RNA–Protein interactions for RNA: ENST00000415030.6

SCN4B-202, Transcript of sodium voltage-gated channel beta subunit 4, humanhuman

TSL 1 (best)

Gene SCN4B, Length 4,480 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4B-202ENST00000415030 GUCY2CP25092 1073 aa12.93□□□□□ -0.34
SCN4B-202ENST00000415030 PTGDRQ13258 359 aa12.93□□□□□ -0.34
SCN4B-202ENST00000415030 CCDC114Q96M63 670 aa12.93□□□□□ -0.34
SCN4B-202ENST00000415030 NOX5Q96PH1 765 aa12.93□□□□□ -0.34
SCN4B-202ENST00000415030 RAB34Q9BZG1 259 aa12.93□□□□□ -0.34
SCN4B-202ENST00000415030 TMOD2Q9NZR1 351 aa12.93□□□□□ -0.34
SCN4B-202ENST00000415030 TCEAL9Q9UHQ7 104 aa12.93□□□□□ -0.34
SCN4B-202ENST00000415030 FAM169AQ9Y6X4 670 aa12.93□□□□□ -0.34
SCN4B-202ENST00000415030 ACTN4O43707 911 aaKnown RBP12.92□□□□□ -0.34
SCN4B-202ENST00000415030 LONP1P36776 959 aaKnown RBP12.92□□□□□ -0.34
SCN4B-202ENST00000415030 GGCXP38435 758 aa12.92□□□□□ -0.34
SCN4B-202ENST00000415030 LRRC31Q6UY01 552 aa12.92□□□□□ -0.34
SCN4B-202ENST00000415030 CCDC155Q8N6L0 562 aa12.92□□□□□ -0.34
SCN4B-202ENST00000415030 PLEKHA4Q9H4M7 779 aa12.92□□□□□ -0.34
SCN4B-202ENST00000415030 MAGEB6P1A0A0J9YX57 407 aa12.92□□□□□ -0.34
SCN4B-202ENST00000415030 PSMD14O00487 310 aa12.92□□□□□ -0.34
SCN4B-202ENST00000415030 FXR1P51114 621 aaKnown RBP eCLIP12.92□□□□□ -0.34
SCN4B-202ENST00000415030 CAVIN4Q5BKX8 364 aa12.92□□□□□ -0.34
SCN4B-202ENST00000415030 CCDC84Q86UT8 332 aaPredicted RBP12.92□□□□□ -0.34
SCN4B-202ENST00000415030 ZBTB38Q8NAP3 1195 aaPredicted RBP12.92□□□□□ -0.34
SCN4B-202ENST00000415030 NCAPGQ9BPX3 1015 aa12.92□□□□□ -0.34
SCN4B-202ENST00000415030 UBXN6Q9BZV1 441 aa12.92□□□□□ -0.34
SCN4B-202ENST00000415030 GYPCP04921 128 aa12.92□□□□□ -0.34
SCN4B-202ENST00000415030 MYL1P05976 194 aa12.92□□□□□ -0.34
SCN4B-202ENST00000415030 MAGEA1P43355 309 aa12.92□□□□□ -0.34
SCN4B-202ENST00000415030 SARSP49591 514 aaKnown RBP12.92□□□□□ -0.34
SCN4B-202ENST00000415030 FOXP4Q8IVH2 680 aaPredicted RBP12.92□□□□□ -0.34
SCN4B-202ENST00000415030 MB21D1Q8N884 522 aa12.92□□□□□ -0.34
SCN4B-202ENST00000415030 IFT81Q8WYA0 676 aa12.92□□□□□ -0.34
SCN4B-202ENST00000415030 CABS1Q96KC9 395 aa12.92□□□□□ -0.34
SCN4B-202ENST00000415030 THAP9Q9H5L6 903 aa12.92□□□□□ -0.34
SCN4B-202ENST00000415030 INTS13Q9NVM9 706 aa12.92□□□□□ -0.34
SCN4B-202ENST00000415030 HPCAL4Q9UM19 191 aa12.92□□□□□ -0.34
SCN4B-202ENST00000415030 ZBED6P86452 979 aa12.92□□□□□ -0.34
SCN4B-202ENST00000415030 STRBPQ96SI9 672 aaKnown RBP12.92□□□□□ -0.34
SCN4B-202ENST00000415030 SUGCTQ9HAC7 445 aa12.92□□□□□ -0.34
SCN4B-202ENST00000415030 HEG1Q9ULI3 1381 aa12.91□□□□□ -0.34
SCN4B-202ENST00000415030 A0A1W2PQC6 194 aa12.91□□□□□ -0.34
SCN4B-202ENST00000415030 RXRBP28702 533 aa12.91□□□□□ -0.34
SCN4B-202ENST00000415030 PI16Q6UXB8 463 aa12.91□□□□□ -0.34
SCN4B-202ENST00000415030 NOA1Q8NC60 698 aaKnown RBP12.91□□□□□ -0.34
SCN4B-202ENST00000415030 IGDCC4Q8TDY8 1250 aa12.91□□□□□ -0.34
SCN4B-202ENST00000415030 KAT14Q9H8E8 782 aa12.91□□□□□ -0.34
SCN4B-202ENST00000415030 MROH5Q6ZUA9 1318 aa12.91□□□□□ -0.34
SCN4B-202ENST00000415030 ERVV-2B6SEH9 535 aa12.91□□□□□ -0.34
SCN4B-202ENST00000415030 DNA2P51530 1060 aa12.91□□□□□ -0.34
SCN4B-202ENST00000415030 PPARAQ07869 468 aa12.91□□□□□ -0.34
SCN4B-202ENST00000415030 CMTR1Q8N1G2 835 aaKnown RBP12.91□□□□□ -0.34
SCN4B-202ENST00000415030 RABEP2Q9H5N1 569 aa12.91□□□□□ -0.34
SCN4B-202ENST00000415030 NEDD4P46934 1319 aa12.91□□□□□ -0.34
SCN4B-202ENST00000415030 FMN2Q9NZ56 1722 aa12.91□□□□□ -0.34
SCN4B-202ENST00000415030 LGALS16A8MUM7 142 aa12.91□□□□□ -0.34
SCN4B-202ENST00000415030 ZMYND10O75800 440 aa12.91□□□□□ -0.34
SCN4B-202ENST00000415030 IFFO1Q0D2I5 559 aa12.91□□□□□ -0.34
SCN4B-202ENST00000415030 TMEM266Q2M3C6 531 aa12.91□□□□□ -0.34
SCN4B-202ENST00000415030 FAM182BQ5T319 152 aa12.91□□□□□ -0.34
SCN4B-202ENST00000415030 CNNM4Q6P4Q7 775 aa12.91□□□□□ -0.34
SCN4B-202ENST00000415030 DZIP3Q86Y13 1208 aaKnown RBP12.91□□□□□ -0.34
SCN4B-202ENST00000415030 MIGA1Q8NAN2 632 aa12.91□□□□□ -0.34
SCN4B-202ENST00000415030 NLRP3Q96P20 1036 aa12.91□□□□□ -0.34
SCN4B-202ENST00000415030 BCCIPQ9P287 314 aaKnown RBP eCLIP12.91□□□□□ -0.34
SCN4B-202ENST00000415030 RNF14Q9UBS8 474 aa12.91□□□□□ -0.34
SCN4B-202ENST00000415030 LCMT1Q9UIC8 334 aa12.91□□□□□ -0.34
SCN4B-202ENST00000415030 TNKSO95271 1327 aa12.9□□□□□ -0.34
SCN4B-202ENST00000415030 TSPY2A6NKD2 308 aa12.9□□□□□ -0.34
SCN4B-202ENST00000415030 ANKRD65E5RJM6 399 aa12.9□□□□□ -0.34
SCN4B-202ENST00000415030 PDE4DQ08499 809 aa12.9□□□□□ -0.34
SCN4B-202ENST00000415030 PAXIP1Q6ZW49 1069 aaPredicted RBP12.9□□□□□ -0.34
SCN4B-202ENST00000415030 LRRC37A3O60309 1634 aa12.9□□□□□ -0.34
SCN4B-202ENST00000415030 PDE8AO60658 829 aa12.9□□□□□ -0.34
SCN4B-202ENST00000415030 PDE8BO95263 885 aa12.9□□□□□ -0.34
SCN4B-202ENST00000415030 MCAMP43121 646 aa12.9□□□□□ -0.34
SCN4B-202ENST00000415030 RUFY4Q6ZNE9 571 aa12.9□□□□□ -0.34
SCN4B-202ENST00000415030 VPS36Q86VN1 386 aa12.9□□□□□ -0.34
SCN4B-202ENST00000415030 LRRC45Q96CN5 670 aa12.9□□□□□ -0.34
SCN4B-202ENST00000415030 PRPF3O43395 683 aaKnown RBP12.9□□□□□ -0.34
SCN4B-202ENST00000415030 SEMA3FQ13275 785 aa12.9□□□□□ -0.34
SCN4B-202ENST00000415030 CCDC40Q4G0X9 1142 aa12.9□□□□□ -0.34
SCN4B-202ENST00000415030 DHTKD1Q96HY7 919 aaPredicted RBP12.9□□□□□ -0.34
SCN4B-202ENST00000415030 TUBGCP2Q9BSJ2 902 aa12.9□□□□□ -0.34
SCN4B-202ENST00000415030 CCDC172P0C7W6 258 aa12.9□□□□□ -0.35
SCN4B-202ENST00000415030 TRAPPC3LQ5T215 181 aa12.9□□□□□ -0.35
SCN4B-202ENST00000415030 ZNF772Q68DY9 489 aaPredicted RBP12.9□□□□□ -0.35
SCN4B-202ENST00000415030 CEP89Q96ST8 783 aa12.9□□□□□ -0.35
SCN4B-202ENST00000415030 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.9□□□□□ -0.35
SCN4B-202ENST00000415030 GEMIN8Q9NWZ8 242 aaKnown RBP12.9□□□□□ -0.35
SCN4B-202ENST00000415030 AARSP49588 968 aaKnown RBP eCLIP12.89□□□□□ -0.35
SCN4B-202ENST00000415030 DPYDQ12882 1025 aa12.89□□□□□ -0.35
SCN4B-202ENST00000415030 CDKAL1Q5VV42 579 aa12.89□□□□□ -0.35
SCN4B-202ENST00000415030 STAG1Q8WVM7 1258 aa12.89□□□□□ -0.35
SCN4B-202ENST00000415030 HSD3B7Q9H2F3 369 aa12.89□□□□□ -0.35
SCN4B-202ENST00000415030 MAGEF1Q9HAY2 307 aa12.89□□□□□ -0.35
SCN4B-202ENST00000415030 LRRIQ3A6PVS8 624 aaPredicted RBP12.89□□□□□ -0.35
SCN4B-202ENST00000415030 PCP11498 1178 aaKnown RBP12.89□□□□□ -0.35
SCN4B-202ENST00000415030 MDM2Q00987 491 aaPredicted RBP12.89□□□□□ -0.35
SCN4B-202ENST00000415030 C2orf54Q08AI8 447 aa12.89□□□□□ -0.35
SCN4B-202ENST00000415030 TPTE2Q6XPS3 522 aa12.89□□□□□ -0.35
SCN4B-202ENST00000415030 CCNI2Q6ZMN8 369 aaPredicted RBP12.89□□□□□ -0.35
SCN4B-202ENST00000415030 TRAPPC11Q7Z392 1133 aa12.89□□□□□ -0.35
SCN4B-202ENST00000415030 CERKQ8TCT0 537 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms