RNA–Protein interactions for RNA: ENST00000414786.6

SHANK3-202, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

TSL 5

Gene SHANK3, Length 7,394 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-202ENST00000414786 POLA1P09884 1462 aaPredicted RBP20.29■□□□□ 0.84
SHANK3-202ENST00000414786 CYP4A11Q02928 519 aa20.28■□□□□ 0.84
SHANK3-202ENST00000414786 MUM1Q2TAK8 710 aa20.28■□□□□ 0.84
SHANK3-202ENST00000414786 PPFIA2O75334 1257 aa20.28■□□□□ 0.84
SHANK3-202ENST00000414786 APOEP02649 317 aa20.28■□□□□ 0.84
SHANK3-202ENST00000414786 SNX1Q13596 522 aa20.28■□□□□ 0.84
SHANK3-202ENST00000414786 NLRP7Q8WX94 980 aa20.28■□□□□ 0.84
SHANK3-202ENST00000414786 SDCCAG3Q96C92 435 aa20.28■□□□□ 0.84
SHANK3-202ENST00000414786 CPSF2Q9P2I0 782 aaKnown RBP20.28■□□□□ 0.84
SHANK3-202ENST00000414786 NSUN2Q08J23 767 aaKnown RBP eCLIP20.28■□□□□ 0.84
SHANK3-202ENST00000414786 GNPTABQ3T906 1256 aa20.28■□□□□ 0.84
SHANK3-202ENST00000414786 ARFGAP2Q8N6H7 521 aa20.28■□□□□ 0.84
SHANK3-202ENST00000414786 KCNH3Q9ULD8 1083 aa20.28■□□□□ 0.84
SHANK3-202ENST00000414786 EPHB1P54762 984 aa20.28■□□□□ 0.84
SHANK3-202ENST00000414786 RNF10Q8N5U6 811 aaKnown RBP20.28■□□□□ 0.84
SHANK3-202ENST00000414786 TOP2AP11388 1531 aaKnown RBP20.28■□□□□ 0.84
SHANK3-202ENST00000414786 PRPSAP1Q14558 356 aa20.28■□□□□ 0.84
SHANK3-202ENST00000414786 IFT20Q8IY31 132 aa20.28■□□□□ 0.84
SHANK3-202ENST00000414786 PDCD6IPQ8WUM4 868 aaKnown RBP20.28■□□□□ 0.84
SHANK3-202ENST00000414786 CARD6Q9BX69 1037 aa20.28■□□□□ 0.84
SHANK3-202ENST00000414786 KIF11P52732 1056 aa20.28■□□□□ 0.84
SHANK3-202ENST00000414786 KRT27Q7Z3Y8 459 aa20.28■□□□□ 0.84
SHANK3-202ENST00000414786 F5H423 210 aaPredicted RBP20.27■□□□□ 0.84
SHANK3-202ENST00000414786 ATP8B2P98198 1209 aa20.27■□□□□ 0.84
SHANK3-202ENST00000414786 HPS4Q9NQG7 708 aa20.27■□□□□ 0.84
SHANK3-202ENST00000414786 PNMA2Q9UL42 364 aa20.27■□□□□ 0.84
SHANK3-202ENST00000414786 GPAA1O43292 621 aa20.27■□□□□ 0.84
SHANK3-202ENST00000414786 ZNF449Q6P9G9 518 aa20.27■□□□□ 0.84
SHANK3-202ENST00000414786 CCDC94Q9BW85 323 aaPredicted RBP20.27■□□□□ 0.84
SHANK3-202ENST00000414786 SMCO2A6NFE2 343 aa20.27■□□□□ 0.84
SHANK3-202ENST00000414786 SMAD1Q15797 465 aaKnown RBP20.27■□□□□ 0.84
SHANK3-202ENST00000414786 MYL5Q02045 173 aa20.27■□□□□ 0.84
SHANK3-202ENST00000414786 MFSD14BQ5SR56 506 aa20.27■□□□□ 0.84
SHANK3-202ENST00000414786 PI4K2BQ8TCG2 481 aa20.27■□□□□ 0.84
SHANK3-202ENST00000414786 NONOQ15233 471 aaKnown RBP eCLIP20.27■□□□□ 0.83
SHANK3-202ENST00000414786 RPS6KA1Q15418 735 aa20.27■□□□□ 0.83
SHANK3-202ENST00000414786 SGK1O00141 431 aa20.27■□□□□ 0.83
SHANK3-202ENST00000414786 DEXIO95424 95 aa20.27■□□□□ 0.83
SHANK3-202ENST00000414786 ESRRBO95718 433 aa20.27■□□□□ 0.83
SHANK3-202ENST00000414786 MAGEA1P43355 309 aa20.27■□□□□ 0.83
SHANK3-202ENST00000414786 NOS1P29475 1434 aa20.26■□□□□ 0.83
SHANK3-202ENST00000414786 KCNK3O14649 394 aa20.26■□□□□ 0.83
SHANK3-202ENST00000414786 HOOK2Q96ED9 719 aa20.26■□□□□ 0.83
SHANK3-202ENST00000414786 CCDC141Q6ZP82 1450 aa20.26■□□□□ 0.83
SHANK3-202ENST00000414786 MTX1Q13505 466 aa20.26■□□□□ 0.83
SHANK3-202ENST00000414786 POLR3EQ9NVU0 708 aa20.26■□□□□ 0.83
SHANK3-202ENST00000414786 ACTN1P12814 892 aa20.26■□□□□ 0.83
SHANK3-202ENST00000414786 YWHAGP61981 247 aaKnown RBP eCLIP20.26■□□□□ 0.83
SHANK3-202ENST00000414786 KRT71Q3SY84 523 aa20.26■□□□□ 0.83
SHANK3-202ENST00000414786 BMP2KLQ5H9B9 411 aa20.26■□□□□ 0.83
SHANK3-202ENST00000414786 TRMT10CQ7L0Y3 403 aaKnown RBP20.26■□□□□ 0.83
SHANK3-202ENST00000414786 GPKOWQ92917 476 aaPredicted RBP eCLIP20.26■□□□□ 0.83
SHANK3-202ENST00000414786 PCDHB4Q9Y5E5 795 aa20.26■□□□□ 0.83
SHANK3-202ENST00000414786 GOLGA8CPA6NN73 597 aa20.25■□□□□ 0.83
SHANK3-202ENST00000414786 ZSCAN20P17040 1043 aaPredicted RBP20.25■□□□□ 0.83
SHANK3-202ENST00000414786 GOLGA8FQ08AF8 430 aa20.25■□□□□ 0.83
SHANK3-202ENST00000414786 GOLGA8DPQ0D2H9 430 aa20.25■□□□□ 0.83
SHANK3-202ENST00000414786 PRIMPOLQ96LW4 560 aa20.25■□□□□ 0.83
SHANK3-202ENST00000414786 ABCC5O15440 1437 aa20.25■□□□□ 0.83
SHANK3-202ENST00000414786 TROQ12816 1431 aaPredicted RBP20.25■□□□□ 0.83
SHANK3-202ENST00000414786 ZCWPW1Q9H0M4 648 aa20.25■□□□□ 0.83
SHANK3-202ENST00000414786 CCPG1Q9ULG6 757 aa20.25■□□□□ 0.83
SHANK3-202ENST00000414786 FAM135AQ9P2D6 1515 aa20.25■□□□□ 0.83
SHANK3-202ENST00000414786 ELF1P32519 619 aa20.25■□□□□ 0.83
SHANK3-202ENST00000414786 IPO11Q9UI26 975 aaKnown RBP20.25■□□□□ 0.83
SHANK3-202ENST00000414786 FAM95CA0A1B0GW59 222 aa20.25■□□□□ 0.83
SHANK3-202ENST00000414786 PFDN6O15212 129 aa20.25■□□□□ 0.83
SHANK3-202ENST00000414786 MYL3P08590 195 aa20.25■□□□□ 0.83
SHANK3-202ENST00000414786 ATP1A2P50993 1020 aa20.25■□□□□ 0.83
SHANK3-202ENST00000414786 PNOCQ13519 176 aa20.25■□□□□ 0.83
SHANK3-202ENST00000414786 EIF4A2Q14240 407 aaKnown RBP20.25■□□□□ 0.83
SHANK3-202ENST00000414786 SDR42E1Q8WUS8 393 aa20.25■□□□□ 0.83
SHANK3-202ENST00000414786 GCNAQ96QF7 691 aa20.25■□□□□ 0.83
SHANK3-202ENST00000414786 KCNQ4P56696 695 aa20.25■□□□□ 0.83
SHANK3-202ENST00000414786 SUPT20HQ8NEM7 779 aa20.25■□□□□ 0.83
SHANK3-202ENST00000414786 FAM227BQ96M60 508 aa20.25■□□□□ 0.83
SHANK3-202ENST00000414786 TSNAXIP1Q2TAA8 658 aa20.24■□□□□ 0.83
SHANK3-202ENST00000414786 SLC13A4Q9UKG4 626 aa20.24■□□□□ 0.83
SHANK3-202ENST00000414786 METTL23Q86XA0 190 aa20.24■□□□□ 0.83
SHANK3-202ENST00000414786 PPWD1Q96BP3 646 aaKnown RBP20.24■□□□□ 0.83
SHANK3-202ENST00000414786 IFT122Q9HBG6 1241 aa20.24■□□□□ 0.83
SHANK3-202ENST00000414786 IGF1RP08069 1367 aa20.24■□□□□ 0.83
SHANK3-202ENST00000414786 GOLGA8SH3BPF8 625 aa20.24■□□□□ 0.83
SHANK3-202ENST00000414786 INO80B-WBP1J3KQ70 363 aa20.24■□□□□ 0.83
SHANK3-202ENST00000414786 VCPP55072 806 aaKnown RBP20.24■□□□□ 0.83
SHANK3-202ENST00000414786 HADHQ16836 314 aaKnown RBP20.24■□□□□ 0.83
SHANK3-202ENST00000414786 SCARA5Q6ZMJ2 495 aa20.24■□□□□ 0.83
SHANK3-202ENST00000414786 INO80BQ9C086 356 aaPredicted RBP20.24■□□□□ 0.83
SHANK3-202ENST00000414786 SLC38A10Q9HBR0 1119 aa20.24■□□□□ 0.83
SHANK3-202ENST00000414786 SNX25Q9H3E2 840 aa20.24■□□□□ 0.83
SHANK3-202ENST00000414786 ADKP55263 362 aaKnown RBP20.24■□□□□ 0.83
SHANK3-202ENST00000414786 CEP128Q6ZU80 1094 aa20.24■□□□□ 0.83
SHANK3-202ENST00000414786 DBNDD2Q9BQY9 259 aa20.24■□□□□ 0.83
SHANK3-202ENST00000414786 TSPYL6Q8N831 410 aa20.24■□□□□ 0.83
SHANK3-202ENST00000414786 CFAP61Q8NHU2 1237 aa20.24■□□□□ 0.83
SHANK3-202ENST00000414786 COG4Q9H9E3 785 aa20.24■□□□□ 0.83
SHANK3-202ENST00000414786 SCHIP1Q9P0W5 487 aaPredicted RBP20.24■□□□□ 0.83
SHANK3-202ENST00000414786 ARHGEF11O15085 1522 aa20.24■□□□□ 0.83
SHANK3-202ENST00000414786 ZNF532Q9HCE3 1301 aa20.23■□□□□ 0.83
SHANK3-202ENST00000414786 SNAP25P60880 206 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms