RNA–Protein interactions for RNA: ENST00000413409.6

PTPRC-206, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-206ENST00000413409 ASCC2Q9H1I8 757 aaPredicted RBP19.88■□□□□ 0.77
PTPRC-206ENST00000413409 ZSCAN16Q9H4T2 348 aaPredicted RBP19.88■□□□□ 0.77
PTPRC-206ENST00000413409 RAI14Q9P0K7 980 aa19.88■□□□□ 0.77
PTPRC-206ENST00000413409 NID2Q14112 1375 aa19.88■□□□□ 0.77
PTPRC-206ENST00000413409 DOCK1Q14185 1865 aa19.88■□□□□ 0.77
PTPRC-206ENST00000413409 BDP1A6H8Y1 2624 aa19.87■□□□□ 0.77
PTPRC-206ENST00000413409 NEDD4P46934 1319 aa19.87■□□□□ 0.77
PTPRC-206ENST00000413409 MAGEB6P1A0A0J9YX57 407 aa19.87■□□□□ 0.77
PTPRC-206ENST00000413409 KLF18A0A0U1RQI7 1052 aa19.87■□□□□ 0.77
PTPRC-206ENST00000413409 GOLGA8BA8MQT2 603 aa19.87■□□□□ 0.77
PTPRC-206ENST00000413409 XRCC5P13010 732 aaKnown RBP19.87■□□□□ 0.77
PTPRC-206ENST00000413409 DNM1Q05193 864 aaKnown RBP19.87■□□□□ 0.77
PTPRC-206ENST00000413409 FOXD4L6Q3SYB3 417 aaPredicted RBP19.87■□□□□ 0.77
PTPRC-206ENST00000413409 FOXD4L3Q6VB84 417 aaPredicted RBP19.87■□□□□ 0.77
PTPRC-206ENST00000413409 CHST3Q7LGC8 479 aa19.87■□□□□ 0.77
PTPRC-206ENST00000413409 IDI2Q9BXS1 227 aa19.87■□□□□ 0.77
PTPRC-206ENST00000413409 KRT23Q9C075 422 aa19.87■□□□□ 0.77
PTPRC-206ENST00000413409 SENP6Q9GZR1 1112 aaPredicted RBP19.87■□□□□ 0.77
PTPRC-206ENST00000413409 GDPD2Q9HCC8 539 aa19.87■□□□□ 0.77
PTPRC-206ENST00000413409 MORF4L1Q9UBU8 362 aa19.87■□□□□ 0.77
PTPRC-206ENST00000413409 SLC4A4Q9Y6R1 1079 aa19.87■□□□□ 0.77
PTPRC-206ENST00000413409 H3BQV1 296 aa19.86■□□□□ 0.77
PTPRC-206ENST00000413409 FIBPO43427 364 aa19.86■□□□□ 0.77
PTPRC-206ENST00000413409 GADD45BO75293 160 aaPredicted RBP19.86■□□□□ 0.77
PTPRC-206ENST00000413409 ENTPD3O75355 529 aa19.86■□□□□ 0.77
PTPRC-206ENST00000413409 TDO2P48775 406 aa19.86■□□□□ 0.77
PTPRC-206ENST00000413409 SPP2Q13103 211 aa19.86■□□□□ 0.77
PTPRC-206ENST00000413409 CCL14Q16627 93 aa19.86■□□□□ 0.77
PTPRC-206ENST00000413409 AKNAD1Q5T1N1 836 aa19.86■□□□□ 0.77
PTPRC-206ENST00000413409 USP6NLQ92738 828 aa19.86■□□□□ 0.77
PTPRC-206ENST00000413409 RIOK1Q9BRS2 568 aaKnown RBP19.86■□□□□ 0.77
PTPRC-206ENST00000413409 RNF41Q9H4P4 317 aaPredicted RBP19.86■□□□□ 0.77
PTPRC-206ENST00000413409 ABCF2Q9UG63 623 aa19.86■□□□□ 0.77
PTPRC-206ENST00000413409 ANAPC4Q9UJX5 808 aa19.86■□□□□ 0.77
PTPRC-206ENST00000413409 ATN1P54259 1190 aaPredicted RBP19.85■□□□□ 0.77
PTPRC-206ENST00000413409 HMGCS2P54868 508 aa19.85■□□□□ 0.77
PTPRC-206ENST00000413409 GIMAP6Q6P9H5 292 aa19.85■□□□□ 0.77
PTPRC-206ENST00000413409 SGMS1Q86VZ5 419 aa19.85■□□□□ 0.77
PTPRC-206ENST00000413409 ZSCAN29Q8IWY8 852 aaPredicted RBP19.85■□□□□ 0.77
PTPRC-206ENST00000413409 FAM122AQ96E09 287 aa19.85■□□□□ 0.77
PTPRC-206ENST00000413409 SCAND2PQ9GZW5 306 aaPredicted RBP19.85■□□□□ 0.77
PTPRC-206ENST00000413409 DDX4Q9NQI0 724 aaKnown RBP19.85■□□□□ 0.77
PTPRC-206ENST00000413409 BRPF3Q9ULD4 1205 aa19.85■□□□□ 0.77
PTPRC-206ENST00000413409 LTBP2Q14767 1821 aa19.85■□□□□ 0.77
PTPRC-206ENST00000413409 LIFRP42702 1097 aa19.84■□□□□ 0.77
PTPRC-206ENST00000413409 CCT2P78371 535 aaKnown RBP19.84■□□□□ 0.77
PTPRC-206ENST00000413409 SMAD3P84022 425 aaKnown RBP19.84■□□□□ 0.77
PTPRC-206ENST00000413409 LRSAM1Q6UWE0 723 aa19.84■□□□□ 0.77
PTPRC-206ENST00000413409 CYB5R4Q7L1T6 521 aa19.84■□□□□ 0.77
PTPRC-206ENST00000413409 DDX11Q96FC9 970 aa19.84■□□□□ 0.77
PTPRC-206ENST00000413409 NUDT12Q9BQG2 462 aa19.84■□□□□ 0.77
PTPRC-206ENST00000413409 NCOA5Q9HCD5 579 aaKnown RBP19.84■□□□□ 0.77
PTPRC-206ENST00000413409 TXNRD2Q9NNW7 524 aa19.84■□□□□ 0.77
PTPRC-206ENST00000413409 GPHNQ9NQX3 736 aaPredicted RBP19.84■□□□□ 0.77
PTPRC-206ENST00000413409 NCOR1O75376 2440 aa19.84■□□□□ 0.77
PTPRC-206ENST00000413409 LOC285556D6RIA3 1793 aa19.84■□□□□ 0.77
PTPRC-206ENST00000413409 B4E1Z4 1266 aa19.83■□□□□ 0.77
PTPRC-206ENST00000413409 CCDC183Q5T5S1 534 aa19.83■□□□□ 0.77
PTPRC-206ENST00000413409 SPTY2D1Q68D10 685 aaPredicted RBP19.83■□□□□ 0.77
PTPRC-206ENST00000413409 ADGRA1Q86SQ6 560 aa19.83■□□□□ 0.77
PTPRC-206ENST00000413409 FERMT3Q86UX7 667 aa19.83■□□□□ 0.77
PTPRC-206ENST00000413409 MIGA1Q8NAN2 632 aa19.83■□□□□ 0.77
PTPRC-206ENST00000413409 NAP1L2Q9ULW6 460 aaPredicted RBP19.83■□□□□ 0.77
PTPRC-206ENST00000413409 TMEM265A0A087WTH1 108 aa19.82■□□□□ 0.76
PTPRC-206ENST00000413409 FAM196BA6NMK8 535 aa19.82■□□□□ 0.76
PTPRC-206ENST00000413409 PRKAB2O43741 272 aa19.82■□□□□ 0.76
PTPRC-206ENST00000413409 DTNBO60941 627 aa19.82■□□□□ 0.76
PTPRC-206ENST00000413409 LDHBP07195 334 aaKnown RBP19.82■□□□□ 0.76
PTPRC-206ENST00000413409 PCP11498 1178 aaKnown RBP19.82■□□□□ 0.76
PTPRC-206ENST00000413409 HOXD11P31277 338 aaPredicted RBP19.82■□□□□ 0.76
PTPRC-206ENST00000413409 RRP1BQ14684 758 aaKnown RBP19.82■□□□□ 0.76
PTPRC-206ENST00000413409 ATL3Q6DD88 541 aa19.82■□□□□ 0.76
PTPRC-206ENST00000413409 MFSD6Q6ZSS7 791 aa19.82■□□□□ 0.76
PTPRC-206ENST00000413409 NSUN4Q96CB9 384 aaKnown RBP19.82■□□□□ 0.76
PTPRC-206ENST00000413409 CDKL5O76039 1030 aa19.81■□□□□ 0.76
PTPRC-206ENST00000413409 LETM1O95202 739 aaPredicted RBP19.81■□□□□ 0.76
PTPRC-206ENST00000413409 RCAN1P53805 252 aa19.81■□□□□ 0.76
PTPRC-206ENST00000413409 RTP1P59025 263 aa19.81■□□□□ 0.76
PTPRC-206ENST00000413409 ZNF280CQ8ND82 737 aa19.81■□□□□ 0.76
PTPRC-206ENST00000413409 P2RX7Q99572 595 aaKnown RBP19.81■□□□□ 0.76
PTPRC-206ENST00000413409 LY9Q9HBG7 655 aa19.81■□□□□ 0.76
PTPRC-206ENST00000413409 PPARAQ07869 468 aa19.8■□□□□ 0.76
PTPRC-206ENST00000413409 PABPC4Q13310 644 aaKnown RBP eCLIP19.8■□□□□ 0.76
PTPRC-206ENST00000413409 Q3C1V9 767 aa19.8■□□□□ 0.76
PTPRC-206ENST00000413409 MORN1Q5T089 497 aa19.8■□□□□ 0.76
PTPRC-206ENST00000413409 APOA5Q6Q788 366 aa19.8■□□□□ 0.76
PTPRC-206ENST00000413409 TTC6Q86TZ1 520 aa19.8■□□□□ 0.76
PTPRC-206ENST00000413409 TRMT44Q8IYL2 757 aaKnown RBP19.8■□□□□ 0.76
PTPRC-206ENST00000413409 IGDCC4Q8TDY8 1250 aa19.8■□□□□ 0.76
PTPRC-206ENST00000413409 ZNF384Q8TF68 577 aa19.8■□□□□ 0.76
PTPRC-206ENST00000413409 SOCS4Q8WXH5 440 aa19.8■□□□□ 0.76
PTPRC-206ENST00000413409 CPLX1O14810 134 aa19.79■□□□□ 0.76
PTPRC-206ENST00000413409 METAP2P50579 478 aaKnown RBP eCLIP19.79■□□□□ 0.76
PTPRC-206ENST00000413409 MECOMQ03112 1051 aa19.79■□□□□ 0.76
PTPRC-206ENST00000413409 CTDSPL2Q05D32 466 aa19.79■□□□□ 0.76
PTPRC-206ENST00000413409 GRIN2CQ14957 1233 aa19.79■□□□□ 0.76
PTPRC-206ENST00000413409 SART3Q15020 963 aaKnown RBP19.79■□□□□ 0.76
PTPRC-206ENST00000413409 TMEM67Q5HYA8 995 aa19.79■□□□□ 0.76
PTPRC-206ENST00000413409 SH3D19Q5HYK7 790 aa19.79■□□□□ 0.76
PTPRC-206ENST00000413409 CPLX2Q6PUV4 134 aaKnown RBP19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 117.3 ms