RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 EZH1Q92800 747 aaPredicted RBP4.31□□□□□ -1.72
SF3B1-203ENST00000414174 TSR2Q969E8 191 aaKnown RBP4.31□□□□□ -1.72
SF3B1-203ENST00000414174 ZNF496Q96IT1 587 aaPredicted RBP4.31□□□□□ -1.72
SF3B1-203ENST00000414174 PAWRQ96IZ0 340 aaKnown RBP4.31□□□□□ -1.72
SF3B1-203ENST00000414174 RNPC3Q96LT9 517 aaKnown RBP4.31□□□□□ -1.72
SF3B1-203ENST00000414174 TBC1D32Q96NH3 1257 aa4.31□□□□□ -1.72
SF3B1-203ENST00000414174 SRRTQ9BXP5 876 aaKnown RBP4.31□□□□□ -1.72
SF3B1-203ENST00000414174 TMPRSS13Q9BYE2 586 aa4.31□□□□□ -1.72
SF3B1-203ENST00000414174 CCSER2Q9H7U1 834 aa4.31□□□□□ -1.72
SF3B1-203ENST00000414174 CD248Q9HCU0 757 aa4.31□□□□□ -1.72
SF3B1-203ENST00000414174 COMMD8Q9NX08 183 aa4.31□□□□□ -1.72
SF3B1-203ENST00000414174 CHCHD3Q9NX63 227 aaKnown RBP4.31□□□□□ -1.72
SF3B1-203ENST00000414174 HOXC10Q9NYD6 342 aa4.31□□□□□ -1.72
SF3B1-203ENST00000414174 FBXO2Q9UK22 296 aaPredicted RBP4.31□□□□□ -1.72
SF3B1-203ENST00000414174 PPP2R3BQ9Y5P8 575 aa4.31□□□□□ -1.72
SF3B1-203ENST00000414174 IKBKGQ9Y6K9 419 aa4.31□□□□□ -1.72
SF3B1-203ENST00000414174 ORC4O43929 436 aa4.3□□□□□ -1.72
SF3B1-203ENST00000414174 TRIM37O94972 964 aa4.3□□□□□ -1.72
SF3B1-203ENST00000414174 MYL1P05976 194 aa4.3□□□□□ -1.72
SF3B1-203ENST00000414174 MYL3P08590 195 aa4.3□□□□□ -1.72
SF3B1-203ENST00000414174 ZNF853P0CG23 659 aa4.3□□□□□ -1.72
SF3B1-203ENST00000414174 HOXC13P31276 330 aa4.3□□□□□ -1.72
SF3B1-203ENST00000414174 CABP4P57796 275 aa4.3□□□□□ -1.72
SF3B1-203ENST00000414174 GNL2Q13823 731 aaKnown RBP4.3□□□□□ -1.72
SF3B1-203ENST00000414174 IKBKEQ14164 716 aa4.3□□□□□ -1.72
SF3B1-203ENST00000414174 HLTFQ14527 1009 aaKnown RBP eCLIP4.3□□□□□ -1.72
SF3B1-203ENST00000414174 PLCL1Q15111 1095 aa4.3□□□□□ -1.72
SF3B1-203ENST00000414174 PPP2R5AQ15172 486 aa4.3□□□□□ -1.72
SF3B1-203ENST00000414174 ZNF423Q2M1K9 1284 aa4.3□□□□□ -1.72
SF3B1-203ENST00000414174 C10orf62Q5T681 223 aaPredicted RBP4.3□□□□□ -1.72
SF3B1-203ENST00000414174 TTLL10Q6ZVT0 673 aa4.3□□□□□ -1.72
SF3B1-203ENST00000414174 USP48Q86UV5 1035 aa4.3□□□□□ -1.72
SF3B1-203ENST00000414174 FERMT3Q86UX7 667 aa4.3□□□□□ -1.72
SF3B1-203ENST00000414174 C1QL4Q86Z23 238 aa4.3□□□□□ -1.72
SF3B1-203ENST00000414174 GLYCTKQ8IVS8 523 aa4.3□□□□□ -1.72
SF3B1-203ENST00000414174 RAVER1Q8IY67 606 aaKnown RBP4.3□□□□□ -1.72
SF3B1-203ENST00000414174 TTC16Q8NEE8 873 aa4.3□□□□□ -1.72
SF3B1-203ENST00000414174 MNS1Q8NEH6 495 aa4.3□□□□□ -1.72
SF3B1-203ENST00000414174 ASAP3Q8TDY4 903 aa4.3□□□□□ -1.72
SF3B1-203ENST00000414174 SMCR8Q8TEV9 937 aaPredicted RBP4.3□□□□□ -1.72
SF3B1-203ENST00000414174 GATA6Q92908 595 aa4.3□□□□□ -1.72
SF3B1-203ENST00000414174 CENPTQ96BT3 561 aa4.3□□□□□ -1.72
SF3B1-203ENST00000414174 CCDC34Q96HJ3 373 aa4.3□□□□□ -1.72
SF3B1-203ENST00000414174 MRFAP1L1Q96HT8 127 aa4.3□□□□□ -1.72
SF3B1-203ENST00000414174 MPP4Q96JB8 637 aa4.3□□□□□ -1.72
SF3B1-203ENST00000414174 DNAJC25Q9H1X3 360 aa4.3□□□□□ -1.72
SF3B1-203ENST00000414174 DHX36Q9H2U1 1008 aaKnown RBP4.3□□□□□ -1.72
SF3B1-203ENST00000414174 CYP4F12Q9HCS2 524 aa4.3□□□□□ -1.72
SF3B1-203ENST00000414174 KMT5AQ9NQR1 393 aa4.3□□□□□ -1.72
SF3B1-203ENST00000414174 DCAF16Q9NXF7 216 aa4.3□□□□□ -1.72
SF3B1-203ENST00000414174 IP6K2Q9UHH9 426 aa4.3□□□□□ -1.72
SF3B1-203ENST00000414174 XPO7Q9UIA9 1087 aaKnown RBP4.3□□□□□ -1.72
SF3B1-203ENST00000414174 HDAC9Q9UKV0 1011 aa4.3□□□□□ -1.72
SF3B1-203ENST00000414174 INTUQ9ULD6 942 aa4.3□□□□□ -1.72
SF3B1-203ENST00000414174 MRPS23Q9Y3D9 190 aaKnown RBP4.3□□□□□ -1.72
SF3B1-203ENST00000414174 IL16Q14005 1332 aa4.29□□□□□ -1.72
SF3B1-203ENST00000414174 KIF16BQ96L93 1317 aa4.29□□□□□ -1.72
SF3B1-203ENST00000414174 PRRT4C9JH25 899 aa4.29□□□□□ -1.72
SF3B1-203ENST00000414174 SLC26A4O43511 780 aa4.29□□□□□ -1.72
SF3B1-203ENST00000414174 DIAPH1O60610 1272 aaKnown RBP4.29□□□□□ -1.72
SF3B1-203ENST00000414174 LETM1O95202 739 aaPredicted RBP4.29□□□□□ -1.72
SF3B1-203ENST00000414174 ECEL1O95672 775 aa4.29□□□□□ -1.72
SF3B1-203ENST00000414174 SKILP12757 684 aa4.29□□□□□ -1.72
SF3B1-203ENST00000414174 LMNB1P20700 586 aa4.29□□□□□ -1.72
SF3B1-203ENST00000414174 DNAJA1P31689 397 aaKnown RBP4.29□□□□□ -1.72
SF3B1-203ENST00000414174 RAP1GAPP47736 663 aa4.29□□□□□ -1.72
SF3B1-203ENST00000414174 USP11P51784 963 aa4.29□□□□□ -1.72
SF3B1-203ENST00000414174 ZBED6P86452 979 aa4.29□□□□□ -1.72
SF3B1-203ENST00000414174 RASA3Q14644 834 aa4.29□□□□□ -1.72
SF3B1-203ENST00000414174 DDB1Q16531 1140 aa4.29□□□□□ -1.72
SF3B1-203ENST00000414174 GRAMD1BQ3KR37 738 aa4.29□□□□□ -1.72
SF3B1-203ENST00000414174 AMOTQ4VCS5 1084 aa4.29□□□□□ -1.72
SF3B1-203ENST00000414174 ALFQ53S48 1182 aa4.29□□□□□ -1.72
SF3B1-203ENST00000414174 HYIQ5T013 277 aa4.29□□□□□ -1.72
SF3B1-203ENST00000414174 MFSD4BQ5TF39 518 aa4.29□□□□□ -1.72
SF3B1-203ENST00000414174 JAKMIP3Q5VZ66 844 aa4.29□□□□□ -1.72
SF3B1-203ENST00000414174 TTLL5Q6EMB2 1281 aa4.29□□□□□ -1.72
SF3B1-203ENST00000414174 LCNL1Q6ZST4 164 aa4.29□□□□□ -1.72
SF3B1-203ENST00000414174 HDGFL2Q7Z4V5 671 aaPredicted RBP4.29□□□□□ -1.72
SF3B1-203ENST00000414174 SPRED2Q7Z698 418 aa4.29□□□□□ -1.72
SF3B1-203ENST00000414174 C11orf74Q86VG3 221 aa4.29□□□□□ -1.72
SF3B1-203ENST00000414174 WFDC3Q8IUB2 231 aa4.29□□□□□ -1.72
SF3B1-203ENST00000414174 SAMD14Q8IZD0 417 aaPredicted RBP4.29□□□□□ -1.72
SF3B1-203ENST00000414174 APPL2Q8NEU8 664 aa4.29□□□□□ -1.72
SF3B1-203ENST00000414174 JARID2Q92833 1246 aaPredicted RBP4.29□□□□□ -1.72
SF3B1-203ENST00000414174 ERCC4Q92889 916 aaPredicted RBP4.29□□□□□ -1.72
SF3B1-203ENST00000414174 SYAP1Q96A49 352 aaPredicted RBP4.29□□□□□ -1.72
SF3B1-203ENST00000414174 CDK5RAP3Q96JB5 506 aa4.29□□□□□ -1.72
SF3B1-203ENST00000414174 SLX1AQ9BQ83 275 aa4.29□□□□□ -1.72
SF3B1-203ENST00000414174 TRIM56Q9BRZ2 755 aaKnown RBP4.29□□□□□ -1.72
SF3B1-203ENST00000414174 XPO4Q9C0E2 1151 aaKnown RBP4.29□□□□□ -1.72
SF3B1-203ENST00000414174 SOX17Q9H6I2 414 aaPredicted RBP4.29□□□□□ -1.72
SF3B1-203ENST00000414174 FAM53CQ9NYF3 392 aa4.29□□□□□ -1.72
SF3B1-203ENST00000414174 CGNQ9P2M7 1197 aaKnown RBP4.29□□□□□ -1.72
SF3B1-203ENST00000414174 BIN2Q9UBW5 565 aaPredicted RBP4.29□□□□□ -1.72
SF3B1-203ENST00000414174 EVLQ9UI08 416 aaPredicted RBP4.29□□□□□ -1.72
SF3B1-203ENST00000414174 WASHC2AQ641Q2 1341 aa4.28□□□□□ -1.72
SF3B1-203ENST00000414174 A0A096LPE4 126 aa4.28□□□□□ -1.72
SF3B1-203ENST00000414174 A0A1W2PPZ6 126 aa4.28□□□□□ -1.72
SF3B1-203ENST00000414174 GTPBP10A4D1E9 387 aaKnown RBP4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms