q6PII3 467 aa16.68■□□□□ 0.26
SAPCD1-208ENST00000415669 SYNE3Q6ZMZ3 975 aa16.68■□□□□ 0.26
SAPCD1-208ENST00000415669 SGMS1Q86VZ5 419 aa16.68■□□□□ 0.26
SAPCD1-208ENST00000415669 MICU3Q86XE3 530 aa16.68■□□□□ 0.26
SAPCD1-208ENST00000415669 NCAPG2Q86XI2 1143 aa16.68■□□□□ 0.26
SAPCD1-208ENST00000415669 CCDC144CPQ8IYA2 1237 aa16.68■□□□□ 0.26
SAPCD1-208ENST00000415669 STAG2Q8N3U4 1231 aa16.68■□□□□ 0.26
SAPCD1-208ENST00000415669 CTCFLQ8NI51 663 aaPredicted RBP16.68■□□□□ 0.26
SAPCD1-208ENST00000415669 TEX13BQ9BXU2 312 aa16.68■□□□□ 0.26
SAPCD1-208ENST00000415669 TM6SF1Q9BZW5 370 aa16.68■□□□□ 0.26
SAPCD1-208ENST00000415669 UBA5Q9GZZ9 404 aa16.68■□□□□ 0.26
SAPCD1-208ENST00000415669 UPF2Q9HAU5 1272 aaKnown RBP16.68■□□□□ 0.26
SAPCD1-208ENST00000415669 RAVER2Q9HCJ3 691 aaKnown RBP16.68■□□□□ 0.26
SAPCD1-208ENST00000415669 ZSWIM6Q9HCJ5 1215 aa16.68■□□□□ 0.26
SAPCD1-208ENST00000415669 MAD2L2Q9UI95 211 aa16.68■□□□□ 0.26
SAPCD1-208ENST00000415669 NAP1L2Q9ULW6 460 aaPredicted RBP16.68■□□□□ 0.26
SAPCD1-208ENST00000415669 KLF18A0A0U1RQI7 1052 aa16.67■□□□□ 0.26
SAPCD1-208ENST00000415669 CALM1P0DP23 149 aa16.67■□□□□ 0.26
SAPCD1-208ENST00000415669 CALM2P0DP24 149 aa16.67■□□□□ 0.26
SAPCD1-208ENST00000415669 CALM3P0DP25 149 aa16.67■□□□□ 0.26
SAPCD1-208ENST00000415669 ERCC3P19447 782 aa16.67■□□□□ 0.26
SAPCD1-208ENST00000415669 HOXD10P28358 340 aa16.67■□□□□ 0.26
SAPCD1-208ENST00000415669 STAT3P40763 770 aa16.67■□□□□ 0.26
SAPCD1-208ENST00000415669 PRKCZQ05513 592 aa16.67■□□□□ 0.26
SAPCD1-208ENST00000415669 APOA5Q6Q788 366 aa16.67■□□□□ 0.26
SAPCD1-208ENST00000415669 GPR142Q7Z601 462 aa16.67■□□□□ 0.26
SAPCD1-208ENST00000415669 BRF1Q92994 677 aa16.67■□□□□ 0.26
SAPCD1-208ENST00000415669 RANBP17Q9H2T7 1088 aaKnown RBP16.67■□□□□ 0.26
SAPCD1-208ENST00000415669 IVNS1ABPQ9Y6Y0 642 aa16.67■□□□□ 0.26
SAPCD1-208ENST00000415669 PALM3A6NDB9 673 aaPredicted RBP16.66■□□□□ 0.26
SAPCD1-208ENST00000415669 KLRF2D3W0D1 207 aa16.66■□□□□ 0.26
SAPCD1-208ENST00000415669 SLC25A27O95847 323 aa16.66■□□□□ 0.26
SAPCD1-208ENST00000415669 KIF5BP33176 963 aa16.66■□□□□ 0.26
SAPCD1-208ENST00000415669 OAZ1P54368 228 aa16.66■□□□□ 0.26
SAPCD1-208ENST00000415669 PLEKHH3Q7Z736 793 aa16.66■□□□□ 0.26
SAPCD1-208ENST00000415669 RIOX2Q8IUF8 465 aa16.66■□□□□ 0.26
SAPCD1-208ENST00000415669 SHCBP1Q8NEM2 672 aa16.66■□□□□ 0.26
SAPCD1-208ENST00000415669 MROH8Q9H579 483 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms