RNA–Protein interactions for RNA: ENST00000415245.1

AC012506.3-201, humanhuman

TSL 3 BASIC

Gene AC012506.3, Length 892 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC012506.3-201ENST00000415245 TOX2Q96NM4 488 aa17.16■□□□□ 0.34
AC012506.3-201ENST00000415245 HAUS7Q99871 368 aa17.16■□□□□ 0.34
AC012506.3-201ENST00000415245 TSEN34Q9BSV6 310 aaKnown RBP17.16■□□□□ 0.34
AC012506.3-201ENST00000415245 GOPCQ9HD26 462 aa17.16■□□□□ 0.34
AC012506.3-201ENST00000415245 STARD7Q9NQZ5 370 aa17.16■□□□□ 0.34
AC012506.3-201ENST00000415245 CNPY2Q9Y2B0 182 aa17.16■□□□□ 0.34
AC012506.3-201ENST00000415245 MYH8P13535 1937 aa17.15■□□□□ 0.34
AC012506.3-201ENST00000415245 DNAJC25-GNG10A0A024R161 153 aa17.15■□□□□ 0.34
AC012506.3-201ENST00000415245 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.15■□□□□ 0.34
AC012506.3-201ENST00000415245 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.15■□□□□ 0.34
AC012506.3-201ENST00000415245 UBE3CQ15386 1083 aa17.15■□□□□ 0.34
AC012506.3-201ENST00000415245 SNRNP48Q6IEG0 339 aaKnown RBP17.15■□□□□ 0.34
AC012506.3-201ENST00000415245 C16orf59Q7L2K0 433 aa17.15■□□□□ 0.34
AC012506.3-201ENST00000415245 RPAP2Q8IXW5 612 aaPredicted RBP17.15■□□□□ 0.34
AC012506.3-201ENST00000415245 STK11IPQ8N1F8 1099 aa17.15■□□□□ 0.34
AC012506.3-201ENST00000415245 FGD4Q96M96 766 aa17.15■□□□□ 0.34
AC012506.3-201ENST00000415245 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.15■□□□□ 0.34
AC012506.3-201ENST00000415245 PRDM6Q9NQX0 595 aa17.15■□□□□ 0.34
AC012506.3-201ENST00000415245 TBX21Q9UL17 535 aa17.15■□□□□ 0.34
AC012506.3-201ENST00000415245 FAM184BQ9ULE4 1060 aa17.15■□□□□ 0.34
AC012506.3-201ENST00000415245 PLXNA1Q9UIW2 1896 aa17.15■□□□□ 0.34
AC012506.3-201ENST00000415245 TIMP1P01033 207 aa17.14■□□□□ 0.33
AC012506.3-201ENST00000415245 RASA1P20936 1047 aa17.14■□□□□ 0.33
AC012506.3-201ENST00000415245 MAMDC4Q6UXC1 1216 aa17.14■□□□□ 0.33
AC012506.3-201ENST00000415245 AMOTL1Q8IY63 956 aa17.14■□□□□ 0.33
AC012506.3-201ENST00000415245 SLF1Q9BQI6 1058 aa17.14■□□□□ 0.33
AC012506.3-201ENST00000415245 TEX13BQ9BXU2 312 aa17.14■□□□□ 0.33
AC012506.3-201ENST00000415245 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.14■□□□□ 0.33
AC012506.3-201ENST00000415245 ZNF576Q9H609 170 aa17.14■□□□□ 0.33
AC012506.3-201ENST00000415245 ZBTB40Q9NUA8 1239 aa17.14■□□□□ 0.33
AC012506.3-201ENST00000415245 ZHX1Q9UKY1 873 aaPredicted RBP17.14■□□□□ 0.33
AC012506.3-201ENST00000415245 SYNGAP1Q96PV0 1343 aa17.14■□□□□ 0.33
AC012506.3-201ENST00000415245 MOXD2PA6NHM9 499 aa17.13■□□□□ 0.33
AC012506.3-201ENST00000415245 GRXCR1A8MXD5 290 aa17.13■□□□□ 0.33
AC012506.3-201ENST00000415245 DCDC2CA8MYV0 355 aa17.13■□□□□ 0.33
AC012506.3-201ENST00000415245 F5H6K3 240 aa17.13■□□□□ 0.33
AC012506.3-201ENST00000415245 RAB11FIP3O75154 756 aa17.13■□□□□ 0.33
AC012506.3-201ENST00000415245 NDUFB10O96000 172 aa17.13■□□□□ 0.33
AC012506.3-201ENST00000415245 COPB2P35606 906 aa17.13■□□□□ 0.33
AC012506.3-201ENST00000415245 PBX2P40425 430 aa17.13■□□□□ 0.33
AC012506.3-201ENST00000415245 SLC4A3P48751 1232 aa17.13■□□□□ 0.33
AC012506.3-201ENST00000415245 CDK7P50613 346 aa17.13■□□□□ 0.33
AC012506.3-201ENST00000415245 KLRC3Q07444 240 aa17.13■□□□□ 0.33
AC012506.3-201ENST00000415245 MSL3Q8N5Y2 521 aaKnown RBP17.13■□□□□ 0.33
AC012506.3-201ENST00000415245 NUP133Q8WUM0 1156 aa17.13■□□□□ 0.33
AC012506.3-201ENST00000415245 MUC3AQ02505 3323 aa17.12■□□□□ 0.33
AC012506.3-201ENST00000415245 DUSP11O75319 330 aaKnown RBP17.12■□□□□ 0.33
AC012506.3-201ENST00000415245 TMEM240Q5SV17 173 aa17.12■□□□□ 0.33
AC012506.3-201ENST00000415245 CPXCR1Q8N123 301 aa17.12■□□□□ 0.33
AC012506.3-201ENST00000415245 TIFAQ96CG3 184 aa17.12■□□□□ 0.33
AC012506.3-201ENST00000415245 DDX11Q96FC9 970 aa17.12■□□□□ 0.33
AC012506.3-201ENST00000415245 DDRGK1Q96HY6 314 aa17.12■□□□□ 0.33
AC012506.3-201ENST00000415245 STRBPQ96SI9 672 aaKnown RBP17.12■□□□□ 0.33
AC012506.3-201ENST00000415245 RAVER2Q9HCJ3 691 aaKnown RBP17.12■□□□□ 0.33
AC012506.3-201ENST00000415245 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.12■□□□□ 0.33
AC012506.3-201ENST00000415245 NYAP2Q9P242 653 aa17.12■□□□□ 0.33
AC012506.3-201ENST00000415245 COG6Q9Y2V7 657 aa17.12■□□□□ 0.33
AC012506.3-201ENST00000415245 GREB1LQ9C091 1923 aaPredicted RBP17.11■□□□□ 0.33
AC012506.3-201ENST00000415245 GSG1L2A8MUP6 293 aa17.11■□□□□ 0.33
AC012506.3-201ENST00000415245 HMMRO75330 724 aa17.11■□□□□ 0.33
AC012506.3-201ENST00000415245 ASGR1P07306 291 aa17.11■□□□□ 0.33
AC012506.3-201ENST00000415245 CST5P28325 142 aaPredicted RBP17.11■□□□□ 0.33
AC012506.3-201ENST00000415245 ACVR2BQ13705 512 aa17.11■□□□□ 0.33
AC012506.3-201ENST00000415245 SBK1Q52WX2 424 aa17.11■□□□□ 0.33
AC012506.3-201ENST00000415245 RASIP1Q5U651 963 aa17.11■□□□□ 0.33
AC012506.3-201ENST00000415245 MFSD5Q6N075 450 aa17.11■□□□□ 0.33
AC012506.3-201ENST00000415245 ARPP21Q9UBL0 812 aaPredicted RBP17.11■□□□□ 0.33
AC012506.3-201ENST00000415245 IGKV6D-41A0A0C4DH26 115 aa17.1■□□□□ 0.33
AC012506.3-201ENST00000415245 ATP2A1O14983 1001 aa17.1■□□□□ 0.33
AC012506.3-201ENST00000415245 CTAGE5O15320 804 aa17.1■□□□□ 0.33
AC012506.3-201ENST00000415245 SMARCA5O60264 1052 aaPredicted RBP17.1■□□□□ 0.33
AC012506.3-201ENST00000415245 C6orf222P0C671 652 aaPredicted RBP17.1■□□□□ 0.33
AC012506.3-201ENST00000415245 ACRP10323 421 aa17.1■□□□□ 0.33
AC012506.3-201ENST00000415245 CSF2RAP15509 400 aa17.1■□□□□ 0.33
AC012506.3-201ENST00000415245 CCDC144BQ3MJ40 725 aa17.1■□□□□ 0.33
AC012506.3-201ENST00000415245 ZNF467Q7Z7K2 595 aaPredicted RBP17.1■□□□□ 0.33
AC012506.3-201ENST00000415245 PRPF38AQ8NAV1 312 aaKnown RBP17.1■□□□□ 0.33
AC012506.3-201ENST00000415245 SYMPKQ92797 1274 aaKnown RBP17.1■□□□□ 0.33
AC012506.3-201ENST00000415245 GLT1D1Q96MS3 346 aa17.1■□□□□ 0.33
AC012506.3-201ENST00000415245 PBX4Q9BYU1 374 aa17.1■□□□□ 0.33
AC012506.3-201ENST00000415245 UPF3AQ9H1J1 476 aaKnown RBP17.1■□□□□ 0.33
AC012506.3-201ENST00000415245 CLIP2Q9UDT6 1046 aa17.1■□□□□ 0.33
AC012506.3-201ENST00000415245 ELP1O95163 1332 aa17.1■□□□□ 0.33
AC012506.3-201ENST00000415245 GJA9P57773 515 aa17.09■□□□□ 0.33
AC012506.3-201ENST00000415245 TJAP1Q5JTD0 557 aa17.09■□□□□ 0.33
AC012506.3-201ENST00000415245 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.09■□□□□ 0.33
AC012506.3-201ENST00000415245 FAM126BQ8IXS8 530 aa17.09■□□□□ 0.33
AC012506.3-201ENST00000415245 OSBP2Q969R2 916 aa17.09■□□□□ 0.33
AC012506.3-201ENST00000415245 KIFC2Q96AC6 838 aa17.09■□□□□ 0.33
AC012506.3-201ENST00000415245 PPP1R12CQ9BZL4 782 aa17.09■□□□□ 0.33
AC012506.3-201ENST00000415245 KATNBL1Q9H079 304 aa17.09■□□□□ 0.33
AC012506.3-201ENST00000415245 SLC38A10Q9HBR0 1119 aa17.09■□□□□ 0.33
AC012506.3-201ENST00000415245 MINDY4BA8MYZ0 360 aa17.08■□□□□ 0.32
AC012506.3-201ENST00000415245 ARVCFO00192 962 aa17.08■□□□□ 0.32
AC012506.3-201ENST00000415245 ZBED4O75132 1171 aa17.08■□□□□ 0.32
AC012506.3-201ENST00000415245 PTGS1P23219 599 aa17.08■□□□□ 0.32
AC012506.3-201ENST00000415245 PPIGQ13427 754 aaKnown RBP eCLIP17.08■□□□□ 0.32
AC012506.3-201ENST00000415245 ZNF365Q70YC5 407 aa17.08■□□□□ 0.32
AC012506.3-201ENST00000415245 ARMCX2Q7L311 632 aa17.08■□□□□ 0.32
AC012506.3-201ENST00000415245 PPM1EQ8WY54 764 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms