RNA–Protein interactions for RNA: ENST00000412342.5

HDAC8-210, Transcript of histone deacetylase 8, humanhuman

TSL 1 (best)

Gene HDAC8, Length 679 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-210ENST00000412342 COA7Q96BR5 231 aa15.45■□□□□ 0.06
HDAC8-210ENST00000412342 MTA3Q9BTC8 594 aa15.45■□□□□ 0.06
HDAC8-210ENST00000412342 KAT14Q9H8E8 782 aa15.45■□□□□ 0.06
HDAC8-210ENST00000412342 GPHNQ9NQX3 736 aaPredicted RBP15.45■□□□□ 0.06
HDAC8-210ENST00000412342 PRR12Q9ULL5 1215 aa15.45■□□□□ 0.06
HDAC8-210ENST00000412342 ZNFX1Q9P2E3 1918 aaKnown RBP15.45■□□□□ 0.06
HDAC8-210ENST00000412342 ZNF536O15090 1300 aa15.44■□□□□ 0.06
HDAC8-210ENST00000412342 FRMPD2Q68DX3 1309 aaPredicted RBP15.44■□□□□ 0.06
HDAC8-210ENST00000412342 CENPFP49454 3210 aa15.44■□□□□ 0.06
HDAC8-210ENST00000412342 IFIT3O14879 490 aaKnown RBP15.44■□□□□ 0.06
HDAC8-210ENST00000412342 PRC1O43663 620 aa15.44■□□□□ 0.06
HDAC8-210ENST00000412342 ERCC3P19447 782 aa15.44■□□□□ 0.06
HDAC8-210ENST00000412342 PLEKHH3Q7Z736 793 aa15.44■□□□□ 0.06
HDAC8-210ENST00000412342 CHURC1Q8WUH1 139 aa15.44■□□□□ 0.06
HDAC8-210ENST00000412342 ARMC5Q96C12 935 aa15.44■□□□□ 0.06
HDAC8-210ENST00000412342 USP26Q9BXU7 913 aa15.44■□□□□ 0.06
HDAC8-210ENST00000412342 LY9Q9HBG7 655 aa15.44■□□□□ 0.06
HDAC8-210ENST00000412342 SNX14Q9Y5W7 946 aa15.44■□□□□ 0.06
HDAC8-210ENST00000412342 SMCHD1A6NHR9 2005 aa15.44■□□□□ 0.06
HDAC8-210ENST00000412342 SH2B2O14492 632 aaPredicted RBP15.43■□□□□ 0.06
HDAC8-210ENST00000412342 FDX1P10109 184 aa15.43■□□□□ 0.06
HDAC8-210ENST00000412342 PTPREP23469 700 aa15.43■□□□□ 0.06
HDAC8-210ENST00000412342 MCM5P33992 734 aa15.43■□□□□ 0.06
HDAC8-210ENST00000412342 SLC16A2P36021 539 aa15.43■□□□□ 0.06
HDAC8-210ENST00000412342 STAT3P40763 770 aa15.43■□□□□ 0.06
HDAC8-210ENST00000412342 OAZ1P54368 228 aa15.43■□□□□ 0.06
HDAC8-210ENST00000412342 EXOSC10Q01780 885 aaKnown RBP15.43■□□□□ 0.06
HDAC8-210ENST00000412342 GRB14Q14449 540 aa15.43■□□□□ 0.06
HDAC8-210ENST00000412342 NEK1Q96PY6 1258 aa15.43■□□□□ 0.06
HDAC8-210ENST00000412342 TEX13BQ9BXU2 312 aa15.43■□□□□ 0.06
HDAC8-210ENST00000412342 RANBP17Q9H2T7 1088 aaKnown RBP15.43■□□□□ 0.06
HDAC8-210ENST00000412342 MROH8Q9H579 483 aa15.43■□□□□ 0.06
HDAC8-210ENST00000412342 GPCPD1Q9NPB8 672 aa15.43■□□□□ 0.06
HDAC8-210ENST00000412342 RIPK3Q9Y572 518 aa15.43■□□□□ 0.06
HDAC8-210ENST00000412342 PLXNA1Q9UIW2 1896 aa15.42■□□□□ 0.06
HDAC8-210ENST00000412342 ZBED4O75132 1171 aa15.42■□□□□ 0.06
HDAC8-210ENST00000412342 SLC25A27O95847 323 aa15.42■□□□□ 0.06
HDAC8-210ENST00000412342 GOLGA8HP0CJ92 632 aa15.42■□□□□ 0.06
HDAC8-210ENST00000412342 TROAPQ12815 778 aa15.42■□□□□ 0.06
HDAC8-210ENST00000412342 PLS1Q14651 629 aa15.42■□□□□ 0.06
HDAC8-210ENST00000412342 WTAPQ15007 396 aa15.42■□□□□ 0.06
HDAC8-210ENST00000412342 TMEM67Q5HYA8 995 aa15.42■□□□□ 0.06
HDAC8-210ENST00000412342 GPATCH4Q5T3I0 446 aaKnown RBP15.42■□□□□ 0.06
HDAC8-210ENST00000412342 SYDE2Q5VT97 1194 aa15.42■□□□□ 0.06
HDAC8-210ENST00000412342 RAET1EQ8TD07 263 aa15.42■□□□□ 0.06
HDAC8-210ENST00000412342 PXYLP1Q8TE99 480 aa15.42■□□□□ 0.06
HDAC8-210ENST00000412342 SOCS4Q8WXH5 440 aa15.42■□□□□ 0.06
HDAC8-210ENST00000412342 ZNF333Q96JL9 665 aa15.42■□□□□ 0.06
HDAC8-210ENST00000412342 TMEM87BQ96K49 555 aa15.42■□□□□ 0.06
HDAC8-210ENST00000412342 CPVLQ9H3G5 476 aa15.42■□□□□ 0.06
HDAC8-210ENST00000412342 RAVER2Q9HCJ3 691 aaKnown RBP15.42■□□□□ 0.06
HDAC8-210ENST00000412342 WDR19Q8NEZ3 1342 aa15.42■□□□□ 0.06
HDAC8-210ENST00000412342 SLC15A5A6NIM6 579 aa15.41■□□□□ 0.06
HDAC8-210ENST00000412342 IGHA2P01877 340 aa15.41■□□□□ 0.06
HDAC8-210ENST00000412342 ZKSCAN1P17029 563 aaPredicted RBP15.41■□□□□ 0.06
HDAC8-210ENST00000412342 KRT32Q14532 448 aa15.41■□□□□ 0.06
HDAC8-210ENST00000412342 SART3Q15020 963 aaKnown RBP15.41■□□□□ 0.06
HDAC8-210ENST00000412342 ASPRV1Q53RT3 343 aa15.41■□□□□ 0.06
HDAC8-210ENST00000412342 SNRNP48Q6IEG0 339 aaKnown RBP15.41■□□□□ 0.06
HDAC8-210ENST00000412342 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.41■□□□□ 0.06
HDAC8-210ENST00000412342 NCAPG2Q86XI2 1143 aa15.41■□□□□ 0.06
HDAC8-210ENST00000412342 SH3TC2Q8TF17 1288 aa15.41■□□□□ 0.06
HDAC8-210ENST00000412342 NUDT12Q9BQG2 462 aa15.41■□□□□ 0.06
HDAC8-210ENST00000412342 ISY1Q9ULR0 285 aaKnown RBP15.41■□□□□ 0.06
HDAC8-210ENST00000412342 LCTP09848 1927 aa15.41■□□□□ 0.06
HDAC8-210ENST00000412342 ERICH2A1L162 156 aa15.4■□□□□ 0.06
HDAC8-210ENST00000412342 PALM3A6NDB9 673 aaPredicted RBP15.4■□□□□ 0.06
HDAC8-210ENST00000412342 ADCY3O60266 1144 aa15.4■□□□□ 0.06
HDAC8-210ENST00000412342 HOXC6P09630 235 aa15.4■□□□□ 0.06
HDAC8-210ENST00000412342 XRCC5P13010 732 aaKnown RBP15.4■□□□□ 0.06
HDAC8-210ENST00000412342 ELNP15502 786 aa15.4■□□□□ 0.06
HDAC8-210ENST00000412342 GRK4P32298 578 aa15.4■□□□□ 0.06
HDAC8-210ENST00000412342 COPB2P35606 906 aa15.4■□□□□ 0.06
HDAC8-210ENST00000412342 LIFRP42702 1097 aa15.4■□□□□ 0.06
HDAC8-210ENST00000412342 SNAP25P60880 206 aa15.4■□□□□ 0.06
HDAC8-210ENST00000412342 IKQ13123 557 aaPredicted RBP15.4■□□□□ 0.06
HDAC8-210ENST00000412342 MAP2K5Q13163 448 aa15.4■□□□□ 0.06
HDAC8-210ENST00000412342 GRM4Q14833 912 aa15.4■□□□□ 0.06
HDAC8-210ENST00000412342 SLC35G1Q2M3R5 365 aa15.4■□□□□ 0.06
HDAC8-210ENST00000412342 SLC9C1Q4G0N8 1177 aa15.4■□□□□ 0.06
HDAC8-210ENST00000412342 WDR78Q5VTH9 848 aa15.4■□□□□ 0.06
HDAC8-210ENST00000412342 DHX32Q7L7V1 743 aaKnown RBP15.4■□□□□ 0.06
HDAC8-210ENST00000412342 CCAR1Q8IX12 1150 aaKnown RBP15.4■□□□□ 0.06
HDAC8-210ENST00000412342 ABRAQ8N0Z2 381 aa15.4■□□□□ 0.06
HDAC8-210ENST00000412342 CPXCR1Q8N123 301 aa15.4■□□□□ 0.06
HDAC8-210ENST00000412342 STAG2Q8N3U4 1231 aa15.4■□□□□ 0.06
HDAC8-210ENST00000412342 SLAIN1Q8ND83 568 aa15.4■□□□□ 0.06
HDAC8-210ENST00000412342 LRRC2Q9BYS8 371 aa15.4■□□□□ 0.06
HDAC8-210ENST00000412342 MAD2L2Q9UI95 211 aa15.4■□□□□ 0.06
HDAC8-210ENST00000412342 MYH6P13533 1939 aa15.4■□□□□ 0.06
HDAC8-210ENST00000412342 STRNO43815 780 aa15.39■□□□□ 0.05
HDAC8-210ENST00000412342 PARP1P09874 1014 aaKnown RBP15.39■□□□□ 0.05
HDAC8-210ENST00000412342 TAL1P17542 331 aaPredicted RBP15.39■□□□□ 0.05
HDAC8-210ENST00000412342 CYP2B6P20813 491 aa15.39■□□□□ 0.05
HDAC8-210ENST00000412342 ADORA2AP29274 412 aa15.39■□□□□ 0.05
HDAC8-210ENST00000412342 RGS2P41220 211 aa15.39■□□□□ 0.05
HDAC8-210ENST00000412342 C8orf34Q49A92 452 aa15.39■□□□□ 0.05
HDAC8-210ENST00000412342 SGMS1Q86VZ5 419 aa15.39■□□□□ 0.05
HDAC8-210ENST00000412342 ZNF654Q8IZM8 581 aa15.39■□□□□ 0.05
HDAC8-210ENST00000412342 NPLOC4Q8TAT6 608 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms