RNA–Protein interactions for RNA: ENST00000409739.2

TRAF3IP1-203, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 1,070 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-203ENST00000409739 ANKS1AQ92625 1134 aa36.62■■■■□ 3.45
TRAF3IP1-203ENST00000409739 IVNS1ABPQ9Y6Y0 642 aa36.62■■■■□ 3.45
TRAF3IP1-203ENST00000409739 PDHBP11177 359 aa36.61■■■■□ 3.45
TRAF3IP1-203ENST00000409739 CYP2B6P20813 491 aa36.61■■■■□ 3.45
TRAF3IP1-203ENST00000409739 NECTIN1Q15223 517 aa36.61■■■■□ 3.45
TRAF3IP1-203ENST00000409739 NCAPG2Q86XI2 1143 aa36.61■■■■□ 3.45
TRAF3IP1-203ENST00000409739 RIOX2Q8IUF8 465 aa36.61■■■■□ 3.45
TRAF3IP1-203ENST00000409739 NCOA7Q8NI08 942 aa36.61■■■■□ 3.45
TRAF3IP1-203ENST00000409739 CHURC1Q8WUH1 139 aa36.61■■■■□ 3.45
TRAF3IP1-203ENST00000409739 SLC38A10Q9HBR0 1119 aa36.61■■■■□ 3.45
TRAF3IP1-203ENST00000409739 SMCHD1A6NHR9 2005 aa36.61■■■■□ 3.45
TRAF3IP1-203ENST00000409739 SLC15A5A6NIM6 579 aa36.6■■■■□ 3.45
TRAF3IP1-203ENST00000409739 SLC27A2O14975 620 aa36.6■■■■□ 3.45
TRAF3IP1-203ENST00000409739 STAT3P40763 770 aa36.6■■■■□ 3.45
TRAF3IP1-203ENST00000409739 IKQ13123 557 aaPredicted RBP36.6■■■■□ 3.45
TRAF3IP1-203ENST00000409739 GRB14Q14449 540 aa36.6■■■■□ 3.45
TRAF3IP1-203ENST00000409739 RALYLQ86SE5 291 aaKnown RBP36.6■■■■□ 3.45
TRAF3IP1-203ENST00000409739 MROH8Q9H579 483 aa36.6■■■■□ 3.45
TRAF3IP1-203ENST00000409739 ZBED4O75132 1171 aa36.59■■■■□ 3.45
TRAF3IP1-203ENST00000409739 SLC25A27O95847 323 aa36.59■■■■□ 3.45
TRAF3IP1-203ENST00000409739 CREB3L3Q68CJ9 461 aa36.59■■■■□ 3.45
TRAF3IP1-203ENST00000409739 FRMPD2Q68DX3 1309 aaPredicted RBP36.59■■■■□ 3.45
TRAF3IP1-203ENST00000409739 MYH6P13533 1939 aa36.58■■■■□ 3.45
TRAF3IP1-203ENST00000409739 MYCP01106 439 aaPredicted RBP36.58■■■■□ 3.45
TRAF3IP1-203ENST00000409739 SNHG28P0DPA3 235 aa36.58■■■■□ 3.45
TRAF3IP1-203ENST00000409739 RGS2P41220 211 aa36.58■■■■□ 3.45
TRAF3IP1-203ENST00000409739 MAP2K5Q13163 448 aa36.58■■■■□ 3.45
TRAF3IP1-203ENST00000409739 SEC23AQ15436 765 aa36.58■■■■□ 3.45
TRAF3IP1-203ENST00000409739 PNMA1Q8ND90 353 aa36.58■■■■□ 3.45
TRAF3IP1-203ENST00000409739 APBA2Q99767 749 aa36.58■■■■□ 3.45
TRAF3IP1-203ENST00000409739 TEX13BQ9BXU2 312 aa36.58■■■■□ 3.45
TRAF3IP1-203ENST00000409739 KAT14Q9H8E8 782 aa36.58■■■■□ 3.45
TRAF3IP1-203ENST00000409739 BIN2Q9UBW5 565 aaPredicted RBP36.58■■■■□ 3.45
TRAF3IP1-203ENST00000409739 ATP2A1O14983 1001 aa36.57■■■■□ 3.44
TRAF3IP1-203ENST00000409739 INHAP05111 366 aa36.57■■■■□ 3.44
TRAF3IP1-203ENST00000409739 XRCC5P13010 732 aaKnown RBP36.57■■■■□ 3.44
TRAF3IP1-203ENST00000409739 MB21D2Q8IYB1 491 aaPredicted RBP36.57■■■■□ 3.44
TRAF3IP1-203ENST00000409739 CTDP1Q9Y5B0 961 aaPredicted RBP36.57■■■■□ 3.44
TRAF3IP1-203ENST00000409739 FDX1P10109 184 aa36.56■■■■□ 3.44
TRAF3IP1-203ENST00000409739 ZNF543Q08ER8 600 aa36.56■■■■□ 3.44
TRAF3IP1-203ENST00000409739 MTFR1Q15390 333 aa36.56■■■■□ 3.44
TRAF3IP1-203ENST00000409739 SNRNP48Q6IEG0 339 aaKnown RBP36.56■■■■□ 3.44
TRAF3IP1-203ENST00000409739 TTBK2Q6IQ55 1244 aa36.56■■■■□ 3.44
TRAF3IP1-203ENST00000409739 TRIB2Q92519 343 aa36.56■■■■□ 3.44
TRAF3IP1-203ENST00000409739 PRR12Q9ULL5 1215 aa36.56■■■■□ 3.44
TRAF3IP1-203ENST00000409739 STRNO43815 780 aa36.55■■■■□ 3.44
TRAF3IP1-203ENST00000409739 HMGCRP04035 888 aa36.55■■■■□ 3.44
TRAF3IP1-203ENST00000409739 COPB2P35606 906 aa36.55■■■■□ 3.44
TRAF3IP1-203ENST00000409739 UBXN2AP68543 259 aa36.55■■■■□ 3.44
TRAF3IP1-203ENST00000409739 IFIT1BQ5T764 474 aaKnown RBP36.55■■■■□ 3.44
TRAF3IP1-203ENST00000409739 BTNL9Q6UXG8 535 aa36.55■■■■□ 3.44
TRAF3IP1-203ENST00000409739 CPXCR1Q8N123 301 aa36.55■■■■□ 3.44
TRAF3IP1-203ENST00000409739 RAVER2Q9HCJ3 691 aaKnown RBP36.55■■■■□ 3.44
TRAF3IP1-203ENST00000409739 GPCPD1Q9NPB8 672 aa36.55■■■■□ 3.44
TRAF3IP1-203ENST00000409739 ADORA2AP29274 412 aa36.54■■■■□ 3.44
TRAF3IP1-203ENST00000409739 OAZ1P54368 228 aa36.54■■■■□ 3.44
TRAF3IP1-203ENST00000409739 RIPK3Q9Y572 518 aa36.54■■■■□ 3.44
TRAF3IP1-203ENST00000409739 POTEFA5A3E0 1075 aa36.53■■■■□ 3.44
TRAF3IP1-203ENST00000409739 ANTXR2P58335 489 aa36.53■■■■□ 3.44
TRAF3IP1-203ENST00000409739 HOXC6P09630 235 aa36.52■■■■□ 3.44
TRAF3IP1-203ENST00000409739 SLC16A2P36021 539 aa36.52■■■■□ 3.44
TRAF3IP1-203ENST00000409739 CCL14Q16627 93 aa36.52■■■■□ 3.44
TRAF3IP1-203ENST00000409739 CHST3Q7LGC8 479 aa36.52■■■■□ 3.44
TRAF3IP1-203ENST00000409739 ABRAQ8N0Z2 381 aa36.52■■■■□ 3.44
TRAF3IP1-203ENST00000409739 IFIT3O14879 490 aaKnown RBP36.51■■■■□ 3.44
TRAF3IP1-203ENST00000409739 CCL5P13501 91 aa36.51■■■■□ 3.44
TRAF3IP1-203ENST00000409739 ZKSCAN1P17029 563 aaPredicted RBP36.51■■■■□ 3.44
TRAF3IP1-203ENST00000409739 SYDE2Q5VT97 1194 aa36.51■■■■□ 3.44
TRAF3IP1-203ENST00000409739 RNF20Q5VTR2 975 aa36.51■■■■□ 3.44
TRAF3IP1-203ENST00000409739 TRMT44Q8IYL2 757 aaKnown RBP36.51■■■■□ 3.44
TRAF3IP1-203ENST00000409739 TMEM106CQ9BVX2 250 aa36.51■■■■□ 3.44
TRAF3IP1-203ENST00000409739 ZNF536O15090 1300 aa36.51■■■■□ 3.43
TRAF3IP1-203ENST00000409739 FCER1AP12319 257 aa36.5■■■■□ 3.43
TRAF3IP1-203ENST00000409739 SNAP25P60880 206 aa36.5■■■■□ 3.43
TRAF3IP1-203ENST00000409739 TRIM32Q13049 653 aa36.5■■■■□ 3.43
TRAF3IP1-203ENST00000409739 GPATCH4Q5T3I0 446 aaKnown RBP36.5■■■■□ 3.43
TRAF3IP1-203ENST00000409739 NPLOC4Q8TAT6 608 aa36.5■■■■□ 3.43
TRAF3IP1-203ENST00000409739 COL9A3Q14050 684 aaPredicted RBP36.49■■■■□ 3.43
TRAF3IP1-203ENST00000409739 SART3Q15020 963 aaKnown RBP36.49■■■■□ 3.43
TRAF3IP1-203ENST00000409739 MMP19Q99542 508 aa36.49■■■■□ 3.43
TRAF3IP1-203ENST00000409739 UNC93B1Q9H1C4 597 aa36.49■■■■□ 3.43
TRAF3IP1-203ENST00000409739 RANBP17Q9H2T7 1088 aaKnown RBP36.49■■■■□ 3.43
TRAF3IP1-203ENST00000409739 FRMPD3Q5JV73 1810 aa36.48■■■■□ 3.43
TRAF3IP1-203ENST00000409739 ERICH2A1L162 156 aa36.48■■■■□ 3.43
TRAF3IP1-203ENST00000409739 COBLO75128 1261 aa36.48■■■■□ 3.43
TRAF3IP1-203ENST00000409739 GOLGA8HP0CJ92 632 aa36.48■■■■□ 3.43
TRAF3IP1-203ENST00000409739 SLC4A3P48751 1232 aa36.48■■■■□ 3.43
TRAF3IP1-203ENST00000409739 RGS19P49795 217 aa36.48■■■■□ 3.43
TRAF3IP1-203ENST00000409739 DPP9Q86TI2 863 aa36.48■■■■□ 3.43
TRAF3IP1-203ENST00000409739 SENP2Q9HC62 589 aa36.48■■■■□ 3.43
TRAF3IP1-203ENST00000409739 CCDC174Q6PII3 467 aa36.47■■■■□ 3.43
TRAF3IP1-203ENST00000409739 FLRT1Q9NZU1 646 aa36.47■■■■□ 3.43
TRAF3IP1-203ENST00000409739 WTAPQ15007 396 aa36.46■■■■□ 3.43
TRAF3IP1-203ENST00000409739 ASPRV1Q53RT3 343 aa36.46■■■■□ 3.43
TRAF3IP1-203ENST00000409739 TMEM67Q5HYA8 995 aa36.46■■■■□ 3.43
TRAF3IP1-203ENST00000409739 IGDCC4Q8TDY8 1250 aa36.46■■■■□ 3.43
TRAF3IP1-203ENST00000409739 AGBL1Q96MI9 1066 aa36.46■■■■□ 3.43
TRAF3IP1-203ENST00000409739 RNF208Q9H0X6 261 aa36.46■■■■□ 3.43
TRAF3IP1-203ENST00000409739 KCTD2Q14681 263 aa36.45■■■■□ 3.43
TRAF3IP1-203ENST00000409739 DHX30Q7L2E3 1194 aaKnown RBP eCLIP36.45■■■■□ 3.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms