RNA–Protein interactions for RNA: ENST00000412056.5

CPNE1-206, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 998 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-206ENST00000412056 CASTP20810 708 aaKnown RBP16.32■□□□□ 0.2
CPNE1-206ENST00000412056 SLC16A2P36021 539 aa16.32■□□□□ 0.2
CPNE1-206ENST00000412056 FCGRTP55899 365 aa16.32■□□□□ 0.2
CPNE1-206ENST00000412056 PLS1Q14651 629 aa16.32■□□□□ 0.2
CPNE1-206ENST00000412056 TMEM132BQ14DG7 1078 aa16.32■□□□□ 0.2
CPNE1-206ENST00000412056 BLOC1S2Q6QNY1 142 aa16.32■□□□□ 0.2
CPNE1-206ENST00000412056 SPATC1LQ9H0A9 340 aa16.32■□□□□ 0.2
CPNE1-206ENST00000412056 EFCC1Q9HA90 598 aa16.32■□□□□ 0.2
CPNE1-206ENST00000412056 PRR12Q9ULL5 1215 aa16.32■□□□□ 0.2
CPNE1-206ENST00000412056 PLXNA1Q9UIW2 1896 aa16.31■□□□□ 0.2
CPNE1-206ENST00000412056 EIF5BO60841 1220 aaKnown RBP16.31■□□□□ 0.2
CPNE1-206ENST00000412056 HMGB1P09429 215 aaKnown RBP16.31■□□□□ 0.2
CPNE1-206ENST00000412056 SNAP25P60880 206 aa16.31■□□□□ 0.2
CPNE1-206ENST00000412056 ASPRV1Q53RT3 343 aa16.31■□□□□ 0.2
CPNE1-206ENST00000412056 GPATCH4Q5T3I0 446 aaKnown RBP16.31■□□□□ 0.2
CPNE1-206ENST00000412056 SYDE2Q5VT97 1194 aa16.31■□□□□ 0.2
CPNE1-206ENST00000412056 BTNL9Q6UXG8 535 aa16.31■□□□□ 0.2
CPNE1-206ENST00000412056 NFXL1Q6ZNB6 911 aa16.31■□□□□ 0.2
CPNE1-206ENST00000412056 ZNF654Q8IZM8 581 aa16.31■□□□□ 0.2
CPNE1-206ENST00000412056 MYL10Q9BUA6 226 aa16.31■□□□□ 0.2
CPNE1-206ENST00000412056 MOV10L1Q9BXT6 1211 aaKnown RBP16.31■□□□□ 0.2
CPNE1-206ENST00000412056 CPVLQ9H3G5 476 aa16.31■□□□□ 0.2
CPNE1-206ENST00000412056 ZNF214Q9UL59 606 aaPredicted RBP16.31■□□□□ 0.2
CPNE1-206ENST00000412056 ZNF236Q9UL36 1845 aa16.31■□□□□ 0.2
CPNE1-206ENST00000412056 CCDC69A6NI79 296 aa16.3■□□□□ 0.2
CPNE1-206ENST00000412056 TNPO2O14787 897 aaKnown RBP16.3■□□□□ 0.2
CPNE1-206ENST00000412056 PARP1P09874 1014 aaKnown RBP16.3■□□□□ 0.2
CPNE1-206ENST00000412056 RPS6KB1P23443 525 aa16.3■□□□□ 0.2
CPNE1-206ENST00000412056 PSMA5P28066 241 aa16.3■□□□□ 0.2
CPNE1-206ENST00000412056 LIFRP42702 1097 aa16.3■□□□□ 0.2
CPNE1-206ENST00000412056 CCNA1P78396 465 aa16.3■□□□□ 0.2
CPNE1-206ENST00000412056 GRM4Q14833 912 aa16.3■□□□□ 0.2
CPNE1-206ENST00000412056 CATIPQ7Z7H3 387 aa16.3■□□□□ 0.2
CPNE1-206ENST00000412056 STAG2Q8N3U4 1231 aa16.3■□□□□ 0.2
CPNE1-206ENST00000412056 UBA5Q9GZZ9 404 aa16.3■□□□□ 0.2
CPNE1-206ENST00000412056 SLC38A10Q9HBR0 1119 aa16.3■□□□□ 0.2
CPNE1-206ENST00000412056 RAVER2Q9HCJ3 691 aaKnown RBP16.3■□□□□ 0.2
CPNE1-206ENST00000412056 ZBED4O75132 1171 aa16.29■□□□□ 0.2
CPNE1-206ENST00000412056 MAPK4P31152 587 aa16.29■□□□□ 0.2
CPNE1-206ENST00000412056 TROAPQ12815 778 aa16.29■□□□□ 0.2
CPNE1-206ENST00000412056 ARHGEF6Q15052 776 aa16.29■□□□□ 0.2
CPNE1-206ENST00000412056 WDR78Q5VTH9 848 aa16.29■□□□□ 0.2
CPNE1-206ENST00000412056 RAB11FIP4Q86YS3 637 aa16.29■□□□□ 0.2
CPNE1-206ENST00000412056 CPXCR1Q8N123 301 aa16.29■□□□□ 0.2
CPNE1-206ENST00000412056 TMTC2Q8N394 836 aa16.29■□□□□ 0.2
CPNE1-206ENST00000412056 NUP133Q8WUM0 1156 aa16.29■□□□□ 0.2
CPNE1-206ENST00000412056 MCOLN1Q9GZU1 580 aa16.29■□□□□ 0.2
CPNE1-206ENST00000412056 SRRDQ9UH36 339 aa16.29■□□□□ 0.2
CPNE1-206ENST00000412056 MAD2L2Q9UI95 211 aa16.29■□□□□ 0.2
CPNE1-206ENST00000412056 GABRQQ9UN88 632 aa16.29■□□□□ 0.2
CPNE1-206ENST00000412056 CTDP1Q9Y5B0 961 aaPredicted RBP16.29■□□□□ 0.2
CPNE1-206ENST00000412056 RBBP6Q7Z6E9 1792 aaKnown RBP16.28■□□□□ 0.2
CPNE1-206ENST00000412056 ZNF536O15090 1300 aa16.28■□□□□ 0.2
CPNE1-206ENST00000412056 DDAH1O94760 285 aa16.28■□□□□ 0.2
CPNE1-206ENST00000412056 ERCC3P19447 782 aa16.28■□□□□ 0.2
CPNE1-206ENST00000412056 RXRAP19793 462 aa16.28■□□□□ 0.2
CPNE1-206ENST00000412056 STAT3P40763 770 aa16.28■□□□□ 0.2
CPNE1-206ENST00000412056 PRKCZQ05513 592 aa16.28■□□□□ 0.2
CPNE1-206ENST00000412056 SNRNP48Q6IEG0 339 aaKnown RBP16.28■□□□□ 0.2
CPNE1-206ENST00000412056 CCDC174Q6PII3 467 aa16.28■□□□□ 0.2
CPNE1-206ENST00000412056 Q6ZUG5 572 aa16.28■□□□□ 0.2
CPNE1-206ENST00000412056 GPR142Q7Z601 462 aa16.28■□□□□ 0.2
CPNE1-206ENST00000412056 SGMS1Q86VZ5 419 aa16.28■□□□□ 0.2
CPNE1-206ENST00000412056 NCAPG2Q86XI2 1143 aa16.28■□□□□ 0.2
CPNE1-206ENST00000412056 RIOX2Q8IUF8 465 aa16.28■□□□□ 0.2
CPNE1-206ENST00000412056 CCAR1Q8IX12 1150 aaKnown RBP16.28■□□□□ 0.2
CPNE1-206ENST00000412056 SHCBP1Q8NEM2 672 aa16.28■□□□□ 0.2
CPNE1-206ENST00000412056 COA7Q96BR5 231 aa16.28■□□□□ 0.2
CPNE1-206ENST00000412056 UPF3BQ9BZI7 483 aaKnown RBP16.28■□□□□ 0.2
CPNE1-206ENST00000412056 TM6SF1Q9BZW5 370 aa16.28■□□□□ 0.2
CPNE1-206ENST00000412056 RANBP17Q9H2T7 1088 aaKnown RBP16.28■□□□□ 0.2
CPNE1-206ENST00000412056 ZSWIM6Q9HCJ5 1215 aa16.28■□□□□ 0.2
CPNE1-206ENST00000412056 BRPF3Q9ULD4 1205 aa16.28■□□□□ 0.2
CPNE1-206ENST00000412056 LCTP09848 1927 aa16.27■□□□□ 0.2
CPNE1-206ENST00000412056 PALM3A6NDB9 673 aaPredicted RBP16.27■□□□□ 0.2
CPNE1-206ENST00000412056 KLRF2D3W0D1 207 aa16.27■□□□□ 0.2
CPNE1-206ENST00000412056 ATP2A1O14983 1001 aa16.27■□□□□ 0.2
CPNE1-206ENST00000412056 GNRH1P01148 92 aa16.27■□□□□ 0.2
CPNE1-206ENST00000412056 FDX1P10109 184 aa16.27■□□□□ 0.2
CPNE1-206ENST00000412056 TAL1P17542 331 aaPredicted RBP16.27■□□□□ 0.2
CPNE1-206ENST00000412056 SLC4A3P48751 1232 aa16.27■□□□□ 0.2
CPNE1-206ENST00000412056 ANAPC15P60006 121 aa16.27■□□□□ 0.2
CPNE1-206ENST00000412056 FGD1P98174 961 aa16.27■□□□□ 0.2
CPNE1-206ENST00000412056 SLC35G1Q2M3R5 365 aa16.27■□□□□ 0.2
CPNE1-206ENST00000412056 APOA5Q6Q788 366 aa16.27■□□□□ 0.2
CPNE1-206ENST00000412056 RUFY3Q7L099 469 aa16.27■□□□□ 0.2
CPNE1-206ENST00000412056 PLEKHH3Q7Z736 793 aa16.27■□□□□ 0.2
CPNE1-206ENST00000412056 TEX13BQ9BXU2 312 aa16.27■□□□□ 0.2
CPNE1-206ENST00000412056 CWC22Q9HCG8 908 aaKnown RBP16.27■□□□□ 0.2
CPNE1-206ENST00000412056 PTPN22Q9Y2R2 807 aa16.27■□□□□ 0.2
CPNE1-206ENST00000412056 RIPK3Q9Y572 518 aa16.27■□□□□ 0.2
CPNE1-206ENST00000412056 SLC12A7Q9Y666 1083 aa16.27■□□□□ 0.2
CPNE1-206ENST00000412056 PTCH2Q9Y6C5 1203 aa16.27■□□□□ 0.2
CPNE1-206ENST00000412056 KLF18A0A0U1RQI7 1052 aa16.26■□□□□ 0.19
CPNE1-206ENST00000412056 SLC25A27O95847 323 aa16.26■□□□□ 0.19
CPNE1-206ENST00000412056 HOXD10P28358 340 aa16.26■□□□□ 0.19
CPNE1-206ENST00000412056 OAZ1P54368 228 aa16.26■□□□□ 0.19
CPNE1-206ENST00000412056 APOBRQ0VD83 1088 aa16.26■□□□□ 0.19
CPNE1-206ENST00000412056 PKN2Q16513 984 aaKnown RBP16.26■□□□□ 0.19
CPNE1-206ENST00000412056 FBXO46Q6PJ61 603 aaPredicted RBP16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms