RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 SBF1O95248 1867 aa15.44■□□□□ 0.06
LIMS1-205ENST00000410093 GLTPD2A6NH11 291 aa15.43■□□□□ 0.06
LIMS1-205ENST00000410093 KLRF2D3W0D1 207 aa15.43■□□□□ 0.06
LIMS1-205ENST00000410093 M0R2N6 131 aa15.43■□□□□ 0.06
LIMS1-205ENST00000410093 KCNJ6P48051 423 aa15.43■□□□□ 0.06
LIMS1-205ENST00000410093 PTGDRQ13258 359 aa15.43■□□□□ 0.06
LIMS1-205ENST00000410093 STRIP1Q5VSL9 837 aa15.43■□□□□ 0.06
LIMS1-205ENST00000410093 PIK3AP1Q6ZUJ8 805 aa15.43■□□□□ 0.06
LIMS1-205ENST00000410093 SH3RF1Q7Z6J0 888 aa15.43■□□□□ 0.06
LIMS1-205ENST00000410093 LRRC8AQ8IWT6 810 aa15.43■□□□□ 0.06
LIMS1-205ENST00000410093 SUPT20HQ8NEM7 779 aa15.43■□□□□ 0.06
LIMS1-205ENST00000410093 SERTAD1Q9UHV2 236 aa15.43■□□□□ 0.06
LIMS1-205ENST00000410093 SLX4Q8IY92 1834 aa15.43■□□□□ 0.06
LIMS1-205ENST00000410093 GREB1LQ9C091 1923 aaPredicted RBP15.43■□□□□ 0.06
LIMS1-205ENST00000410093 BIN1O00499 593 aa15.43■□□□□ 0.06
LIMS1-205ENST00000410093 RIMBP2O15034 1052 aa15.43■□□□□ 0.06
LIMS1-205ENST00000410093 ATP2B1P20020 1258 aa15.43■□□□□ 0.06
LIMS1-205ENST00000410093 DNTTIP2Q5QJE6 756 aaKnown RBP15.43■□□□□ 0.06
LIMS1-205ENST00000410093 PPP1R18Q6NYC8 613 aa15.43■□□□□ 0.06
LIMS1-205ENST00000410093 C7orf43Q8WVR3 580 aa15.43■□□□□ 0.06
LIMS1-205ENST00000410093 ZDHHC15Q96MV8 337 aa15.43■□□□□ 0.06
LIMS1-205ENST00000410093 ZNF830Q96NB3 372 aaPredicted RBP15.43■□□□□ 0.06
LIMS1-205ENST00000410093 SERPINB13Q9UIV8 391 aa15.43■□□□□ 0.06
LIMS1-205ENST00000410093 MAN1B1Q9UKM7 699 aa15.43■□□□□ 0.06
LIMS1-205ENST00000410093 IGKV6D-41A0A0C4DH26 115 aa15.42■□□□□ 0.06
LIMS1-205ENST00000410093 STXBP3O00186 592 aa15.42■□□□□ 0.06
LIMS1-205ENST00000410093 TUBB4AP04350 444 aa15.42■□□□□ 0.06
LIMS1-205ENST00000410093 ZNF174Q15697 407 aa15.42■□□□□ 0.06
LIMS1-205ENST00000410093 STAG2Q8N3U4 1231 aa15.42■□□□□ 0.06
LIMS1-205ENST00000410093 SYMPKQ92797 1274 aaKnown RBP15.42■□□□□ 0.06
LIMS1-205ENST00000410093 ERCC4Q92889 916 aaPredicted RBP15.42■□□□□ 0.06
LIMS1-205ENST00000410093 AK8Q96MA6 479 aa15.42■□□□□ 0.06
LIMS1-205ENST00000410093 CUEDC2Q9H467 287 aa15.42■□□□□ 0.06
LIMS1-205ENST00000410093 RIOX1Q9H6W3 641 aa15.42■□□□□ 0.06
LIMS1-205ENST00000410093 MAGEF1Q9HAY2 307 aa15.42■□□□□ 0.06
LIMS1-205ENST00000410093 USP40Q9NVE5 1235 aa15.42■□□□□ 0.06
LIMS1-205ENST00000410093 RMND1Q9NWS8 449 aa15.42■□□□□ 0.06
LIMS1-205ENST00000410093 MTMR4Q9NYA4 1195 aa15.42■□□□□ 0.06
LIMS1-205ENST00000410093 hCG_1642624A0A1W2PR95 340 aa15.41■□□□□ 0.06
LIMS1-205ENST00000410093 TTLL1O95922 423 aa15.41■□□□□ 0.06
LIMS1-205ENST00000410093 SNHG28P0DPA3 235 aa15.41■□□□□ 0.06
LIMS1-205ENST00000410093 VEGFAP15692 232 aaPredicted RBP15.41■□□□□ 0.06
LIMS1-205ENST00000410093 HOXA7P31268 230 aaPredicted RBP15.41■□□□□ 0.06
LIMS1-205ENST00000410093 PRELPP51888 382 aa15.41■□□□□ 0.06
LIMS1-205ENST00000410093 FANCCQ00597 558 aa15.41■□□□□ 0.06
LIMS1-205ENST00000410093 EARS2Q5JPH6 523 aaKnown RBP15.41■□□□□ 0.06
LIMS1-205ENST00000410093 FOXP4Q8IVH2 680 aaPredicted RBP15.41■□□□□ 0.06
LIMS1-205ENST00000410093 SLC44A5Q8NCS7 719 aa15.41■□□□□ 0.06
LIMS1-205ENST00000410093 CEP95Q96GE4 821 aa15.41■□□□□ 0.06
LIMS1-205ENST00000410093 GLT8D2Q9H1C3 349 aa15.41■□□□□ 0.06
LIMS1-205ENST00000410093 BAZ2BQ9UIF8 2168 aaKnown RBP15.4■□□□□ 0.06
LIMS1-205ENST00000410093 CYTH3O43739 400 aa15.4■□□□□ 0.06
LIMS1-205ENST00000410093 GRIN1Q05586 938 aa15.4■□□□□ 0.06
LIMS1-205ENST00000410093 GPATCH4Q5T3I0 446 aaKnown RBP15.4■□□□□ 0.06
LIMS1-205ENST00000410093 WWC2Q6AWC2 1192 aa15.4■□□□□ 0.06
LIMS1-205ENST00000410093 DTHD1Q6ZMT9 781 aa15.4■□□□□ 0.06
LIMS1-205ENST00000410093 HEATR3Q7Z4Q2 680 aa15.4■□□□□ 0.06
LIMS1-205ENST00000410093 CCDC112Q8NEF3 446 aa15.4■□□□□ 0.06
LIMS1-205ENST00000410093 PAGE5Q96GU1 130 aa15.4■□□□□ 0.06
LIMS1-205ENST00000410093 IFNKQ9P0W0 207 aa15.4■□□□□ 0.06
LIMS1-205ENST00000410093 PCDHA6Q9UN73 950 aa15.4■□□□□ 0.06
LIMS1-205ENST00000410093 R3HCC1Q9Y3T6 440 aaKnown RBP15.4■□□□□ 0.06
LIMS1-205ENST00000410093 PCDHA8Q9Y5H6 950 aa15.4■□□□□ 0.06
LIMS1-205ENST00000410093 COL2A1P02458 1487 aaPredicted RBP15.39■□□□□ 0.05
LIMS1-205ENST00000410093 VWA3AA6NCI4 1184 aa15.39■□□□□ 0.05
LIMS1-205ENST00000410093 KIF2AO00139 706 aaPredicted RBP15.39■□□□□ 0.05
LIMS1-205ENST00000410093 CCP110O43303 1012 aa15.39■□□□□ 0.05
LIMS1-205ENST00000410093 HSPA6P17066 643 aa15.39■□□□□ 0.05
LIMS1-205ENST00000410093 NAPAP54920 295 aa15.39■□□□□ 0.05
LIMS1-205ENST00000410093 SPECC1Q5M775 1068 aa15.39■□□□□ 0.05
LIMS1-205ENST00000410093 CERS5Q8N5B7 392 aa15.39■□□□□ 0.05
LIMS1-205ENST00000410093 C4orf32Q8N8J7 132 aa15.39■□□□□ 0.05
LIMS1-205ENST00000410093 RBM46Q8TBY0 533 aaKnown RBP15.39■□□□□ 0.05
LIMS1-205ENST00000410093 CACTINQ8WUQ7 758 aaKnown RBP15.39■□□□□ 0.05
LIMS1-205ENST00000410093 JDP2Q8WYK2 163 aa15.39■□□□□ 0.05
LIMS1-205ENST00000410093 IDI2Q9BXS1 227 aa15.39■□□□□ 0.05
LIMS1-205ENST00000410093 XPO4Q9C0E2 1151 aaKnown RBP15.39■□□□□ 0.05
LIMS1-205ENST00000410093 CCSER1Q9C0I3 900 aa15.39■□□□□ 0.05
LIMS1-205ENST00000410093 ZNF277Q9NRM2 450 aaPredicted RBP15.39■□□□□ 0.05
LIMS1-205ENST00000410093 SERPINA10Q9UK55 444 aa15.39■□□□□ 0.05
LIMS1-205ENST00000410093 FER1L6Q2WGJ9 1857 aa15.39■□□□□ 0.05
LIMS1-205ENST00000410093 ZNF646O15015 1829 aaPredicted RBP15.39■□□□□ 0.05
LIMS1-205ENST00000410093 PSME4Q14997 1843 aa15.39■□□□□ 0.05
LIMS1-205ENST00000410093 FAM205CA6NFA0 338 aa15.38■□□□□ 0.05
LIMS1-205ENST00000410093 GTPBP6O43824 516 aaPredicted RBP15.38■□□□□ 0.05
LIMS1-205ENST00000410093 SERPINC1P01008 464 aa15.38■□□□□ 0.05
LIMS1-205ENST00000410093 PDHBP11177 359 aa15.38■□□□□ 0.05
LIMS1-205ENST00000410093 MCM7P33993 719 aa15.38■□□□□ 0.05
LIMS1-205ENST00000410093 UBASH3AP57075 661 aa15.38■□□□□ 0.05
LIMS1-205ENST00000410093 DPYDQ12882 1025 aa15.38■□□□□ 0.05
LIMS1-205ENST00000410093 NONOQ15233 471 aaKnown RBP eCLIP15.38■□□□□ 0.05
LIMS1-205ENST00000410093 CDC42EP5Q6NZY7 148 aa15.38■□□□□ 0.05
LIMS1-205ENST00000410093 TEX2Q8IWB9 1127 aa15.38■□□□□ 0.05
LIMS1-205ENST00000410093 FBXW7Q969H0 707 aa15.38■□□□□ 0.05
LIMS1-205ENST00000410093 DHX58Q96C10 678 aa15.38■□□□□ 0.05
LIMS1-205ENST00000410093 PSMD1Q99460 953 aa15.38■□□□□ 0.05
LIMS1-205ENST00000410093 NAP1L4Q99733 375 aaKnown RBP15.38■□□□□ 0.05
LIMS1-205ENST00000410093 NRBP1Q9UHY1 535 aa15.38■□□□□ 0.05
LIMS1-205ENST00000410093 PYCARDQ9ULZ3 195 aa15.38■□□□□ 0.05
LIMS1-205ENST00000410093 SYNPO2Q9UMS6 1093 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms