RNA–Protein interactions for RNA: ENST00000411973.3

TRAPPC12-203, Transcript of trafficking protein particle complex 12, humanhuman

TSL 5

Gene TRAPPC12, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-203ENST00000411973 ISY1Q9ULR0 285 aaKnown RBP18.05■□□□□ 0.48
TRAPPC12-203ENST00000411973 FRMPD2Q68DX3 1309 aaPredicted RBP18.04■□□□□ 0.48
TRAPPC12-203ENST00000411973 ATP2A1O14983 1001 aa18.04■□□□□ 0.48
TRAPPC12-203ENST00000411973 ZBED4O75132 1171 aa18.04■□□□□ 0.48
TRAPPC12-203ENST00000411973 PARP1P09874 1014 aaKnown RBP18.04■□□□□ 0.48
TRAPPC12-203ENST00000411973 CASTP20810 708 aaKnown RBP18.04■□□□□ 0.48
TRAPPC12-203ENST00000411973 RPS6KB1P23443 525 aa18.04■□□□□ 0.48
TRAPPC12-203ENST00000411973 FCGRTP55899 365 aa18.04■□□□□ 0.48
TRAPPC12-203ENST00000411973 IKQ13123 557 aaPredicted RBP18.04■□□□□ 0.48
TRAPPC12-203ENST00000411973 TMEM132BQ14DG7 1078 aa18.04■□□□□ 0.48
TRAPPC12-203ENST00000411973 TTBK2Q6IQ55 1244 aa18.04■□□□□ 0.48
TRAPPC12-203ENST00000411973 CTU1Q7Z7A3 348 aaKnown RBP18.04■□□□□ 0.48
TRAPPC12-203ENST00000411973 TRIM47Q96LD4 638 aa18.04■□□□□ 0.48
TRAPPC12-203ENST00000411973 ARHGAP39Q9C0H5 1083 aa18.04■□□□□ 0.48
TRAPPC12-203ENST00000411973 SPATC1LQ9H0A9 340 aa18.04■□□□□ 0.48
TRAPPC12-203ENST00000411973 EFCC1Q9HA90 598 aa18.04■□□□□ 0.48
TRAPPC12-203ENST00000411973 GPCPD1Q9NPB8 672 aa18.04■□□□□ 0.48
TRAPPC12-203ENST00000411973 ZNF214Q9UL59 606 aaPredicted RBP18.04■□□□□ 0.48
TRAPPC12-203ENST00000411973 PRR12Q9ULL5 1215 aa18.04■□□□□ 0.48
TRAPPC12-203ENST00000411973 PALM3A6NDB9 673 aaPredicted RBP18.03■□□□□ 0.48
TRAPPC12-203ENST00000411973 DDAH1O94760 285 aa18.03■□□□□ 0.48
TRAPPC12-203ENST00000411973 CPA1P15085 419 aa18.03■□□□□ 0.48
TRAPPC12-203ENST00000411973 OAZ1P54368 228 aa18.03■□□□□ 0.48
TRAPPC12-203ENST00000411973 GRM4Q14833 912 aa18.03■□□□□ 0.48
TRAPPC12-203ENST00000411973 SYDE2Q5VT97 1194 aa18.03■□□□□ 0.48
TRAPPC12-203ENST00000411973 SAMD1Q6SPF0 538 aaPredicted RBP18.03■□□□□ 0.48
TRAPPC12-203ENST00000411973 RUFY3Q7L099 469 aa18.03■□□□□ 0.48
TRAPPC12-203ENST00000411973 OTOP1Q7RTM1 612 aa18.03■□□□□ 0.48
TRAPPC12-203ENST00000411973 ZNF654Q8IZM8 581 aa18.03■□□□□ 0.48
TRAPPC12-203ENST00000411973 SHCBP1Q8NEM2 672 aa18.03■□□□□ 0.48
TRAPPC12-203ENST00000411973 TCEANC2Q96MN5 208 aa18.03■□□□□ 0.48
TRAPPC12-203ENST00000411973 AGXT2Q9BYV1 514 aa18.03■□□□□ 0.48
TRAPPC12-203ENST00000411973 MAD2L2Q9UI95 211 aa18.03■□□□□ 0.48
TRAPPC12-203ENST00000411973 CCDC69A6NI79 296 aa18.02■□□□□ 0.48
TRAPPC12-203ENST00000411973 FMNL1O95466 1100 aaPredicted RBP18.02■□□□□ 0.48
TRAPPC12-203ENST00000411973 GOLGA8HP0CJ92 632 aa18.02■□□□□ 0.48
TRAPPC12-203ENST00000411973 MAPK4P31152 587 aa18.02■□□□□ 0.48
TRAPPC12-203ENST00000411973 SLC16A2P36021 539 aa18.02■□□□□ 0.48
TRAPPC12-203ENST00000411973 NFXL1Q6ZNB6 911 aa18.02■□□□□ 0.48
TRAPPC12-203ENST00000411973 MOV10L1Q9BXT6 1211 aaKnown RBP18.02■□□□□ 0.48
TRAPPC12-203ENST00000411973 PORCNQ9H237 461 aa18.02■□□□□ 0.48
TRAPPC12-203ENST00000411973 SLC12A7Q9Y666 1083 aa18.02■□□□□ 0.48
TRAPPC12-203ENST00000411973 CYP46A1Q9Y6A2 500 aa18.02■□□□□ 0.48
TRAPPC12-203ENST00000411973 TNPO2O14787 897 aaKnown RBP18.01■□□□□ 0.47
TRAPPC12-203ENST00000411973 SLC25A27O95847 323 aa18.01■□□□□ 0.47
TRAPPC12-203ENST00000411973 CALM1P0DP23 149 aa18.01■□□□□ 0.47
TRAPPC12-203ENST00000411973 CALM2P0DP24 149 aa18.01■□□□□ 0.47
TRAPPC12-203ENST00000411973 CALM3P0DP25 149 aa18.01■□□□□ 0.47
TRAPPC12-203ENST00000411973 STAT3P40763 770 aa18.01■□□□□ 0.47
TRAPPC12-203ENST00000411973 PRMT2P55345 433 aa18.01■□□□□ 0.47
TRAPPC12-203ENST00000411973 PKN2Q16513 984 aaKnown RBP18.01■□□□□ 0.47
TRAPPC12-203ENST00000411973 RIOX2Q8IUF8 465 aa18.01■□□□□ 0.47
TRAPPC12-203ENST00000411973 STAG2Q8N3U4 1231 aa18.01■□□□□ 0.47
TRAPPC12-203ENST00000411973 TEX13BQ9BXU2 312 aa18.01■□□□□ 0.47
TRAPPC12-203ENST00000411973 RANBP17Q9H2T7 1088 aaKnown RBP18.01■□□□□ 0.47
TRAPPC12-203ENST00000411973 TRIM17Q9Y577 477 aa18.01■□□□□ 0.47
TRAPPC12-203ENST00000411973 ZNF536O15090 1300 aa18■□□□□ 0.47
TRAPPC12-203ENST00000411973 KLRF2D3W0D1 207 aa18■□□□□ 0.47
TRAPPC12-203ENST00000411973 HOXD10P28358 340 aa18■□□□□ 0.47
TRAPPC12-203ENST00000411973 COPB2P35606 906 aa18■□□□□ 0.47
TRAPPC12-203ENST00000411973 FGD1P98174 961 aa18■□□□□ 0.47
TRAPPC12-203ENST00000411973 PLS1Q14651 629 aa18■□□□□ 0.47
TRAPPC12-203ENST00000411973 COL13A1Q5TAT6 717 aaPredicted RBP18■□□□□ 0.47
TRAPPC12-203ENST00000411973 Q6ZUG5 572 aa18■□□□□ 0.47
TRAPPC12-203ENST00000411973 CCAR1Q8IX12 1150 aaKnown RBP18■□□□□ 0.47
TRAPPC12-203ENST00000411973 COA7Q96BR5 231 aa18■□□□□ 0.47
TRAPPC12-203ENST00000411973 MROH8Q9H579 483 aa18■□□□□ 0.47
TRAPPC12-203ENST00000411973 SRRDQ9UH36 339 aa18■□□□□ 0.47
TRAPPC12-203ENST00000411973 CTDP1Q9Y5B0 961 aaPredicted RBP18■□□□□ 0.47
TRAPPC12-203ENST00000411973 PLXNB2O15031 1838 aa18■□□□□ 0.47
TRAPPC12-203ENST00000411973 BAZ2BQ9UIF8 2168 aaKnown RBP18■□□□□ 0.47
TRAPPC12-203ENST00000411973 ERCC3P19447 782 aa17.99■□□□□ 0.47
TRAPPC12-203ENST00000411973 RCAN1P53805 252 aa17.99■□□□□ 0.47
TRAPPC12-203ENST00000411973 APOA5Q6Q788 366 aa17.99■□□□□ 0.47
TRAPPC12-203ENST00000411973 SYNE3Q6ZMZ3 975 aa17.99■□□□□ 0.47
TRAPPC12-203ENST00000411973 GPR142Q7Z601 462 aa17.99■□□□□ 0.47
TRAPPC12-203ENST00000411973 PLEKHH3Q7Z736 793 aa17.99■□□□□ 0.47
TRAPPC12-203ENST00000411973 CTCFLQ8NI51 663 aaPredicted RBP17.99■□□□□ 0.47
TRAPPC12-203ENST00000411973 NUP133Q8WUM0 1156 aa17.99■□□□□ 0.47
TRAPPC12-203ENST00000411973 MYL10Q9BUA6 226 aa17.99■□□□□ 0.47
TRAPPC12-203ENST00000411973 UPF3BQ9BZI7 483 aaKnown RBP17.99■□□□□ 0.47
TRAPPC12-203ENST00000411973 UBA5Q9GZZ9 404 aa17.99■□□□□ 0.47
TRAPPC12-203ENST00000411973 RAVER2Q9HCJ3 691 aaKnown RBP17.99■□□□□ 0.47
TRAPPC12-203ENST00000411973 GJD2Q9UKL4 321 aa17.99■□□□□ 0.47
TRAPPC12-203ENST00000411973 BRPF3Q9ULD4 1205 aa17.99■□□□□ 0.47
TRAPPC12-203ENST00000411973 SMCHD1A6NHR9 2005 aa17.99■□□□□ 0.47
TRAPPC12-203ENST00000411973 MYH6P13533 1939 aa17.98■□□□□ 0.47
TRAPPC12-203ENST00000411973 ECM2O94769 699 aaPredicted RBP17.98■□□□□ 0.47
TRAPPC12-203ENST00000411973 ICAM1P05362 532 aa17.98■□□□□ 0.47
TRAPPC12-203ENST00000411973 SMARCA1P28370 1054 aa17.98■□□□□ 0.47
TRAPPC12-203ENST00000411973 KIF5BP33176 963 aa17.98■□□□□ 0.47
TRAPPC12-203ENST00000411973 RBM25P49756 843 aaKnown RBP17.98■□□□□ 0.47
TRAPPC12-203ENST00000411973 EVCP57679 992 aa17.98■□□□□ 0.47
TRAPPC12-203ENST00000411973 SNRNP48Q6IEG0 339 aaKnown RBP17.98■□□□□ 0.47
TRAPPC12-203ENST00000411973 ADGRF4Q8IZF3 695 aa17.98■□□□□ 0.47
TRAPPC12-203ENST00000411973 CPXCR1Q8N123 301 aa17.98■□□□□ 0.47
TRAPPC12-203ENST00000411973 FANCBQ8NB91 859 aa17.98■□□□□ 0.47
TRAPPC12-203ENST00000411973 BRF1Q92994 677 aa17.98■□□□□ 0.47
TRAPPC12-203ENST00000411973 C22orf23Q9BZE7 217 aa17.98■□□□□ 0.47
TRAPPC12-203ENST00000411973 CPVLQ9H3G5 476 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms