RNA–Protein interactions for RNA: ENST00000409141.5

PDLIM2-206, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-206ENST00000409141 CCDC96Q2M329 555 aa21.1■□□□□ 0.97
PDLIM2-206ENST00000409141 RIOX2Q8IUF8 465 aa21.1■□□□□ 0.97
PDLIM2-206ENST00000409141 TRMT44Q8IYL2 757 aaKnown RBP21.1■□□□□ 0.97
PDLIM2-206ENST00000409141 ZSCAN10Q96SZ4 725 aaPredicted RBP21.1■□□□□ 0.97
PDLIM2-206ENST00000409141 RNF208Q9H0X6 261 aa21.1■□□□□ 0.97
PDLIM2-206ENST00000409141 ZNF214Q9UL59 606 aaPredicted RBP21.1■□□□□ 0.97
PDLIM2-206ENST00000409141 RBM8AQ9Y5S9 174 aaKnown RBP21.1■□□□□ 0.97
PDLIM2-206ENST00000409141 A0A0G2JMZ2 1700 aa21.1■□□□□ 0.97
PDLIM2-206ENST00000409141 PARP14Q460N5 1801 aa21.09■□□□□ 0.97
PDLIM2-206ENST00000409141 CDC45O75419 566 aa21.09■□□□□ 0.97
PDLIM2-206ENST00000409141 MLLT1Q03111 559 aaPredicted RBP21.09■□□□□ 0.97
PDLIM2-206ENST00000409141 RASGRP2Q7LDG7 609 aa21.09■□□□□ 0.97
PDLIM2-206ENST00000409141 CPXCR1Q8N123 301 aa21.09■□□□□ 0.97
PDLIM2-206ENST00000409141 TRIB2Q92519 343 aa21.09■□□□□ 0.97
PDLIM2-206ENST00000409141 APBA2Q99767 749 aa21.09■□□□□ 0.97
PDLIM2-206ENST00000409141 LSG1Q9H089 658 aaKnown RBP21.09■□□□□ 0.97
PDLIM2-206ENST00000409141 UNC93B1Q9H1C4 597 aa21.09■□□□□ 0.97
PDLIM2-206ENST00000409141 SLC38A10Q9HBR0 1119 aa21.09■□□□□ 0.97
PDLIM2-206ENST00000409141 ANO2Q9NQ90 1003 aa21.09■□□□□ 0.97
PDLIM2-206ENST00000409141 PLA2G6O60733 806 aa21.08■□□□□ 0.97
PDLIM2-206ENST00000409141 FDX1P10109 184 aa21.08■□□□□ 0.97
PDLIM2-206ENST00000409141 ZKSCAN1P17029 563 aaPredicted RBP21.08■□□□□ 0.97
PDLIM2-206ENST00000409141 EN2P19622 333 aaPredicted RBP21.08■□□□□ 0.97
PDLIM2-206ENST00000409141 SLC4A3P48751 1232 aa21.08■□□□□ 0.97
PDLIM2-206ENST00000409141 SNRNP48Q6IEG0 339 aaKnown RBP21.08■□□□□ 0.97
PDLIM2-206ENST00000409141 DPP9Q86TI2 863 aa21.08■□□□□ 0.97
PDLIM2-206ENST00000409141 UBAC1Q9BSL1 405 aa21.08■□□□□ 0.97
PDLIM2-206ENST00000409141 TEX13BQ9BXU2 312 aa21.08■□□□□ 0.97
PDLIM2-206ENST00000409141 PLXNB2O15031 1838 aa21.08■□□□□ 0.97
PDLIM2-206ENST00000409141 E7EWF7 191 aa21.07■□□□□ 0.96
PDLIM2-206ENST00000409141 ATP2A1O14983 1001 aa21.07■□□□□ 0.96
PDLIM2-206ENST00000409141 FCER1AP12319 257 aa21.07■□□□□ 0.96
PDLIM2-206ENST00000409141 ADORA2AP29274 412 aa21.07■□□□□ 0.96
PDLIM2-206ENST00000409141 COPB2P35606 906 aa21.07■□□□□ 0.96
PDLIM2-206ENST00000409141 CCL14Q16627 93 aa21.07■□□□□ 0.96
PDLIM2-206ENST00000409141 RAVER2Q9HCJ3 691 aaKnown RBP21.07■□□□□ 0.96
PDLIM2-206ENST00000409141 TRIM32Q13049 653 aa21.07■□□□□ 0.96
PDLIM2-206ENST00000409141 ABRAQ8N0Z2 381 aa21.07■□□□□ 0.96
PDLIM2-206ENST00000409141 ENAHQ8N8S7 591 aaPredicted RBP21.07■□□□□ 0.96
PDLIM2-206ENST00000409141 ANKS1AQ92625 1134 aa21.07■□□□□ 0.96
PDLIM2-206ENST00000409141 KAT14Q9H8E8 782 aa21.07■□□□□ 0.96
PDLIM2-206ENST00000409141 GPCPD1Q9NPB8 672 aa21.07■□□□□ 0.96
PDLIM2-206ENST00000409141 TAF6LQ9Y6J9 622 aa21.07■□□□□ 0.96
PDLIM2-206ENST00000409141 TNKSO95271 1327 aa21.06■□□□□ 0.96
PDLIM2-206ENST00000409141 FRMPD2Q68DX3 1309 aaPredicted RBP21.06■□□□□ 0.96
PDLIM2-206ENST00000409141 GJB1P08034 283 aa21.06■□□□□ 0.96
PDLIM2-206ENST00000409141 HOXC6P09630 235 aa21.06■□□□□ 0.96
PDLIM2-206ENST00000409141 PDHBP11177 359 aa21.06■□□□□ 0.96
PDLIM2-206ENST00000409141 OAZ1P54368 228 aa21.06■□□□□ 0.96
PDLIM2-206ENST00000409141 KCTD2Q14681 263 aa21.06■□□□□ 0.96
PDLIM2-206ENST00000409141 CYB5R4Q7L1T6 521 aa21.06■□□□□ 0.96
PDLIM2-206ENST00000409141 RALYLQ86SE5 291 aaKnown RBP21.06■□□□□ 0.96
PDLIM2-206ENST00000409141 NCOA7Q8NI08 942 aa21.06■□□□□ 0.96
PDLIM2-206ENST00000409141 MMP19Q99542 508 aa21.06■□□□□ 0.96
PDLIM2-206ENST00000409141 SLC5A4Q9NY91 659 aa21.06■□□□□ 0.96
PDLIM2-206ENST00000409141 PRR12Q9ULL5 1215 aa21.06■□□□□ 0.96
PDLIM2-206ENST00000409141 COL11A1P12107 1806 aaPredicted RBP21.05■□□□□ 0.96
PDLIM2-206ENST00000409141 SLC16A2P36021 539 aa21.05■□□□□ 0.96
PDLIM2-206ENST00000409141 TTBK2Q6IQ55 1244 aa21.05■□□□□ 0.96
PDLIM2-206ENST00000409141 PNMA1Q8ND90 353 aa21.05■□□□□ 0.96
PDLIM2-206ENST00000409141 NPLOC4Q8TAT6 608 aa21.05■□□□□ 0.96
PDLIM2-206ENST00000409141 RIPK3Q9Y572 518 aa21.05■□□□□ 0.96
PDLIM2-206ENST00000409141 CENPFP49454 3210 aa21.04■□□□□ 0.96
PDLIM2-206ENST00000409141 COBLO75128 1261 aa21.04■□□□□ 0.96
PDLIM2-206ENST00000409141 STOX1Q6ZVD7 989 aa21.04■□□□□ 0.96
PDLIM2-206ENST00000409141 HMX1Q9NP08 348 aaPredicted RBP21.04■□□□□ 0.96
PDLIM2-206ENST00000409141 FLRT1Q9NZU1 646 aa21.04■□□□□ 0.96
PDLIM2-206ENST00000409141 RPTORQ8N122 1335 aa21.04■□□□□ 0.96
PDLIM2-206ENST00000409141 SNHG28P0DPA3 235 aa21.03■□□□□ 0.96
PDLIM2-206ENST00000409141 PRKAR2AP13861 404 aaKnown RBP21.03■□□□□ 0.96
PDLIM2-206ENST00000409141 SNAP25P60880 206 aa21.03■□□□□ 0.96
PDLIM2-206ENST00000409141 ZNF543Q08ER8 600 aa21.03■□□□□ 0.96
PDLIM2-206ENST00000409141 IFIT1BQ5T764 474 aaKnown RBP21.03■□□□□ 0.96
PDLIM2-206ENST00000409141 MFSD14CQ5VZR4 134 aa21.03■□□□□ 0.96
PDLIM2-206ENST00000409141 CCDC174Q6PII3 467 aa21.03■□□□□ 0.96
PDLIM2-206ENST00000409141 BTNL9Q6UXG8 535 aa21.03■□□□□ 0.96
PDLIM2-206ENST00000409141 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.03■□□□□ 0.96
PDLIM2-206ENST00000409141 SLC27A2O14975 620 aa21.02■□□□□ 0.96
PDLIM2-206ENST00000409141 GJA8P48165 433 aa21.02■□□□□ 0.96
PDLIM2-206ENST00000409141 CACNB2Q08289 660 aaPredicted RBP21.02■□□□□ 0.96
PDLIM2-206ENST00000409141 NECTIN1Q15223 517 aa21.02■□□□□ 0.96
PDLIM2-206ENST00000409141 SYDE2Q5VT97 1194 aa21.02■□□□□ 0.96
PDLIM2-206ENST00000409141 U2AF1L4Q8WU68 220 aaKnown RBP21.02■□□□□ 0.96
PDLIM2-206ENST00000409141 AGBL1Q96MI9 1066 aa21.02■□□□□ 0.96
PDLIM2-206ENST00000409141 DEFB118Q96PH6 123 aa21.02■□□□□ 0.96
PDLIM2-206ENST00000409141 PAK6Q9NQU5 681 aaPredicted RBP21.02■□□□□ 0.96
PDLIM2-206ENST00000409141 ERICH2A1L162 156 aa21.01■□□□□ 0.95
PDLIM2-206ENST00000409141 IFIT3O14879 490 aaKnown RBP21.01■□□□□ 0.95
PDLIM2-206ENST00000409141 SGPL1O95470 568 aa21.01■□□□□ 0.95
PDLIM2-206ENST00000409141 PGK2P07205 417 aa21.01■□□□□ 0.95
PDLIM2-206ENST00000409141 GOLGA8HP0CJ92 632 aa21.01■□□□□ 0.95
PDLIM2-206ENST00000409141 SEC23AQ15436 765 aa21.01■□□□□ 0.95
PDLIM2-206ENST00000409141 GPATCH4Q5T3I0 446 aaKnown RBP21.01■□□□□ 0.95
PDLIM2-206ENST00000409141 MAP3K21Q5TCX8 1036 aa21.01■□□□□ 0.95
PDLIM2-206ENST00000409141 CREB3L3Q68CJ9 461 aa21.01■□□□□ 0.95
PDLIM2-206ENST00000409141 CHST3Q7LGC8 479 aa21.01■□□□□ 0.95
PDLIM2-206ENST00000409141 CHST13Q8NET6 341 aa21.01■□□□□ 0.95
PDLIM2-206ENST00000409141 DDX11Q96FC9 970 aa21.01■□□□□ 0.95
PDLIM2-206ENST00000409141 HOMER2Q9NSB8 354 aa21.01■□□□□ 0.95
PDLIM2-206ENST00000409141 FBXO40Q9UH90 709 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms