RNA–Protein interactions for RNA: ENST00000408454.1

SNORD88B-201, Transcript of small nucleolar RNA, C/D box 88B, humanhuman

BASIC

Gene SNORD88B, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88B-201ENST00000408454 LOC102724159A0A0B4J2E5 919 aa15.18■□□□□ 0.02
SNORD88B-201ENST00000408454 IGKV6D-41A0A0C4DH26 115 aa15.18■□□□□ 0.02
SNORD88B-201ENST00000408454 RANBP6O60518 1105 aaKnown RBP15.18■□□□□ 0.02
SNORD88B-201ENST00000408454 FXR1P51114 621 aaKnown RBP eCLIP15.18■□□□□ 0.02
SNORD88B-201ENST00000408454 PWP2Q15269 919 aaKnown RBP15.18■□□□□ 0.02
SNORD88B-201ENST00000408454 SMC5Q8IY18 1101 aa15.18■□□□□ 0.02
SNORD88B-201ENST00000408454 NPLOC4Q8TAT6 608 aa15.18■□□□□ 0.02
SNORD88B-201ENST00000408454 DCAF4Q8WV16 495 aa15.18■□□□□ 0.02
SNORD88B-201ENST00000408454 STAG1Q8WVM7 1258 aa15.18■□□□□ 0.02
SNORD88B-201ENST00000408454 YTHDC1Q96MU7 727 aaKnown RBP15.18■□□□□ 0.02
SNORD88B-201ENST00000408454 TTC14Q96N46 770 aa15.18■□□□□ 0.02
SNORD88B-201ENST00000408454 SEZ6LQ9BYH1 1024 aa15.18■□□□□ 0.02
SNORD88B-201ENST00000408454 MAF1Q9H063 256 aa15.18■□□□□ 0.02
SNORD88B-201ENST00000408454 ACAD9Q9H845 621 aa15.18■□□□□ 0.02
SNORD88B-201ENST00000408454 SLC38A10Q9HBR0 1119 aa15.18■□□□□ 0.02
SNORD88B-201ENST00000408454 XPNPEP3Q9NQH7 507 aa15.18■□□□□ 0.02
SNORD88B-201ENST00000408454 RBM27Q9P2N5 1060 aaKnown RBP15.18■□□□□ 0.02
SNORD88B-201ENST00000408454 FAM184BQ9ULE4 1060 aa15.18■□□□□ 0.02
SNORD88B-201ENST00000408454 MROH7Q68CQ1 1323 aa15.17■□□□□ 0.02
SNORD88B-201ENST00000408454 ASB14A6NK59 587 aa15.17■□□□□ 0.02
SNORD88B-201ENST00000408454 PRDM1O75626 825 aa15.17■□□□□ 0.02
SNORD88B-201ENST00000408454 SLFNL1Q499Z3 407 aa15.17■□□□□ 0.02
SNORD88B-201ENST00000408454 CCDC174Q6PII3 467 aa15.17■□□□□ 0.02
SNORD88B-201ENST00000408454 MFSD6Q6ZSS7 791 aa15.17■□□□□ 0.02
SNORD88B-201ENST00000408454 CHD1LQ86WJ1 897 aa15.17■□□□□ 0.02
SNORD88B-201ENST00000408454 IQCA1Q86XH1 822 aa15.17■□□□□ 0.02
SNORD88B-201ENST00000408454 CLEC10AQ8IUN9 316 aa15.17■□□□□ 0.02
SNORD88B-201ENST00000408454 CPXCR1Q8N123 301 aa15.17■□□□□ 0.02
SNORD88B-201ENST00000408454 STK11IPQ8N1F8 1099 aa15.17■□□□□ 0.02
SNORD88B-201ENST00000408454 PCSK9Q8NBP7 692 aaKnown RBP15.17■□□□□ 0.02
SNORD88B-201ENST00000408454 DIS3LQ8TF46 1054 aaKnown RBP15.17■□□□□ 0.02
SNORD88B-201ENST00000408454 ESR2Q92731 530 aa15.17■□□□□ 0.02
SNORD88B-201ENST00000408454 RILPL2Q969X0 211 aa15.17■□□□□ 0.02
SNORD88B-201ENST00000408454 TSEN34Q9BSV6 310 aaKnown RBP15.17■□□□□ 0.02
SNORD88B-201ENST00000408454 UBE2OQ9C0C9 1292 aaKnown RBP15.17■□□□□ 0.02
SNORD88B-201ENST00000408454 ABHD16BQ9H3Z7 469 aa15.17■□□□□ 0.02
SNORD88B-201ENST00000408454 OSBPL3Q9H4L5 887 aa15.17■□□□□ 0.02
SNORD88B-201ENST00000408454 ADD3Q9UEY8 706 aaKnown RBP15.17■□□□□ 0.02
SNORD88B-201ENST00000408454 CCDC171Q6TFL3 1326 aa15.17■□□□□ 0.02
SNORD88B-201ENST00000408454 SALL3Q9BXA9 1300 aa15.17■□□□□ 0.02
SNORD88B-201ENST00000408454 DOCK3Q8IZD9 2030 aa15.16■□□□□ 0.02
SNORD88B-201ENST00000408454 MOXD2PA6NHM9 499 aa15.16■□□□□ 0.02
SNORD88B-201ENST00000408454 TMEM232C9JQI7 657 aa15.16■□□□□ 0.02
SNORD88B-201ENST00000408454 PEX10O60683 326 aa15.16■□□□□ 0.02
SNORD88B-201ENST00000408454 TOP1P11387 765 aaKnown RBP15.16■□□□□ 0.02
SNORD88B-201ENST00000408454 TRAF1Q13077 416 aa15.16■□□□□ 0.02
SNORD88B-201ENST00000408454 C1orf53Q5VUE5 145 aa15.16■□□□□ 0.02
SNORD88B-201ENST00000408454 MAMDC4Q6UXC1 1216 aa15.16■□□□□ 0.02
SNORD88B-201ENST00000408454 TDHQ8IZJ6 230 aa15.16■□□□□ 0.02
SNORD88B-201ENST00000408454 RUFY2Q8WXA3 655 aa15.16■□□□□ 0.02
SNORD88B-201ENST00000408454 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.16■□□□□ 0.02
SNORD88B-201ENST00000408454 LNPKQ9C0E8 428 aa15.16■□□□□ 0.02
SNORD88B-201ENST00000408454 TCP11L1Q9NUJ3 509 aa15.16■□□□□ 0.02
SNORD88B-201ENST00000408454 FBXO28Q9NVF7 368 aa15.16■□□□□ 0.02
SNORD88B-201ENST00000408454 ZNF213O14771 459 aa15.15■□□□□ 0.02
SNORD88B-201ENST00000408454 ZEB2O60315 1214 aa15.15■□□□□ 0.02
SNORD88B-201ENST00000408454 COBLO75128 1261 aa15.15■□□□□ 0.02
SNORD88B-201ENST00000408454 MYCNP04198 464 aaPredicted RBP15.15■□□□□ 0.02
SNORD88B-201ENST00000408454 CCDC96Q2M329 555 aa15.15■□□□□ 0.02
SNORD88B-201ENST00000408454 ZNF792Q3KQV3 632 aa15.15■□□□□ 0.02
SNORD88B-201ENST00000408454 POTEEQ6S8J3 1075 aa15.15■□□□□ 0.02
SNORD88B-201ENST00000408454 LRRC47Q8N1G4 583 aaKnown RBP15.15■□□□□ 0.02
SNORD88B-201ENST00000408454 GDF15Q99988 308 aa15.15■□□□□ 0.02
SNORD88B-201ENST00000408454 CNNM2Q9H8M5 875 aa15.15■□□□□ 0.02
SNORD88B-201ENST00000408454 FLRT1Q9NZU1 646 aa15.15■□□□□ 0.02
SNORD88B-201ENST00000408454 GREB1LQ9C091 1923 aaPredicted RBP15.15■□□□□ 0.02
SNORD88B-201ENST00000408454 POTEB2H3BUK9 544 aa15.14■□□□□ 0.01
SNORD88B-201ENST00000408454 SLC4A3P48751 1232 aa15.14■□□□□ 0.01
SNORD88B-201ENST00000408454 EVX2Q03828 476 aa15.14■□□□□ 0.01
SNORD88B-201ENST00000408454 KIAA1755Q5JYT7 1200 aa15.14■□□□□ 0.01
SNORD88B-201ENST00000408454 GPATCH4Q5T3I0 446 aaKnown RBP15.14■□□□□ 0.01
SNORD88B-201ENST00000408454 REPS2Q8NFH8 660 aa15.14■□□□□ 0.01
SNORD88B-201ENST00000408454 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.14■□□□□ 0.01
SNORD88B-201ENST00000408454 DUSP11O75319 330 aaKnown RBP15.13■□□□□ 0.01
SNORD88B-201ENST00000408454 IGHA2P01877 340 aa15.13■□□□□ 0.01
SNORD88B-201ENST00000408454 NUCB1Q02818 461 aa15.13■□□□□ 0.01
SNORD88B-201ENST00000408454 IMMTQ16891 758 aaKnown RBP15.13■□□□□ 0.01
SNORD88B-201ENST00000408454 LRIT3Q3SXY7 679 aa15.13■□□□□ 0.01
SNORD88B-201ENST00000408454 BRDTQ58F21 947 aaPredicted RBP15.13■□□□□ 0.01
SNORD88B-201ENST00000408454 FAM47AQ5JRC9 791 aa15.13■□□□□ 0.01
SNORD88B-201ENST00000408454 AKNAD1Q5T1N1 836 aa15.13■□□□□ 0.01
SNORD88B-201ENST00000408454 CCDC129Q6ZRS4 1044 aa15.13■□□□□ 0.01
SNORD88B-201ENST00000408454 GLT1D1Q96MS3 346 aa15.13■□□□□ 0.01
SNORD88B-201ENST00000408454 SEC62Q99442 399 aaKnown RBP15.13■□□□□ 0.01
SNORD88B-201ENST00000408454 PRO3102Q9H379 93 aa15.13■□□□□ 0.01
SNORD88B-201ENST00000408454 ZMYND8Q9ULU4 1186 aaPredicted RBP15.13■□□□□ 0.01
SNORD88B-201ENST00000408454 TACC3Q9Y6A5 838 aa15.13■□□□□ 0.01
SNORD88B-201ENST00000408454 DCDC2CA8MYV0 355 aa15.12■□□□□ 0.01
SNORD88B-201ENST00000408454 CABYRO75952 493 aa15.12■□□□□ 0.01
SNORD88B-201ENST00000408454 FGAP02671 866 aa15.12■□□□□ 0.01
SNORD88B-201ENST00000408454 CHGBP05060 677 aa15.12■□□□□ 0.01
SNORD88B-201ENST00000408454 FGRP09769 529 aa15.12■□□□□ 0.01
SNORD88B-201ENST00000408454 HSPD1P10809 573 aaKnown RBP15.12■□□□□ 0.01
SNORD88B-201ENST00000408454 RTP1P59025 263 aa15.12■□□□□ 0.01
SNORD88B-201ENST00000408454 TRDNQ13061 729 aa15.12■□□□□ 0.01
SNORD88B-201ENST00000408454 LRRC41Q15345 812 aa15.12■□□□□ 0.01
SNORD88B-201ENST00000408454 RRP12Q5JTH9 1297 aaKnown RBP15.12■□□□□ 0.01
SNORD88B-201ENST00000408454 OTUD7AQ8TE49 926 aaPredicted RBP15.12■□□□□ 0.01
SNORD88B-201ENST00000408454 NUP88Q99567 741 aaPredicted RBP15.12■□□□□ 0.01
SNORD88B-201ENST00000408454 KRT23Q9C075 422 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms