RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 KLRC3Q07444 240 aa20■□□□□ 0.79
MRPL55-220ENST00000411464 SBK1Q52WX2 424 aa20■□□□□ 0.79
MRPL55-220ENST00000411464 GIMAP6Q6P9H5 292 aa20■□□□□ 0.79
MRPL55-220ENST00000411464 LENG1Q96BZ8 264 aaPredicted RBP20■□□□□ 0.79
MRPL55-220ENST00000411464 STARD7Q9NQZ5 370 aa20■□□□□ 0.79
MRPL55-220ENST00000411464 SYNGAP1Q96PV0 1343 aa20■□□□□ 0.79
MRPL55-220ENST00000411464 ROBO3Q96MS0 1386 aa19.99■□□□□ 0.79
MRPL55-220ENST00000411464 ZBED4O75132 1171 aa19.99■□□□□ 0.79
MRPL55-220ENST00000411464 ADAMTS4O75173 837 aa19.99■□□□□ 0.79
MRPL55-220ENST00000411464 FPGSQ05932 587 aa19.99■□□□□ 0.79
MRPL55-220ENST00000411464 CPXCR1Q8N123 301 aa19.99■□□□□ 0.79
MRPL55-220ENST00000411464 MYLIPQ8WY64 445 aa19.99■□□□□ 0.79
MRPL55-220ENST00000411464 TOX2Q96NM4 488 aa19.99■□□□□ 0.79
MRPL55-220ENST00000411464 TTYH1Q9H313 450 aaPredicted RBP19.99■□□□□ 0.79
MRPL55-220ENST00000411464 ECHDC1Q9NTX5 307 aa19.99■□□□□ 0.79
MRPL55-220ENST00000411464 CLIP2Q9UDT6 1046 aa19.99■□□□□ 0.79
MRPL55-220ENST00000411464 RIPK3Q9Y572 518 aa19.99■□□□□ 0.79
MRPL55-220ENST00000411464 MOXD2PA6NHM9 499 aa19.98■□□□□ 0.79
MRPL55-220ENST00000411464 GSG1L2A8MUP6 293 aa19.98■□□□□ 0.79
MRPL55-220ENST00000411464 SMARCA5O60264 1052 aaPredicted RBP19.98■□□□□ 0.79
MRPL55-220ENST00000411464 SNAI1O95863 264 aaPredicted RBP19.98■□□□□ 0.79
MRPL55-220ENST00000411464 NDUFB10O96000 172 aa19.98■□□□□ 0.79
MRPL55-220ENST00000411464 EPHB4P54760 987 aa19.98■□□□□ 0.79
MRPL55-220ENST00000411464 MAMDC4Q6UXC1 1216 aa19.98■□□□□ 0.79
MRPL55-220ENST00000411464 ANKRD33Q7Z3H0 272 aa19.98■□□□□ 0.79
MRPL55-220ENST00000411464 ZNF444Q8N0Y2 327 aaPredicted RBP19.98■□□□□ 0.79
MRPL55-220ENST00000411464 ZNF287Q9HBT7 754 aa19.98■□□□□ 0.79
MRPL55-220ENST00000411464 ZHX1Q9UKY1 873 aaPredicted RBP19.98■□□□□ 0.79
MRPL55-220ENST00000411464 SYNRGQ9UMZ2 1314 aa19.98■□□□□ 0.79
MRPL55-220ENST00000411464 ATP2A1O14983 1001 aa19.97■□□□□ 0.79
MRPL55-220ENST00000411464 DUSP11O75319 330 aaKnown RBP19.97■□□□□ 0.79
MRPL55-220ENST00000411464 FAAP100Q0VG06 881 aa19.97■□□□□ 0.79
MRPL55-220ENST00000411464 KCNA10Q16322 511 aa19.97■□□□□ 0.79
MRPL55-220ENST00000411464 ZNF467Q7Z7K2 595 aaPredicted RBP19.97■□□□□ 0.79
MRPL55-220ENST00000411464 GPATCH3Q96I76 525 aa19.97■□□□□ 0.79
MRPL55-220ENST00000411464 DNAJC25-GNG10A0A024R161 153 aa19.96■□□□□ 0.79
MRPL55-220ENST00000411464 TMEM265A0A087WTH1 108 aa19.96■□□□□ 0.79
MRPL55-220ENST00000411464 FOSL2P15408 326 aa19.96■□□□□ 0.79
MRPL55-220ENST00000411464 ANKRD35Q8N283 1001 aa19.96■□□□□ 0.79
MRPL55-220ENST00000411464 KBTBD3Q8NAB2 608 aa19.96■□□□□ 0.79
MRPL55-220ENST00000411464 KLHDC9Q8NEP7 349 aa19.96■□□□□ 0.79
MRPL55-220ENST00000411464 APPBP2Q92624 585 aa19.96■□□□□ 0.79
MRPL55-220ENST00000411464 KIFC2Q96AC6 838 aa19.96■□□□□ 0.79
MRPL55-220ENST00000411464 VTI1AQ96AJ9 217 aa19.96■□□□□ 0.79
MRPL55-220ENST00000411464 GLT1D1Q96MS3 346 aa19.96■□□□□ 0.79
MRPL55-220ENST00000411464 SPC25Q9HBM1 224 aa19.96■□□□□ 0.79
MRPL55-220ENST00000411464 LTBP2Q14767 1821 aa19.95■□□□□ 0.78
MRPL55-220ENST00000411464 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.95■□□□□ 0.78
MRPL55-220ENST00000411464 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.95■□□□□ 0.78
MRPL55-220ENST00000411464 APPP05067 770 aa19.95■□□□□ 0.78
MRPL55-220ENST00000411464 GNAT2P19087 354 aa19.95■□□□□ 0.78
MRPL55-220ENST00000411464 TDO2P48775 406 aa19.95■□□□□ 0.78
MRPL55-220ENST00000411464 ACVR2BQ13705 512 aa19.95■□□□□ 0.78
MRPL55-220ENST00000411464 DIEXFQ68CQ4 756 aaKnown RBP19.95■□□□□ 0.78
MRPL55-220ENST00000411464 PCSK9Q8NBP7 692 aaKnown RBP19.95■□□□□ 0.78
MRPL55-220ENST00000411464 OSBP2Q969R2 916 aa19.95■□□□□ 0.78
MRPL55-220ENST00000411464 RAVER2Q9HCJ3 691 aaKnown RBP19.95■□□□□ 0.78
MRPL55-220ENST00000411464 FBXO40Q9UH90 709 aa19.95■□□□□ 0.78
MRPL55-220ENST00000411464 FEM1BQ9UK73 627 aa19.95■□□□□ 0.78
MRPL55-220ENST00000411464 RCAN3Q9UKA8 241 aa19.95■□□□□ 0.78
MRPL55-220ENST00000411464 RNF113AO15541 343 aaKnown RBP19.94■□□□□ 0.78
MRPL55-220ENST00000411464 TIMP1P01033 207 aa19.94■□□□□ 0.78
MRPL55-220ENST00000411464 ZFYP08048 801 aaPredicted RBP19.94■□□□□ 0.78
MRPL55-220ENST00000411464 C6orf222P0C671 652 aaPredicted RBP19.94■□□□□ 0.78
MRPL55-220ENST00000411464 CCSAPQ6IQ19 270 aaPredicted RBP19.94■□□□□ 0.78
MRPL55-220ENST00000411464 MKL1Q969V6 931 aa19.94■□□□□ 0.78
MRPL55-220ENST00000411464 ABHD16BQ9H3Z7 469 aa19.94■□□□□ 0.78
MRPL55-220ENST00000411464 SLC38A10Q9HBR0 1119 aa19.94■□□□□ 0.78
MRPL55-220ENST00000411464 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.94■□□□□ 0.78
MRPL55-220ENST00000411464 ELP1O95163 1332 aa19.94■□□□□ 0.78
MRPL55-220ENST00000411464 MROH7Q68CQ1 1323 aa19.94■□□□□ 0.78
MRPL55-220ENST00000411464 IGKV6D-41A0A0C4DH26 115 aa19.93■□□□□ 0.78
MRPL55-220ENST00000411464 GPAA1O43292 621 aa19.93■□□□□ 0.78
MRPL55-220ENST00000411464 PRDM1O75626 825 aa19.93■□□□□ 0.78
MRPL55-220ENST00000411464 OAZ1P54368 228 aa19.93■□□□□ 0.78
MRPL55-220ENST00000411464 CCDC144BQ3MJ40 725 aa19.93■□□□□ 0.78
MRPL55-220ENST00000411464 CCDC174Q6PII3 467 aa19.93■□□□□ 0.78
MRPL55-220ENST00000411464 CHST13Q8NET6 341 aa19.93■□□□□ 0.78
MRPL55-220ENST00000411464 MTMR4Q9NYA4 1195 aa19.93■□□□□ 0.78
MRPL55-220ENST00000411464 SYNPO2Q9UMS6 1093 aa19.93■□□□□ 0.78
MRPL55-220ENST00000411464 TTLL1O95922 423 aa19.92■□□□□ 0.78
MRPL55-220ENST00000411464 ASGR1P07306 291 aa19.92■□□□□ 0.78
MRPL55-220ENST00000411464 CST5P28325 142 aaPredicted RBP19.92■□□□□ 0.78
MRPL55-220ENST00000411464 LRRFIP1Q32MZ4 808 aaKnown RBP19.92■□□□□ 0.78
MRPL55-220ENST00000411464 GNASQ5JWF2 1037 aa19.92■□□□□ 0.78
MRPL55-220ENST00000411464 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.92■□□□□ 0.78
MRPL55-220ENST00000411464 CEP95Q96GE4 821 aa19.92■□□□□ 0.78
MRPL55-220ENST00000411464 BAZ2AQ9UIF9 1905 aaKnown RBP19.92■□□□□ 0.78
MRPL55-220ENST00000411464 MYADML2A6NDP7 307 aa19.91■□□□□ 0.78
MRPL55-220ENST00000411464 PATL2C9JE40 543 aaKnown RBP19.91■□□□□ 0.78
MRPL55-220ENST00000411464 FDX1P10109 184 aa19.91■□□□□ 0.78
MRPL55-220ENST00000411464 DNAJB2P25686 324 aa19.91■□□□□ 0.78
MRPL55-220ENST00000411464 CDK7P50613 346 aa19.91■□□□□ 0.78
MRPL55-220ENST00000411464 MFSD5Q6N075 450 aa19.91■□□□□ 0.78
MRPL55-220ENST00000411464 ARMCX2Q7L311 632 aa19.91■□□□□ 0.78
MRPL55-220ENST00000411464 GMCL1P1Q8NEA9 526 aa19.91■□□□□ 0.78
MRPL55-220ENST00000411464 NACAP1Q9BZK3 213 aa19.91■□□□□ 0.78
MRPL55-220ENST00000411464 EPB41L4AQ9HCS5 686 aaPredicted RBP19.91■□□□□ 0.78
MRPL55-220ENST00000411464 TBX21Q9UL17 535 aa19.91■□□□□ 0.78
MRPL55-220ENST00000411464 ISY1Q9ULR0 285 aaKnown RBP19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms