RNA–Protein interactions for RNA: ENST00000409161.5

SHANK2-203, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 9,208 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-203ENST00000409161 PPP2R2CQ9Y2T4 447 aa13.27□□□□□ -0.28
SHANK2-203ENST00000409161 ATF7P17544 494 aaPredicted RBP13.27□□□□□ -0.28
SHANK2-203ENST00000409161 ETF1P62495 437 aaKnown RBP13.27□□□□□ -0.28
SHANK2-203ENST00000409161 EIF3DO15371 548 aaKnown RBP eCLIP13.27□□□□□ -0.292e-6■□□□□ 11
SHANK2-203ENST00000409161 KIF1CO43896 1103 aaKnown RBP13.27□□□□□ -0.29
SHANK2-203ENST00000409161 MCF2L2Q86YR7 1114 aa13.27□□□□□ -0.29
SHANK2-203ENST00000409161 XPO4Q9C0E2 1151 aaKnown RBP13.27□□□□□ -0.29
SHANK2-203ENST00000409161 WDR7Q9Y4E6 1490 aa13.27□□□□□ -0.29
SHANK2-203ENST00000409161 BPIFB4P59827 614 aa13.27□□□□□ -0.29
SHANK2-203ENST00000409161 IFT88Q13099 833 aa13.27□□□□□ -0.29
SHANK2-203ENST00000409161 TMED1Q13445 227 aa13.27□□□□□ -0.29
SHANK2-203ENST00000409161 SNX29Q8TEQ0 813 aa13.27□□□□□ -0.29
SHANK2-203ENST00000409161 POLR3CQ9BUI4 534 aaPredicted RBP13.27□□□□□ -0.29
SHANK2-203ENST00000409161 ZC3H12CQ9C0D7 883 aaKnown RBP13.27□□□□□ -0.29
SHANK2-203ENST00000409161 UPF3AQ9H1J1 476 aaKnown RBP13.27□□□□□ -0.29
SHANK2-203ENST00000409161 NBPF10Q6P3W6 841 aaKnown RBP13.27□□□□□ -0.29
SHANK2-203ENST00000409161 CALR3Q96L12 384 aaKnown RBP13.27□□□□□ -0.29
SHANK2-203ENST00000409161 POTEB3A0JP26 581 aa13.26□□□□□ -0.29
SHANK2-203ENST00000409161 PPP2R5CQ13362 524 aa13.26□□□□□ -0.29
SHANK2-203ENST00000409161 DYNC1I2Q13409 638 aaKnown RBP13.26□□□□□ -0.29
SHANK2-203ENST00000409161 POTEBQ6S5H4 581 aa13.26□□□□□ -0.29
SHANK2-203ENST00000409161 TPTE2Q6XPS3 522 aa13.26□□□□□ -0.29
SHANK2-203ENST00000409161 CEP19Q96LK0 163 aa13.26□□□□□ -0.29
SHANK2-203ENST00000409161 LSM14BQ9BX40 385 aaKnown RBP13.26□□□□□ -0.29
SHANK2-203ENST00000409161 CHST3Q7LGC8 479 aa13.26□□□□□ -0.29
SHANK2-203ENST00000409161 RIMS2Q9UQ26 1411 aa13.26□□□□□ -0.29
SHANK2-203ENST00000409161 ZBTB24O43167 697 aaPredicted RBP13.26□□□□□ -0.29
SHANK2-203ENST00000409161 PLIN2Q99541 437 aa13.26□□□□□ -0.29
SHANK2-203ENST00000409161 AZI2Q9H6S1 392 aa13.26□□□□□ -0.29
SHANK2-203ENST00000409161 PDE11AQ9HCR9 933 aa13.26□□□□□ -0.29
SHANK2-203ENST00000409161 F8W8V4 182 aa13.26□□□□□ -0.29
SHANK2-203ENST00000409161 GNGT2O14610 69 aa13.26□□□□□ -0.29
SHANK2-203ENST00000409161 IFNB1P01574 187 aa13.26□□□□□ -0.29
SHANK2-203ENST00000409161 ECE1P42892 770 aa13.26□□□□□ -0.29
SHANK2-203ENST00000409161 CNPY4Q8N129 248 aa13.26□□□□□ -0.29
SHANK2-203ENST00000409161 TTC25Q96NG3 672 aa13.26□□□□□ -0.29
SHANK2-203ENST00000409161 TSC22D3Q99576 134 aa13.26□□□□□ -0.29
SHANK2-203ENST00000409161 TAB2Q9NYJ8 693 aa13.26□□□□□ -0.29
SHANK2-203ENST00000409161 MID2Q9UJV3 735 aa13.26□□□□□ -0.29
SHANK2-203ENST00000409161 TTLL3Q9Y4R7 772 aa13.26□□□□□ -0.29
SHANK2-203ENST00000409161 VGLL3A8MV65 326 aa13.26□□□□□ -0.29
SHANK2-203ENST00000409161 DCTN3O75935 186 aa13.26□□□□□ -0.29
SHANK2-203ENST00000409161 TTC1Q99614 292 aa13.26□□□□□ -0.29
SHANK2-203ENST00000409161 LRWD1Q9UFC0 647 aa13.26□□□□□ -0.29
SHANK2-203ENST00000409161 M0QZ92 97 aa13.26□□□□□ -0.29
SHANK2-203ENST00000409161 HDAC11Q96DB2 347 aa13.26□□□□□ -0.29
SHANK2-203ENST00000409161 PSMB7Q99436 277 aa13.26□□□□□ -0.29
SHANK2-203ENST00000409161 TM6SF1Q9BZW5 370 aa13.26□□□□□ -0.29
SHANK2-203ENST00000409161 ANAPC5Q9UJX4 755 aa13.26□□□□□ -0.29
SHANK2-203ENST00000409161 CCDC151A5D8V7 595 aa13.26□□□□□ -0.29
SHANK2-203ENST00000409161 COPS6Q7L5N1 327 aa13.26□□□□□ -0.29
SHANK2-203ENST00000409161 WAPLQ7Z5K2 1190 aa13.26□□□□□ -0.29
SHANK2-203ENST00000409161 TMCO5AQ8N6Q1 288 aa13.26□□□□□ -0.29
SHANK2-203ENST00000409161 APPBP2Q92624 585 aa13.26□□□□□ -0.29
SHANK2-203ENST00000409161 CUEDC2Q9H467 287 aa13.26□□□□□ -0.29
SHANK2-203ENST00000409161 AOC3Q16853 763 aa13.25□□□□□ -0.29
SHANK2-203ENST00000409161 SKAP1Q86WV1 359 aa13.25□□□□□ -0.29
SHANK2-203ENST00000409161 N4BP2L2Q92802 583 aaPredicted RBP13.25□□□□□ -0.29
SHANK2-203ENST00000409161 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.25□□□□□ -0.29
SHANK2-203ENST00000409161 RASGRF2O14827 1237 aa13.25□□□□□ -0.29
SHANK2-203ENST00000409161 CCT5P48643 541 aa13.25□□□□□ -0.29
SHANK2-203ENST00000409161 TRIM60Q495X7 471 aa13.25□□□□□ -0.29
SHANK2-203ENST00000409161 GRAMD4Q6IC98 578 aa13.25□□□□□ -0.29
SHANK2-203ENST00000409161 MAP7D3Q8IWC1 876 aa13.25□□□□□ -0.29
SHANK2-203ENST00000409161 NSFP46459 744 aaKnown RBP13.25□□□□□ -0.29
SHANK2-203ENST00000409161 NOP14P78316 857 aaKnown RBP13.25□□□□□ -0.29
SHANK2-203ENST00000409161 CUL1Q13616 776 aa13.25□□□□□ -0.29
SHANK2-203ENST00000409161 TEX12Q9BXU0 123 aa13.25□□□□□ -0.29
SHANK2-203ENST00000409161 FAM207AQ9NSI2 230 aaPredicted RBP13.25□□□□□ -0.29
SHANK2-203ENST00000409161 UHRF1BP1Q6BDS2 1440 aa13.25□□□□□ -0.29
SHANK2-203ENST00000409161 INSRP06213 1382 aa13.25□□□□□ -0.29
SHANK2-203ENST00000409161 CREB3O43889 395 aa13.25□□□□□ -0.29
SHANK2-203ENST00000409161 FAM135BQ49AJ0 1406 aa13.25□□□□□ -0.29
SHANK2-203ENST00000409161 ARMCX3Q9UH62 379 aaPredicted RBP13.25□□□□□ -0.29
SHANK2-203ENST00000409161 DAAM1Q9Y4D1 1078 aa13.25□□□□□ -0.29
SHANK2-203ENST00000409161 ABCA5Q8WWZ7 1642 aa13.25□□□□□ -0.29
SHANK2-203ENST00000409161 MAST1Q9Y2H9 1570 aa13.25□□□□□ -0.29
SHANK2-203ENST00000409161 GPC4O75487 556 aa13.24□□□□□ -0.29
SHANK2-203ENST00000409161 PRPF38AQ8NAV1 312 aaKnown RBP13.24□□□□□ -0.29
SHANK2-203ENST00000409161 HARSP12081 509 aaKnown RBP13.24□□□□□ -0.29
SHANK2-203ENST00000409161 GFAPP14136 432 aa13.24□□□□□ -0.29
SHANK2-203ENST00000409161 ZFXP17010 805 aaPredicted RBP13.24□□□□□ -0.29
SHANK2-203ENST00000409161 EEF1B2P24534 225 aaKnown RBP13.24□□□□□ -0.29
SHANK2-203ENST00000409161 ESYT2A0FGR8 921 aa13.24□□□□□ -0.29
SHANK2-203ENST00000409161 TNNI1P19237 187 aa13.24□□□□□ -0.29
SHANK2-203ENST00000409161 C16orf87Q6PH81 154 aa13.24□□□□□ -0.29
SHANK2-203ENST00000409161 MYOCDQ8IZQ8 938 aa13.24□□□□□ -0.29
SHANK2-203ENST00000409161 LAD1O00515 517 aa13.24□□□□□ -0.29
SHANK2-203ENST00000409161 ATG16L1Q676U5 607 aa13.24□□□□□ -0.29
SHANK2-203ENST00000409161 GDAP1L1Q96MZ0 367 aa13.24□□□□□ -0.29
SHANK2-203ENST00000409161 RRAGDQ9NQL2 400 aaPredicted RBP13.24□□□□□ -0.29
SHANK2-203ENST00000409161 PLCH2O75038 1416 aa13.24□□□□□ -0.29
SHANK2-203ENST00000409161 IPO5O00410 1097 aaKnown RBP13.24□□□□□ -0.29
SHANK2-203ENST00000409161 OATP04181 439 aa13.24□□□□□ -0.29
SHANK2-203ENST00000409161 GPHNQ9NQX3 736 aaPredicted RBP13.24□□□□□ -0.29
SHANK2-203ENST00000409161 A0A1B0GW55 424 aa13.24□□□□□ -0.29
SHANK2-203ENST00000409161 DUX4L2P0CJ85 424 aa13.24□□□□□ -0.29
SHANK2-203ENST00000409161 DUX4L3P0CJ86 424 aa13.24□□□□□ -0.29
SHANK2-203ENST00000409161 DUX4L4P0CJ87 422 aa13.24□□□□□ -0.29
SHANK2-203ENST00000409161 DUX4L5P0CJ88 424 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms