RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 TAF1DQ9H5J8 278 aaPredicted RBP6.05□□□□□ -1.44
VPS41-205ENST00000414632 TMEM63CQ9P1W3 806 aa6.05□□□□□ -1.44
VPS41-205ENST00000414632 GGT7Q9UJ14 662 aa6.05□□□□□ -1.44
VPS41-205ENST00000414632 MYO5AQ9Y4I1 1855 aaKnown RBP6.05□□□□□ -1.44
VPS41-205ENST00000414632 IRS2Q9Y4H2 1338 aa6.04□□□□□ -1.44
VPS41-205ENST00000414632 PNMA6EA0A0J9YXQ4 647 aa6.04□□□□□ -1.44
VPS41-205ENST00000414632 IQCA1LA6NCM1 817 aa6.04□□□□□ -1.44
VPS41-205ENST00000414632 SRGAP3O43295 1099 aa6.04□□□□□ -1.44
VPS41-205ENST00000414632 XYLBO75191 536 aa6.04□□□□□ -1.44
VPS41-205ENST00000414632 EGFRP00533 1210 aa6.04□□□□□ -1.44
VPS41-205ENST00000414632 GNAI2P04899 355 aa6.04□□□□□ -1.44
VPS41-205ENST00000414632 GNAI3P08754 354 aa6.04□□□□□ -1.44
VPS41-205ENST00000414632 GRNP28799 593 aaKnown RBP6.04□□□□□ -1.44
VPS41-205ENST00000414632 GYG1P46976 350 aa6.04□□□□□ -1.44
VPS41-205ENST00000414632 RACK1P63244 317 aaKnown RBP6.04□□□□□ -1.44
VPS41-205ENST00000414632 PRR20EP86478 221 aa6.04□□□□□ -1.44
VPS41-205ENST00000414632 PRR20CP86479 221 aa6.04□□□□□ -1.44
VPS41-205ENST00000414632 PRR20DP86480 221 aa6.04□□□□□ -1.44
VPS41-205ENST00000414632 PRR20BP86481 221 aa6.04□□□□□ -1.44
VPS41-205ENST00000414632 PRR20AP86496 221 aa6.04□□□□□ -1.44
VPS41-205ENST00000414632 TNIP1Q15025 636 aa6.04□□□□□ -1.44
VPS41-205ENST00000414632 TAF1CQ15572 869 aaPredicted RBP6.04□□□□□ -1.44
VPS41-205ENST00000414632 TBC1D10BQ4KMP7 808 aaPredicted RBP6.04□□□□□ -1.44
VPS41-205ENST00000414632 MEI1Q5TIA1 1274 aa6.04□□□□□ -1.44
VPS41-205ENST00000414632 MAP1SQ66K74 1059 aaPredicted RBP6.04□□□□□ -1.44
VPS41-205ENST00000414632 TRPM4Q8TD43 1214 aa6.04□□□□□ -1.44
VPS41-205ENST00000414632 CEP63Q96MT8 703 aa6.04□□□□□ -1.44
VPS41-205ENST00000414632 GPRC5DQ9NZD1 345 aa6.04□□□□□ -1.44
VPS41-205ENST00000414632 CNTN3Q9P232 1028 aa6.04□□□□□ -1.44
VPS41-205ENST00000414632 CNOT7Q9UIV1 285 aaKnown RBP6.04□□□□□ -1.44
VPS41-205ENST00000414632 LEMD3Q9Y2U8 911 aa6.04□□□□□ -1.44
VPS41-205ENST00000414632 RIPOR2Q9Y4F9 1068 aa6.04□□□□□ -1.44
VPS41-205ENST00000414632 PCDHGB7Q9Y5F8 929 aa6.04□□□□□ -1.44
VPS41-205ENST00000414632 MROH5Q6ZUA9 1318 aa6.03□□□□□ -1.44
VPS41-205ENST00000414632 F8W031 263 aaPredicted RBP6.03□□□□□ -1.44
VPS41-205ENST00000414632 EYA2O00167 538 aa6.03□□□□□ -1.44
VPS41-205ENST00000414632 GADD45BO75293 160 aaPredicted RBP6.03□□□□□ -1.44
VPS41-205ENST00000414632 EPB42P16452 691 aa6.03□□□□□ -1.44
VPS41-205ENST00000414632 ATP2B1P20020 1258 aa6.03□□□□□ -1.44
VPS41-205ENST00000414632 TYRO3Q06418 890 aa6.03□□□□□ -1.44
VPS41-205ENST00000414632 NXPE4Q6UWF7 544 aa6.03□□□□□ -1.44
VPS41-205ENST00000414632 DLK2Q6UY11 383 aa6.03□□□□□ -1.44
VPS41-205ENST00000414632 HS2ST1Q7LGA3 356 aa6.03□□□□□ -1.44
VPS41-205ENST00000414632 ATG9AQ7Z3C6 839 aa6.03□□□□□ -1.44
VPS41-205ENST00000414632 USP48Q86UV5 1035 aa6.03□□□□□ -1.44
VPS41-205ENST00000414632 C1orf127Q8N9H9 656 aa6.03□□□□□ -1.44
VPS41-205ENST00000414632 SMC1BQ8NDV3 1235 aa6.03□□□□□ -1.44
VPS41-205ENST00000414632 DHX38Q92620 1227 aaKnown RBP6.03□□□□□ -1.44
VPS41-205ENST00000414632 BCO2Q9BYV7 579 aa6.03□□□□□ -1.44
VPS41-205ENST00000414632 CHRDQ9H2X0 955 aa6.03□□□□□ -1.44
VPS41-205ENST00000414632 SRA1Q9HD15 236 aaKnown RBP6.03□□□□□ -1.44
VPS41-205ENST00000414632 CD209Q9NNX6 404 aa6.03□□□□□ -1.44
VPS41-205ENST00000414632 NPHS2Q9NP85 383 aa6.03□□□□□ -1.44
VPS41-205ENST00000414632 FAM8A1Q9UBU6 413 aa6.03□□□□□ -1.44
VPS41-205ENST00000414632 SCAF8Q9UPN6 1271 aaKnown RBP6.03□□□□□ -1.44
VPS41-205ENST00000414632 INPP5FQ9Y2H2 1132 aa6.03□□□□□ -1.44
VPS41-205ENST00000414632 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.03□□□□□ -1.44
VPS41-205ENST00000414632 ASTN2O75129 1339 aaPredicted RBP6.02□□□□□ -1.45
VPS41-205ENST00000414632 FIGNL2A6NMB9 653 aa6.02□□□□□ -1.45
VPS41-205ENST00000414632 TTLL8A6PVC2 850 aa6.02□□□□□ -1.45
VPS41-205ENST00000414632 EREGO14944 169 aa6.02□□□□□ -1.45
VPS41-205ENST00000414632 PDE8BO95263 885 aa6.02□□□□□ -1.45
VPS41-205ENST00000414632 USP17L7P0C7H9 530 aa6.02□□□□□ -1.45
VPS41-205ENST00000414632 HSPA6P17066 643 aa6.02□□□□□ -1.45
VPS41-205ENST00000414632 TFCP2Q12800 502 aa6.02□□□□□ -1.45
VPS41-205ENST00000414632 CHAF1AQ13111 956 aaPredicted RBP6.02□□□□□ -1.45
VPS41-205ENST00000414632 MVPQ14764 893 aaKnown RBP6.02□□□□□ -1.45
VPS41-205ENST00000414632 DACT2Q5SW24 774 aa6.02□□□□□ -1.45
VPS41-205ENST00000414632 MRPL14Q6P1L8 145 aaKnown RBP6.02□□□□□ -1.45
VPS41-205ENST00000414632 ZNF804AQ7Z570 1209 aa6.02□□□□□ -1.45
VPS41-205ENST00000414632 PODNQ7Z5L7 613 aa6.02□□□□□ -1.45
VPS41-205ENST00000414632 LDHDQ86WU2 507 aa6.02□□□□□ -1.45
VPS41-205ENST00000414632 KIAA0825Q8IV33 1275 aa6.02□□□□□ -1.45
VPS41-205ENST00000414632 GALNT12Q8IXK2 581 aa6.02□□□□□ -1.45
VPS41-205ENST00000414632 VGLL2Q8N8G2 317 aa6.02□□□□□ -1.45
VPS41-205ENST00000414632 PMEPA1Q969W9 287 aa6.02□□□□□ -1.45
VPS41-205ENST00000414632 FAM84BQ96KN1 310 aaPredicted RBP6.02□□□□□ -1.45
VPS41-205ENST00000414632 GMLQ99445 158 aa6.02□□□□□ -1.45
VPS41-205ENST00000414632 DNAJC2Q99543 621 aaKnown RBP6.02□□□□□ -1.45
VPS41-205ENST00000414632 COA1Q9GZY4 146 aa6.02□□□□□ -1.45
VPS41-205ENST00000414632 GPAMQ9HCL2 828 aa6.02□□□□□ -1.45
VPS41-205ENST00000414632 ADARB2Q9NS39 739 aaKnown RBP6.02□□□□□ -1.45
VPS41-205ENST00000414632 ABI2Q9NYB9 513 aaPredicted RBP6.02□□□□□ -1.45
VPS41-205ENST00000414632 PCDHAC2Q9Y5I4 1007 aa6.02□□□□□ -1.45
VPS41-205ENST00000414632 MYH2Q9UKX2 1941 aa6.01□□□□□ -1.45
VPS41-205ENST00000414632 H7C1D1 291 aa6.01□□□□□ -1.45
VPS41-205ENST00000414632 TRAF5O00463 557 aa6.01□□□□□ -1.45
VPS41-205ENST00000414632 SMARCA5O60264 1052 aaPredicted RBP6.01□□□□□ -1.45
VPS41-205ENST00000414632 SASH1O94885 1247 aa6.01□□□□□ -1.45
VPS41-205ENST00000414632 VIL1P09327 827 aaKnown RBP6.01□□□□□ -1.45
VPS41-205ENST00000414632 CES1P23141 567 aa6.01□□□□□ -1.45
VPS41-205ENST00000414632 ADORA1P30542 326 aa6.01□□□□□ -1.45
VPS41-205ENST00000414632 DNAJA1P31689 397 aaKnown RBP6.01□□□□□ -1.45
VPS41-205ENST00000414632 HIBADHP31937 336 aaKnown RBP6.01□□□□□ -1.45
VPS41-205ENST00000414632 GTF2F1P35269 517 aaKnown RBP eCLIP6.01□□□□□ -1.45
VPS41-205ENST00000414632 ST13P50502 369 aaKnown RBP6.01□□□□□ -1.45
VPS41-205ENST00000414632 ARID5AQ03989 594 aa6.01□□□□□ -1.45
VPS41-205ENST00000414632 FSTL1Q12841 308 aa6.01□□□□□ -1.45
VPS41-205ENST00000414632 OS9Q13438 667 aaPredicted RBP6.01□□□□□ -1.45
VPS41-205ENST00000414632 UBE4AQ14139 1066 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms