RNA–Protein interactions for RNA: ENST00000410704.1

RN7SKP54-201, Transcript of RNA, 7SK small nuclear pseudogene 54, humanhuman

BASIC

Gene RN7SKP54, Length 269 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP54-201ENST00000410704 UBA5Q9GZZ9 404 aa11.72□□□□□ -0.53
RN7SKP54-201ENST00000410704 FAM217BQ9NTX9 383 aaPredicted RBP11.72□□□□□ -0.53
RN7SKP54-201ENST00000410704 RBM27Q9P2N5 1060 aaKnown RBP11.72□□□□□ -0.53
RN7SKP54-201ENST00000410704 CTDP1Q9Y5B0 961 aaPredicted RBP11.72□□□□□ -0.53
RN7SKP54-201ENST00000410704 FAM155AB1AL88 458 aaPredicted RBP11.71□□□□□ -0.53
RN7SKP54-201ENST00000410704 HOXA7P31268 230 aaPredicted RBP11.71□□□□□ -0.53
RN7SKP54-201ENST00000410704 HMGN5P82970 282 aaKnown RBP11.71□□□□□ -0.53
RN7SKP54-201ENST00000410704 COG2Q14746 738 aa11.71□□□□□ -0.53
RN7SKP54-201ENST00000410704 TREML2Q5T2D2 321 aa11.71□□□□□ -0.53
RN7SKP54-201ENST00000410704 OTUD7BQ6GQQ9 843 aa11.71□□□□□ -0.53
RN7SKP54-201ENST00000410704 BTNL9Q6UXG8 535 aa11.71□□□□□ -0.53
RN7SKP54-201ENST00000410704 CATSPERGQ6ZRH7 1159 aa11.71□□□□□ -0.53
RN7SKP54-201ENST00000410704 ANKRD23Q86SG2 305 aa11.71□□□□□ -0.53
RN7SKP54-201ENST00000410704 REM2Q8IYK8 340 aaPredicted RBP11.71□□□□□ -0.53
RN7SKP54-201ENST00000410704 ADGRF4Q8IZF3 695 aa11.71□□□□□ -0.53
RN7SKP54-201ENST00000410704 SRBD1Q8N5C6 995 aaKnown RBP11.71□□□□□ -0.53
RN7SKP54-201ENST00000410704 PRPF38AQ8NAV1 312 aaKnown RBP11.71□□□□□ -0.53
RN7SKP54-201ENST00000410704 BRI3BPQ8WY22 251 aa11.71□□□□□ -0.53
RN7SKP54-201ENST00000410704 RRP36Q96EU6 259 aaKnown RBP11.71□□□□□ -0.53
RN7SKP54-201ENST00000410704 INTS4Q96HW7 963 aaKnown RBP11.71□□□□□ -0.53
RN7SKP54-201ENST00000410704 CAPNS2Q96L46 248 aa11.71□□□□□ -0.53
RN7SKP54-201ENST00000410704 SLC26A6Q9BXS9 759 aa11.71□□□□□ -0.53
RN7SKP54-201ENST00000410704 VAT1LQ9HCJ6 419 aa11.71□□□□□ -0.53
RN7SKP54-201ENST00000410704 HOXC10Q9NYD6 342 aa11.71□□□□□ -0.53
RN7SKP54-201ENST00000410704 SEC63Q9UGP8 760 aaKnown RBP11.71□□□□□ -0.53
RN7SKP54-201ENST00000410704 PNMA3Q9UL41 463 aa11.71□□□□□ -0.53
RN7SKP54-201ENST00000410704 SMC3Q9UQE7 1217 aa11.71□□□□□ -0.53
RN7SKP54-201ENST00000410704 SLC45A1Q9Y2W3 748 aa11.71□□□□□ -0.53
RN7SKP54-201ENST00000410704 KIF3AQ9Y496 699 aa11.71□□□□□ -0.53
RN7SKP54-201ENST00000410704 LOC285556D6RIA3 1793 aa11.71□□□□□ -0.54
RN7SKP54-201ENST00000410704 MYPNQ86TC9 1320 aa11.7□□□□□ -0.54
RN7SKP54-201ENST00000410704 PTPDC1A2A3K4 754 aa11.7□□□□□ -0.54
RN7SKP54-201ENST00000410704 TESPA1A2RU30 521 aaPredicted RBP11.7□□□□□ -0.54
RN7SKP54-201ENST00000410704 FMNL1O95466 1100 aaPredicted RBP11.7□□□□□ -0.54
RN7SKP54-201ENST00000410704 FDX1P10109 184 aa11.7□□□□□ -0.54
RN7SKP54-201ENST00000410704 C1QTNF8P60827 252 aa11.7□□□□□ -0.54
RN7SKP54-201ENST00000410704 ST3GAL1Q11201 340 aa11.7□□□□□ -0.54
RN7SKP54-201ENST00000410704 MOGSQ13724 837 aa11.7□□□□□ -0.54
RN7SKP54-201ENST00000410704 GPAT2Q6NUI2 795 aa11.7□□□□□ -0.54
RN7SKP54-201ENST00000410704 FAM184AQ8NB25 1140 aa11.7□□□□□ -0.54
RN7SKP54-201ENST00000410704 NSUN7Q8NE18 718 aaKnown RBP11.7□□□□□ -0.54
RN7SKP54-201ENST00000410704 WASF1Q92558 559 aa11.7□□□□□ -0.54
RN7SKP54-201ENST00000410704 PHKBQ93100 1093 aa11.7□□□□□ -0.54
RN7SKP54-201ENST00000410704 RNF26Q9BY78 433 aaPredicted RBP11.7□□□□□ -0.54
RN7SKP54-201ENST00000410704 CPVLQ9H3G5 476 aa11.7□□□□□ -0.54
RN7SKP54-201ENST00000410704 RIOX1Q9H6W3 641 aa11.7□□□□□ -0.54
RN7SKP54-201ENST00000410704 FBXO28Q9NVF7 368 aa11.7□□□□□ -0.54
RN7SKP54-201ENST00000410704 PPP1R9AQ9ULJ8 1098 aa11.7□□□□□ -0.54
RN7SKP54-201ENST00000410704 PRR12Q9ULL5 1215 aa11.7□□□□□ -0.54
RN7SKP54-201ENST00000410704 V9GY48 417 aaPredicted RBP11.7□□□□□ -0.54
RN7SKP54-201ENST00000410704 CNTNAP5Q8WYK1 1306 aa11.69□□□□□ -0.54
RN7SKP54-201ENST00000410704 STK36Q9NRP7 1315 aa11.69□□□□□ -0.54
RN7SKP54-201ENST00000410704 PTPRFP10586 1907 aa11.69□□□□□ -0.54
RN7SKP54-201ENST00000410704 BTBD19C9JJ37 291 aa11.69□□□□□ -0.54
RN7SKP54-201ENST00000410704 PDHXO00330 501 aa11.69□□□□□ -0.54
RN7SKP54-201ENST00000410704 PRPF3O43395 683 aaKnown RBP11.69□□□□□ -0.54
RN7SKP54-201ENST00000410704 ZBED4O75132 1171 aa11.69□□□□□ -0.54
RN7SKP54-201ENST00000410704 DEXIO95424 95 aa11.69□□□□□ -0.54
RN7SKP54-201ENST00000410704 CTDNEP1O95476 244 aa11.69□□□□□ -0.54
RN7SKP54-201ENST00000410704 HSPA6P17066 643 aa11.69□□□□□ -0.54
RN7SKP54-201ENST00000410704 KIF23Q02241 960 aaPredicted RBP11.69□□□□□ -0.54
RN7SKP54-201ENST00000410704 FUT2Q10981 343 aa11.69□□□□□ -0.54
RN7SKP54-201ENST00000410704 TRAF1Q13077 416 aa11.69□□□□□ -0.54
RN7SKP54-201ENST00000410704 NTRK3Q16288 839 aa11.69□□□□□ -0.54
RN7SKP54-201ENST00000410704 NBPF11Q86T75 865 aa11.69□□□□□ -0.54
RN7SKP54-201ENST00000410704 HOMER1Q86YM7 354 aa11.69□□□□□ -0.54
RN7SKP54-201ENST00000410704 PIBF1Q8WXW3 757 aa11.69□□□□□ -0.54
RN7SKP54-201ENST00000410704 DDX11Q96FC9 970 aa11.69□□□□□ -0.54
RN7SKP54-201ENST00000410704 ASCC2Q9H1I8 757 aaPredicted RBP11.69□□□□□ -0.54
RN7SKP54-201ENST00000410704 JMJD4Q9H9V9 463 aa11.69□□□□□ -0.54
RN7SKP54-201ENST00000410704 ZCCHC17Q9NP64 241 aaKnown RBP11.69□□□□□ -0.54
RN7SKP54-201ENST00000410704 FOXD4L1Q9NU39 408 aa11.69□□□□□ -0.54
RN7SKP54-201ENST00000410704 ORC3Q9UBD5 711 aaPredicted RBP11.69□□□□□ -0.54
RN7SKP54-201ENST00000410704 PNMA2Q9UL42 364 aa11.69□□□□□ -0.54
RN7SKP54-201ENST00000410704 ZBTB5O15062 677 aa11.68□□□□□ -0.54
RN7SKP54-201ENST00000410704 CYTH3O43739 400 aa11.68□□□□□ -0.54
RN7SKP54-201ENST00000410704 JAK2O60674 1132 aa11.68□□□□□ -0.54
RN7SKP54-201ENST00000410704 DSG3P32926 999 aa11.68□□□□□ -0.54
RN7SKP54-201ENST00000410704 CDC37Q16543 378 aaPredicted RBP11.68□□□□□ -0.54
RN7SKP54-201ENST00000410704 IFNL1Q8IU54 200 aa11.68□□□□□ -0.54
RN7SKP54-201ENST00000410704 MB21D1Q8N884 522 aa11.68□□□□□ -0.54
RN7SKP54-201ENST00000410704 SPRYD3Q8NCJ5 442 aa11.68□□□□□ -0.54
RN7SKP54-201ENST00000410704 SMARCC2Q8TAQ2 1214 aa11.68□□□□□ -0.54
RN7SKP54-201ENST00000410704 GTF3C2Q8WUA4 911 aaPredicted RBP11.68□□□□□ -0.54
RN7SKP54-201ENST00000410704 IPO9Q96P70 1041 aaKnown RBP11.68□□□□□ -0.54
RN7SKP54-201ENST00000410704 PIGSQ96S52 555 aa11.68□□□□□ -0.54
RN7SKP54-201ENST00000410704 PARK7Q99497 189 aaKnown RBP11.68□□□□□ -0.54
RN7SKP54-201ENST00000410704 WDR33Q9C0J8 1336 aaKnown RBP11.67□□□□□ -0.54
RN7SKP54-201ENST00000410704 PNMA6FA0A0J9YX94 578 aa11.67□□□□□ -0.54
RN7SKP54-201ENST00000410704 hCG_1642624A0A1W2PR95 340 aa11.67□□□□□ -0.54
RN7SKP54-201ENST00000410704 SPDYE16A6NNV3 312 aaPredicted RBP11.67□□□□□ -0.54
RN7SKP54-201ENST00000410704 VWA5AO00534 786 aa11.67□□□□□ -0.54
RN7SKP54-201ENST00000410704 AOC2O75106 756 aa11.67□□□□□ -0.54
RN7SKP54-201ENST00000410704 PPFIA3O75145 1194 aa11.67□□□□□ -0.54
RN7SKP54-201ENST00000410704 SCG2P13521 617 aa11.67□□□□□ -0.54
RN7SKP54-201ENST00000410704 XBP1P17861 261 aa11.67□□□□□ -0.54
RN7SKP54-201ENST00000410704 GJB2P29033 226 aa11.67□□□□□ -0.54
RN7SKP54-201ENST00000410704 MAP2K2P36507 400 aa11.67□□□□□ -0.54
RN7SKP54-201ENST00000410704 TM4SF4P48230 202 aa11.67□□□□□ -0.54
RN7SKP54-201ENST00000410704 SLC4A3P48751 1232 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms