RNA–Protein interactions for RNA: ENST00000412036.6

CXXC1-202, Transcript of CXXC finger protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CXXC1, Length 2,280 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-202ENST00000412036 ZNF396Q96N95 335 aaPredicted RBP20.76■□□□□ 0.91
CXXC1-202ENST00000412036 SMARCA1P28370 1054 aa20.75■□□□□ 0.91
CXXC1-202ENST00000412036 ZSCAN23Q3MJ62 389 aa20.75■□□□□ 0.91
CXXC1-202ENST00000412036 DCAF4Q8WV16 495 aa20.75■□□□□ 0.91
CXXC1-202ENST00000412036 RRP36Q96EU6 259 aaKnown RBP20.75■□□□□ 0.91
CXXC1-202ENST00000412036 PTMSP20962 102 aa20.75■□□□□ 0.91
CXXC1-202ENST00000412036 SAFBQ15424 915 aaKnown RBP eCLIP20.75■□□□□ 0.91
CXXC1-202ENST00000412036 APOBEC3FQ8IUX4 373 aaKnown RBP20.75■□□□□ 0.91
CXXC1-202ENST00000412036 GMCL1Q96IK5 515 aa20.75■□□□□ 0.91
CXXC1-202ENST00000412036 FAM83BQ5T0W9 1011 aa20.74■□□□□ 0.91
CXXC1-202ENST00000412036 AXDND1Q5T1B0 1012 aaPredicted RBP20.74■□□□□ 0.91
CXXC1-202ENST00000412036 GPATCH4Q5T3I0 446 aaKnown RBP20.74■□□□□ 0.91
CXXC1-202ENST00000412036 L3MBTL3Q96JM7 780 aaPredicted RBP20.74■□□□□ 0.91
CXXC1-202ENST00000412036 PCDHA6Q9UN73 950 aa20.74■□□□□ 0.91
CXXC1-202ENST00000412036 PCDHA8Q9Y5H6 950 aa20.74■□□□□ 0.91
CXXC1-202ENST00000412036 TMEM232C9JQI7 657 aa20.74■□□□□ 0.91
CXXC1-202ENST00000412036 POTEIP0CG38 1075 aa20.74■□□□□ 0.91
CXXC1-202ENST00000412036 POTEJP0CG39 1038 aa20.74■□□□□ 0.91
CXXC1-202ENST00000412036 PIK3AP1Q6ZUJ8 805 aa20.74■□□□□ 0.91
CXXC1-202ENST00000412036 ZNF341Q9BYN7 854 aa20.74■□□□□ 0.91
CXXC1-202ENST00000412036 NR1I2O75469 434 aa20.73■□□□□ 0.91
CXXC1-202ENST00000412036 BLIDQ8IZY5 108 aa20.73■□□□□ 0.91
CXXC1-202ENST00000412036 CLIC6Q96NY7 704 aa20.73■□□□□ 0.91
CXXC1-202ENST00000412036 SH3GLB2Q9NR46 395 aa20.73■□□□□ 0.91
CXXC1-202ENST00000412036 FBXO28Q9NVF7 368 aa20.73■□□□□ 0.91
CXXC1-202ENST00000412036 ZNF112Q9UJU3 913 aa20.73■□□□□ 0.91
CXXC1-202ENST00000412036 PCDHA4Q9UN74 947 aa20.73■□□□□ 0.91
CXXC1-202ENST00000412036 MBD3O95983 291 aa20.73■□□□□ 0.91
CXXC1-202ENST00000412036 ASNSP08243 561 aa20.73■□□□□ 0.91
CXXC1-202ENST00000412036 XBP1P17861 261 aa20.73■□□□□ 0.91
CXXC1-202ENST00000412036 LMOD1P29536 600 aaPredicted RBP20.73■□□□□ 0.91
CXXC1-202ENST00000412036 NAPAP54920 295 aa20.73■□□□□ 0.91
CXXC1-202ENST00000412036 SLC39A14Q15043 492 aa20.73■□□□□ 0.91
CXXC1-202ENST00000412036 QRICH1Q2TAL8 776 aa20.73■□□□□ 0.91
CXXC1-202ENST00000412036 WRNIP1Q96S55 665 aa20.73■□□□□ 0.91
CXXC1-202ENST00000412036 ZMYND12Q9H0C1 365 aa20.73■□□□□ 0.91
CXXC1-202ENST00000412036 TMEM260Q9NX78 707 aa20.73■□□□□ 0.91
CXXC1-202ENST00000412036 DOCK1Q14185 1865 aa20.72■□□□□ 0.91
CXXC1-202ENST00000412036 SPTLC2O15270 562 aa20.72■□□□□ 0.91
CXXC1-202ENST00000412036 BMP3P12645 472 aa20.72■□□□□ 0.91
CXXC1-202ENST00000412036 ME1P48163 572 aa20.72■□□□□ 0.91
CXXC1-202ENST00000412036 ATL3Q6DD88 541 aa20.72■□□□□ 0.91
CXXC1-202ENST00000412036 PHIPQ8WWQ0 1821 aa20.72■□□□□ 0.91
CXXC1-202ENST00000412036 GLTPD2A6NH11 291 aa20.71■□□□□ 0.91
CXXC1-202ENST00000412036 EDIL3O43854 480 aa20.71■□□□□ 0.91
CXXC1-202ENST00000412036 YEATS4O95619 227 aa20.71■□□□□ 0.91
CXXC1-202ENST00000412036 STK38Q15208 465 aa20.71■□□□□ 0.91
CXXC1-202ENST00000412036 KLRG1Q96E93 195 aa20.71■□□□□ 0.91
CXXC1-202ENST00000412036 VCPKMTQ9H867 229 aa20.71■□□□□ 0.91
CXXC1-202ENST00000412036 ARHGEF10LQ9HCE6 1279 aa20.71■□□□□ 0.91
CXXC1-202ENST00000412036 SMCO2A6NFE2 343 aa20.71■□□□□ 0.91
CXXC1-202ENST00000412036 CTNND1O60716 968 aaKnown RBP20.71■□□□□ 0.91
CXXC1-202ENST00000412036 SEC63Q9UGP8 760 aaKnown RBP20.71■□□□□ 0.91
CXXC1-202ENST00000412036 PNMA6FA0A0J9YX94 578 aa20.7■□□□□ 0.9
CXXC1-202ENST00000412036 SYCE3A1L190 88 aa20.7■□□□□ 0.9
CXXC1-202ENST00000412036 ZBTB5O15062 677 aa20.7■□□□□ 0.9
CXXC1-202ENST00000412036 EPHX2P34913 555 aa20.7■□□□□ 0.9
CXXC1-202ENST00000412036 FMR1Q06787 632 aaKnown RBP eCLIP20.7■□□□□ 0.9
CXXC1-202ENST00000412036 SNW1Q13573 536 aaKnown RBP20.7■□□□□ 0.9
CXXC1-202ENST00000412036 CDC37Q16543 378 aaPredicted RBP20.7■□□□□ 0.9
CXXC1-202ENST00000412036 MOB2Q70IA6 237 aa20.7■□□□□ 0.9
CXXC1-202ENST00000412036 P2RX7Q99572 595 aaKnown RBP20.7■□□□□ 0.9
CXXC1-202ENST00000412036 USP2O75604 605 aaPredicted RBP20.7■□□□□ 0.9
CXXC1-202ENST00000412036 PPP4R3BQ5MIZ7 849 aa20.7■□□□□ 0.9
CXXC1-202ENST00000412036 DACT1Q9NYF0 836 aa20.7■□□□□ 0.9
CXXC1-202ENST00000412036 PRR12Q9ULL5 1215 aa20.7■□□□□ 0.9
CXXC1-202ENST00000412036 PAPPA2Q9BXP8 1791 aa20.7■□□□□ 0.9
CXXC1-202ENST00000412036 CSPP1Q1MSJ5 1256 aa20.69■□□□□ 0.9
CXXC1-202ENST00000412036 SPECC1Q5M775 1068 aa20.69■□□□□ 0.9
CXXC1-202ENST00000412036 DAGLBQ8NCG7 672 aa20.69■□□□□ 0.9
CXXC1-202ENST00000412036 CNKSR2Q8WXI2 1034 aa20.69■□□□□ 0.9
CXXC1-202ENST00000412036 OTOFQ9HC10 1997 aa20.69■□□□□ 0.9
CXXC1-202ENST00000412036 PITPNM2Q9BZ72 1349 aa20.69■□□□□ 0.9
CXXC1-202ENST00000412036 A0A1B0GVL5 298 aa20.69■□□□□ 0.9
CXXC1-202ENST00000412036 ZNF174Q15697 407 aa20.69■□□□□ 0.9
CXXC1-202ENST00000412036 UBE2SQ16763 222 aa20.69■□□□□ 0.9
CXXC1-202ENST00000412036 SYDE2Q5VT97 1194 aa20.69■□□□□ 0.9
CXXC1-202ENST00000412036 DPY19L2Q6NUT2 758 aa20.69■□□□□ 0.9
CXXC1-202ENST00000412036 BTNL9Q6UXG8 535 aa20.69■□□□□ 0.9
CXXC1-202ENST00000412036 CCAR1Q8IX12 1150 aaKnown RBP20.69■□□□□ 0.9
CXXC1-202ENST00000412036 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.69■□□□□ 0.9
CXXC1-202ENST00000412036 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.69■□□□□ 0.9
CXXC1-202ENST00000412036 BIN2Q9UBW5 565 aaPredicted RBP20.69■□□□□ 0.9
CXXC1-202ENST00000412036 PTPRAP18433 802 aa20.68■□□□□ 0.9
CXXC1-202ENST00000412036 MTMR2Q13614 643 aa20.68■□□□□ 0.9
CXXC1-202ENST00000412036 RILPL1Q5EBL4 403 aa20.68■□□□□ 0.9
CXXC1-202ENST00000412036 SHC4Q6S5L8 630 aa20.68■□□□□ 0.9
CXXC1-202ENST00000412036 ENGASEQ8NFI3 743 aa20.68■□□□□ 0.9
CXXC1-202ENST00000412036 BICD2Q8TD16 824 aa20.68■□□□□ 0.9
CXXC1-202ENST00000412036 TAF1DQ9H5J8 278 aaPredicted RBP20.68■□□□□ 0.9
CXXC1-202ENST00000412036 EMILIN3Q9NT22 766 aa20.68■□□□□ 0.9
CXXC1-202ENST00000412036 OPLAHO14841 1288 aa20.67■□□□□ 0.9
CXXC1-202ENST00000412036 CAMK4Q16566 473 aa20.67■□□□□ 0.9
CXXC1-202ENST00000412036 INF2Q27J81 1249 aa20.67■□□□□ 0.9
CXXC1-202ENST00000412036 KRT26Q7Z3Y9 468 aa20.67■□□□□ 0.9
CXXC1-202ENST00000412036 SCYL3Q8IZE3 742 aa20.67■□□□□ 0.9
CXXC1-202ENST00000412036 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.67■□□□□ 0.93e-6■■■■□ 25.7
CXXC1-202ENST00000412036 SPP2Q13103 211 aa20.67■□□□□ 0.9
CXXC1-202ENST00000412036 JAKMIP3Q5VZ66 844 aa20.67■□□□□ 0.9
CXXC1-202ENST00000412036 SAMD1Q6SPF0 538 aaPredicted RBP20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms