RNA–Protein interactions for RNA: ENST00000407249.7

CDK11B-204, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best) BASIC

Gene CDK11B, Length 2,677 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-204ENST00000407249 TPTE2Q6XPS3 522 aa18.39■□□□□ 0.54
CDK11B-204ENST00000407249 ILDR2Q71H61 639 aa18.39■□□□□ 0.54
CDK11B-204ENST00000407249 RASGRP2Q7LDG7 609 aa18.39■□□□□ 0.54
CDK11B-204ENST00000407249 EXOC8Q8IYI6 725 aa18.39■□□□□ 0.54
CDK11B-204ENST00000407249 TRIM22Q8IYM9 498 aa18.39■□□□□ 0.54
CDK11B-204ENST00000407249 MSANTD4Q8NCY6 345 aa18.39■□□□□ 0.54
CDK11B-204ENST00000407249 PPM1EQ8WY54 764 aa18.39■□□□□ 0.54
CDK11B-204ENST00000407249 PDS5AQ29RF7 1337 aaKnown RBP18.39■□□□□ 0.53
CDK11B-204ENST00000407249 POTEB2H3BUK9 544 aa18.39■□□□□ 0.53
CDK11B-204ENST00000407249 FAM163BP0C2L3 166 aa18.39■□□□□ 0.53
CDK11B-204ENST00000407249 BCAMP50895 628 aa18.39■□□□□ 0.53
CDK11B-204ENST00000407249 GOLGA5Q8TBA6 731 aa18.39■□□□□ 0.53
CDK11B-204ENST00000407249 CSRNP2Q9H175 543 aa18.39■□□□□ 0.53
CDK11B-204ENST00000407249 ADD3Q9UEY8 706 aaKnown RBP18.39■□□□□ 0.53
CDK11B-204ENST00000407249 LMAN1P49257 510 aa18.38■□□□□ 0.53
CDK11B-204ENST00000407249 TUBB2AQ13885 445 aa18.38■□□□□ 0.53
CDK11B-204ENST00000407249 CAVIN4Q5BKX8 364 aa18.38■□□□□ 0.53
CDK11B-204ENST00000407249 CPLX3Q8WVH0 158 aa18.38■□□□□ 0.53
CDK11B-204ENST00000407249 PNKPQ96T60 521 aa18.38■□□□□ 0.53
CDK11B-204ENST00000407249 TUBB2BQ9BVA1 445 aa18.38■□□□□ 0.53
CDK11B-204ENST00000407249 NACAP1Q9BZK3 213 aa18.38■□□□□ 0.53
CDK11B-204ENST00000407249 ANKRD2Q9GZV1 360 aa18.38■□□□□ 0.53
CDK11B-204ENST00000407249 EPB41L4AQ9HCS5 686 aaPredicted RBP18.38■□□□□ 0.53
CDK11B-204ENST00000407249 TRPC5Q9UL62 973 aaPredicted RBP18.38■□□□□ 0.53
CDK11B-204ENST00000407249 TACC3Q9Y6A5 838 aa18.38■□□□□ 0.53
CDK11B-204ENST00000407249 MFAP3LO75121 409 aa18.38■□□□□ 0.53
CDK11B-204ENST00000407249 ABCD1P33897 745 aa18.38■□□□□ 0.53
CDK11B-204ENST00000407249 CTDSPL2Q05D32 466 aa18.38■□□□□ 0.53
CDK11B-204ENST00000407249 ZRSR2Q15696 482 aaKnown RBP18.38■□□□□ 0.53
CDK11B-204ENST00000407249 HDXQ7Z353 690 aa18.38■□□□□ 0.53
CDK11B-204ENST00000407249 CERKQ8TCT0 537 aa18.38■□□□□ 0.53
CDK11B-204ENST00000407249 CNNM2Q9H8M5 875 aa18.38■□□□□ 0.53
CDK11B-204ENST00000407249 PDE11AQ9HCR9 933 aa18.38■□□□□ 0.53
CDK11B-204ENST00000407249 CEP131Q9UPN4 1083 aa18.38■□□□□ 0.53
CDK11B-204ENST00000407249 C21orf2O43822 256 aa18.37■□□□□ 0.53
CDK11B-204ENST00000407249 TUBB4BP68371 445 aa18.37■□□□□ 0.53
CDK11B-204ENST00000407249 CUL4BQ13620 913 aa18.37■□□□□ 0.53
CDK11B-204ENST00000407249 MYBPC2Q14324 1141 aa18.37■□□□□ 0.53
CDK11B-204ENST00000407249 MCM6Q14566 821 aa18.37■□□□□ 0.53
CDK11B-204ENST00000407249 ZNF569Q5MCW4 686 aa18.37■□□□□ 0.53
CDK11B-204ENST00000407249 CDKAL1Q5VV42 579 aa18.37■□□□□ 0.53
CDK11B-204ENST00000407249 NAPBQ9H115 298 aa18.37■□□□□ 0.53
CDK11B-204ENST00000407249 L1RE1Q9UN81 338 aa18.37■□□□□ 0.53
CDK11B-204ENST00000407249 MINPP1Q9UNW1 487 aa18.37■□□□□ 0.53
CDK11B-204ENST00000407249 MBD4O95243 580 aa18.37■□□□□ 0.53
CDK11B-204ENST00000407249 CD44P16070 742 aaKnown RBP18.37■□□□□ 0.53
CDK11B-204ENST00000407249 ADRA2BP18089 450 aa18.37■□□□□ 0.53
CDK11B-204ENST00000407249 RTN1Q16799 776 aa18.37■□□□□ 0.53
CDK11B-204ENST00000407249 PTF1AQ7RTS3 328 aa18.37■□□□□ 0.53
CDK11B-204ENST00000407249 IFNL3Q8IZI9 196 aa18.37■□□□□ 0.53
CDK11B-204ENST00000407249 COL4A1P02462 1669 aa18.37■□□□□ 0.53
CDK11B-204ENST00000407249 AFF2P51816 1311 aa18.37■□□□□ 0.53
CDK11B-204ENST00000407249 DEXIO95424 95 aa18.36■□□□□ 0.53
CDK11B-204ENST00000407249 HMGB2P26583 209 aaKnown RBP18.36■□□□□ 0.53
CDK11B-204ENST00000407249 CD151P48509 253 aa18.36■□□□□ 0.53
CDK11B-204ENST00000407249 AP1ARQ63HQ0 302 aa18.36■□□□□ 0.53
CDK11B-204ENST00000407249 BICDL1Q6ZP65 573 aa18.36■□□□□ 0.53
CDK11B-204ENST00000407249 C3orf67Q6ZVT6 689 aa18.36■□□□□ 0.53
CDK11B-204ENST00000407249 OXER1Q8TDS5 423 aa18.36■□□□□ 0.53
CDK11B-204ENST00000407249 MIEF2Q96C03 454 aa18.36■□□□□ 0.53
CDK11B-204ENST00000407249 CTAGE1Q96RT6 745 aa18.36■□□□□ 0.53
CDK11B-204ENST00000407249 MTA3Q9BTC8 594 aa18.36■□□□□ 0.53
CDK11B-204ENST00000407249 LRP2BPQ9P2M1 347 aa18.36■□□□□ 0.53
CDK11B-204ENST00000407249 CTAGE9A4FU28 777 aa18.36■□□□□ 0.53
CDK11B-204ENST00000407249 CASP14P31944 242 aa18.36■□□□□ 0.53
CDK11B-204ENST00000407249 KIF4BQ2VIQ3 1234 aa18.36■□□□□ 0.53
CDK11B-204ENST00000407249 AKNAD1Q5T1N1 836 aa18.36■□□□□ 0.53
CDK11B-204ENST00000407249 KLHL10Q6JEL2 608 aa18.36■□□□□ 0.53
CDK11B-204ENST00000407249 CCDC82Q8N4S0 544 aa18.36■□□□□ 0.53
CDK11B-204ENST00000407249 CRACR2BQ8N4Y2 399 aaPredicted RBP18.36■□□□□ 0.53
CDK11B-204ENST00000407249 SYNRGQ9UMZ2 1314 aa18.36■□□□□ 0.53
CDK11B-204ENST00000407249 A0A087X0B3 334 aa18.36■□□□□ 0.53
CDK11B-204ENST00000407249 ERLIN1O75477 346 aa18.36■□□□□ 0.53
CDK11B-204ENST00000407249 FECHP22830 423 aa18.36■□□□□ 0.53
CDK11B-204ENST00000407249 KCNQ4P56696 695 aa18.36■□□□□ 0.53
CDK11B-204ENST00000407249 STX17P56962 302 aa18.36■□□□□ 0.53
CDK11B-204ENST00000407249 RPS8P62241 208 aaKnown RBP18.36■□□□□ 0.53
CDK11B-204ENST00000407249 KRT23Q9C075 422 aa18.36■□□□□ 0.53
CDK11B-204ENST00000407249 CABP5Q9NP86 173 aa18.36■□□□□ 0.53
CDK11B-204ENST00000407249 SRP68Q9UHB9 627 aaKnown RBP18.36■□□□□ 0.53
CDK11B-204ENST00000407249 SNAP23O00161 211 aa18.35■□□□□ 0.53
CDK11B-204ENST00000407249 GYPCP04921 128 aa18.35■□□□□ 0.53
CDK11B-204ENST00000407249 ACTN2P35609 894 aa18.35■□□□□ 0.53
CDK11B-204ENST00000407249 CNGA4Q8IV77 575 aa18.35■□□□□ 0.53
CDK11B-204ENST00000407249 CMTR1Q8N1G2 835 aaKnown RBP18.35■□□□□ 0.53
CDK11B-204ENST00000407249 IQUBQ8NA54 791 aa18.35■□□□□ 0.53
CDK11B-204ENST00000407249 ABCB6Q9NP58 842 aa18.35■□□□□ 0.53
CDK11B-204ENST00000407249 AATFQ9NY61 560 aaKnown RBP eCLIP18.35■□□□□ 0.53
CDK11B-204ENST00000407249 VPS18Q9P253 973 aa18.35■□□□□ 0.53
CDK11B-204ENST00000407249 GOLGA6CA6NDK9 693 aa18.35■□□□□ 0.53
CDK11B-204ENST00000407249 GOLGA6BA6NDN3 693 aa18.35■□□□□ 0.53
CDK11B-204ENST00000407249 GOLGA6DP0CG33 693 aa18.35■□□□□ 0.53
CDK11B-204ENST00000407249 TRAF1Q13077 416 aa18.35■□□□□ 0.53
CDK11B-204ENST00000407249 SH3RF1Q7Z6J0 888 aa18.35■□□□□ 0.53
CDK11B-204ENST00000407249 CCDC51Q96ER9 411 aa18.35■□□□□ 0.53
CDK11B-204ENST00000407249 GOLGA6AQ9NYA3 693 aa18.35■□□□□ 0.53
CDK11B-204ENST00000407249 TTF2Q9UNY4 1162 aaKnown RBP18.35■□□□□ 0.53
CDK11B-204ENST00000407249 AFMP43652 599 aa18.34■□□□□ 0.53
CDK11B-204ENST00000407249 FXR1P51114 621 aaKnown RBP eCLIP18.34■□□□□ 0.53
CDK11B-204ENST00000407249 TRAPPC3LQ5T215 181 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms