RNA–Protein interactions for RNA: ENST00000411650.5

UBP1-203, Transcript of upstream binding protein 1, humanhuman

TSL 5

Gene UBP1, Length 859 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1-203ENST00000411650 PHACTR2O75167 634 aa6.32□□□□□ -1.4
UBP1-203ENST00000411650 SRGNP10124 158 aa6.32□□□□□ -1.4
UBP1-203ENST00000411650 EIF2S2P20042 333 aaKnown RBP6.32□□□□□ -1.4
UBP1-203ENST00000411650 GPTP24298 496 aa6.32□□□□□ -1.4
UBP1-203ENST00000411650 EIF6P56537 245 aaKnown RBP6.32□□□□□ -1.4
UBP1-203ENST00000411650 C19orf57Q0VDD7 668 aa6.32□□□□□ -1.4
UBP1-203ENST00000411650 LCE3BQ5TA77 95 aa6.32□□□□□ -1.4
UBP1-203ENST00000411650 PEAR1Q5VY43 1037 aaPredicted RBP6.32□□□□□ -1.4
UBP1-203ENST00000411650 ALKBH2Q6NS38 261 aa6.32□□□□□ -1.4
UBP1-203ENST00000411650 BEND4Q6ZU67 534 aa6.32□□□□□ -1.4
UBP1-203ENST00000411650 SNX29Q8TEQ0 813 aa6.32□□□□□ -1.4
UBP1-203ENST00000411650 BSNDQ8WZ55 320 aa6.32□□□□□ -1.4
UBP1-203ENST00000411650 LATS2Q9NRM7 1088 aa6.32□□□□□ -1.4
UBP1-203ENST00000411650 LAS1LQ9Y4W2 734 aaKnown RBP6.32□□□□□ -1.4
UBP1-203ENST00000411650 OAS3Q9Y6K5 1087 aaKnown RBP6.32□□□□□ -1.4
UBP1-203ENST00000411650 COL5A3P25940 1745 aaPredicted RBP6.32□□□□□ -1.4
UBP1-203ENST00000411650 PRAMEF22A3QJZ6 481 aa6.31□□□□□ -1.4
UBP1-203ENST00000411650 CARNS1A5YM72 827 aa6.31□□□□□ -1.4
UBP1-203ENST00000411650 MEGF11A6BM72 1044 aa6.31□□□□□ -1.4
UBP1-203ENST00000411650 SART1O43290 800 aaKnown RBP6.31□□□□□ -1.4
UBP1-203ENST00000411650 DLGAP3O95886 979 aa6.31□□□□□ -1.4
UBP1-203ENST00000411650 PPP1R42Q7Z4L9 355 aa6.31□□□□□ -1.4
UBP1-203ENST00000411650 SYNE4Q8N205 404 aa6.31□□□□□ -1.4
UBP1-203ENST00000411650 TTC16Q8NEE8 873 aa6.31□□□□□ -1.4
UBP1-203ENST00000411650 SHKBP1Q8TBC3 707 aa6.31□□□□□ -1.4
UBP1-203ENST00000411650 RBM17Q96I25 401 aaKnown RBP6.31□□□□□ -1.4
UBP1-203ENST00000411650 BHLHE41Q9C0J9 482 aaPredicted RBP6.31□□□□□ -1.4
UBP1-203ENST00000411650 C1orf115Q9H7X2 142 aa6.31□□□□□ -1.4
UBP1-203ENST00000411650 ZNF277Q9NRM2 450 aaPredicted RBP6.31□□□□□ -1.4
UBP1-203ENST00000411650 TSPYL4Q9UJ04 414 aa6.31□□□□□ -1.4
UBP1-203ENST00000411650 HACL1Q9UJ83 578 aa6.31□□□□□ -1.4
UBP1-203ENST00000411650 HIF3AQ9Y2N7 669 aa6.31□□□□□ -1.4
UBP1-203ENST00000411650 KIF13BQ9NQT8 1826 aa6.31□□□□□ -1.4
UBP1-203ENST00000411650 EDN3P14138 238 aa6.3□□□□□ -1.4
UBP1-203ENST00000411650 GP2P55259 537 aaKnown RBP6.3□□□□□ -1.4
UBP1-203ENST00000411650 RIPK4P57078 832 aa6.3□□□□□ -1.4
UBP1-203ENST00000411650 FKBP4Q02790 459 aaKnown RBP eCLIP6.3□□□□□ -1.4
UBP1-203ENST00000411650 AIMP1Q12904 312 aaKnown RBP6.3□□□□□ -1.4
UBP1-203ENST00000411650 IKBKEQ14164 716 aa6.3□□□□□ -1.4
UBP1-203ENST00000411650 NFE2L2Q16236 605 aa6.3□□□□□ -1.4
UBP1-203ENST00000411650 HLFQ16534 295 aa6.3□□□□□ -1.4
UBP1-203ENST00000411650 FDX2Q6P4F2 183 aa6.3□□□□□ -1.4
UBP1-203ENST00000411650 PNMA8AQ86V59 439 aaPredicted RBP6.3□□□□□ -1.4
UBP1-203ENST00000411650 DTX1Q86Y01 620 aa6.3□□□□□ -1.4
UBP1-203ENST00000411650 TMPRSS13Q9BYE2 586 aa6.3□□□□□ -1.4
UBP1-203ENST00000411650 KCNF1Q9H3M0 494 aa6.3□□□□□ -1.4
UBP1-203ENST00000411650 GTF3C3Q9Y5Q9 886 aa6.3□□□□□ -1.4
UBP1-203ENST00000411650 TJP1Q07157 1748 aa6.3□□□□□ -1.4
UBP1-203ENST00000411650 ARFGEF1Q9Y6D6 1849 aa6.29□□□□□ -1.4
UBP1-203ENST00000411650 LTBP3Q9NS15 1303 aa6.29□□□□□ -1.4
UBP1-203ENST00000411650 LOC100289279A0A1B0GTE1 492 aa6.29□□□□□ -1.4
UBP1-203ENST00000411650 ERVV-1B6SEH8 477 aa6.29□□□□□ -1.4
UBP1-203ENST00000411650 FAM13AO94988 1023 aa6.29□□□□□ -1.4
UBP1-203ENST00000411650 TIAF1O95411 115 aa6.29□□□□□ -1.4
UBP1-203ENST00000411650 HSPA1AP0DMV8 641 aaKnown RBP6.29□□□□□ -1.4
UBP1-203ENST00000411650 HSPA1BP0DMV9 641 aaKnown RBP6.29□□□□□ -1.4
UBP1-203ENST00000411650 EPHX2P34913 555 aa6.29□□□□□ -1.4
UBP1-203ENST00000411650 IARSP41252 1262 aaKnown RBP6.29□□□□□ -1.4
UBP1-203ENST00000411650 ARL4DP49703 201 aa6.29□□□□□ -1.4
UBP1-203ENST00000411650 LMOD3Q0VAK6 560 aa6.29□□□□□ -1.4
UBP1-203ENST00000411650 GRM1Q13255 1194 aa6.29□□□□□ -1.4
UBP1-203ENST00000411650 WDR43Q15061 677 aaKnown RBP eCLIP6.29□□□□□ -1.4
UBP1-203ENST00000411650 SGO2Q562F6 1265 aa6.29□□□□□ -1.4
UBP1-203ENST00000411650 LDHDQ86WU2 507 aa6.29□□□□□ -1.4
UBP1-203ENST00000411650 GJD3Q8N144 294 aa6.29□□□□□ -1.4
UBP1-203ENST00000411650 SOX17Q9H6I2 414 aaPredicted RBP6.29□□□□□ -1.4
UBP1-203ENST00000411650 ABT1Q9ULW3 272 aaKnown RBP6.29□□□□□ -1.4
UBP1-203ENST00000411650 CEMIPQ8WUJ3 1361 aa6.29□□□□□ -1.4
UBP1-203ENST00000411650 MRC1P22897 1456 aa6.28□□□□□ -1.4
UBP1-203ENST00000411650 MAP3K15Q6ZN16 1313 aa6.28□□□□□ -1.4
UBP1-203ENST00000411650 METTL12A8MUP2 240 aa6.28□□□□□ -1.4
UBP1-203ENST00000411650 ESRRAP11474 423 aaPredicted RBP6.28□□□□□ -1.4
UBP1-203ENST00000411650 MAP4P27816 1152 aaKnown RBP6.28□□□□□ -1.4
UBP1-203ENST00000411650 GRIK1P39086 918 aa6.28□□□□□ -1.4
UBP1-203ENST00000411650 USP5P45974 858 aa6.28□□□□□ -1.4
UBP1-203ENST00000411650 PRELPP51888 382 aa6.28□□□□□ -1.4
UBP1-203ENST00000411650 EIF4A1P60842 406 aaKnown RBP6.28□□□□□ -1.4
UBP1-203ENST00000411650 EHHADHQ08426 723 aa6.28□□□□□ -1.4
UBP1-203ENST00000411650 ZNF211Q13398 564 aaPredicted RBP6.28□□□□□ -1.4
UBP1-203ENST00000411650 PARP10Q53GL7 1025 aa6.28□□□□□ -1.4
UBP1-203ENST00000411650 TTLL7Q6ZT98 887 aa6.28□□□□□ -1.4
UBP1-203ENST00000411650 NIM1KQ8IY84 436 aa6.28□□□□□ -1.4
UBP1-203ENST00000411650 JMYQ8N9B5 988 aa6.28□□□□□ -1.4
UBP1-203ENST00000411650 SMG8Q8ND04 991 aaKnown RBP6.28□□□□□ -1.4
UBP1-203ENST00000411650 SUPT20HQ8NEM7 779 aa6.28□□□□□ -1.4
UBP1-203ENST00000411650 ASAP3Q8TDY4 903 aa6.28□□□□□ -1.4
UBP1-203ENST00000411650 THUMPD2Q9BTF0 503 aaKnown RBP6.28□□□□□ -1.4
UBP1-203ENST00000411650 USP26Q9BXU7 913 aa6.28□□□□□ -1.4
UBP1-203ENST00000411650 NRSN2Q9GZP1 204 aa6.28□□□□□ -1.4
UBP1-203ENST00000411650 TAF1DQ9H5J8 278 aaPredicted RBP6.28□□□□□ -1.4
UBP1-203ENST00000411650 SUGCTQ9HAC7 445 aa6.28□□□□□ -1.4
UBP1-203ENST00000411650 AFDNP55196 1824 aaKnown RBP6.27□□□□□ -1.41
UBP1-203ENST00000411650 PPIP5K2O43314 1243 aa6.27□□□□□ -1.41
UBP1-203ENST00000411650 GAS2O43903 313 aaKnown RBP6.27□□□□□ -1.41
UBP1-203ENST00000411650 HOXA10P31260 410 aaPredicted RBP6.27□□□□□ -1.41
UBP1-203ENST00000411650 DDX10Q13206 875 aaKnown RBP6.27□□□□□ -1.41
UBP1-203ENST00000411650 AAMPQ13685 434 aa6.27□□□□□ -1.41
UBP1-203ENST00000411650 RALBP1Q15311 655 aa6.27□□□□□ -1.41
UBP1-203ENST00000411650 DEFB115Q30KQ5 88 aa6.27□□□□□ -1.41
UBP1-203ENST00000411650 HSP90AB3PQ58FF7 597 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms