RNA–Protein interactions for RNA: ENST00000406516.5

LIMK2-204, Transcript of LIM domain kinase 2, humanhuman

TSL 5 BASIC

Gene LIMK2, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-204ENST00000406516 EIF6P56537 245 aaKnown RBP17.29■□□□□ 0.36
LIMK2-204ENST00000406516 TOGARAM2Q6ZUX3 1019 aa17.29■□□□□ 0.36
LIMK2-204ENST00000406516 CATIPQ7Z7H3 387 aa17.29■□□□□ 0.36
LIMK2-204ENST00000406516 SCN9AQ15858 1988 aa17.29■□□□□ 0.36
LIMK2-204ENST00000406516 NOM1Q5C9Z4 860 aaKnown RBP17.29■□□□□ 0.36
LIMK2-204ENST00000406516 DACT2Q5SW24 774 aa17.29■□□□□ 0.36
LIMK2-204ENST00000406516 CIAPIN1Q6FI81 312 aa17.29■□□□□ 0.36
LIMK2-204ENST00000406516 CERS5Q8N5B7 392 aa17.29■□□□□ 0.36
LIMK2-204ENST00000406516 PHF20Q9BVI0 1012 aa17.29■□□□□ 0.36
LIMK2-204ENST00000406516 AATFQ9NY61 560 aaKnown RBP eCLIP17.29■□□□□ 0.36
LIMK2-204ENST00000406516 GJA3Q9Y6H8 435 aa17.29■□□□□ 0.36
LIMK2-204ENST00000406516 MYH2Q9UKX2 1941 aa17.28■□□□□ 0.36
LIMK2-204ENST00000406516 DDNO94850 711 aaPredicted RBP17.28■□□□□ 0.36
LIMK2-204ENST00000406516 H2AFXP16104 143 aaPredicted RBP17.28■□□□□ 0.36
LIMK2-204ENST00000406516 STX17P56962 302 aa17.28■□□□□ 0.36
LIMK2-204ENST00000406516 FUT2Q10981 343 aa17.28■□□□□ 0.36
LIMK2-204ENST00000406516 GRIK5Q16478 980 aa17.28■□□□□ 0.36
LIMK2-204ENST00000406516 STRIP1Q5VSL9 837 aa17.28■□□□□ 0.36
LIMK2-204ENST00000406516 MNS1Q8NEH6 495 aa17.28■□□□□ 0.36
LIMK2-204ENST00000406516 SYMPKQ92797 1274 aaKnown RBP17.28■□□□□ 0.36
LIMK2-204ENST00000406516 SPATA20Q8TB22 786 aa17.28■□□□□ 0.36
LIMK2-204ENST00000406516 FAM205AQ6ZU69 1335 aa17.28■□□□□ 0.36
LIMK2-204ENST00000406516 BAZ2AQ9UIF9 1905 aaKnown RBP17.27■□□□□ 0.36
LIMK2-204ENST00000406516 STX10O60499 249 aa17.27■□□□□ 0.36
LIMK2-204ENST00000406516 VIL1P09327 827 aaKnown RBP17.27■□□□□ 0.36
LIMK2-204ENST00000406516 EVX2Q03828 476 aa17.27■□□□□ 0.36
LIMK2-204ENST00000406516 PPP2R5BQ15173 497 aa17.27■□□□□ 0.36
LIMK2-204ENST00000406516 ZNF174Q15697 407 aa17.27■□□□□ 0.36
LIMK2-204ENST00000406516 IQCA1Q86XH1 822 aa17.27■□□□□ 0.36
LIMK2-204ENST00000406516 DESI2Q9BSY9 194 aa17.27■□□□□ 0.36
LIMK2-204ENST00000406516 CARD6Q9BX69 1037 aa17.27■□□□□ 0.36
LIMK2-204ENST00000406516 SEMA3EO15041 775 aa17.27■□□□□ 0.35
LIMK2-204ENST00000406516 PRPF3O43395 683 aaKnown RBP17.27■□□□□ 0.35
LIMK2-204ENST00000406516 GNG11P61952 73 aa17.27■□□□□ 0.35
LIMK2-204ENST00000406516 SMYD4Q8IYR2 804 aaPredicted RBP17.27■□□□□ 0.35
LIMK2-204ENST00000406516 UBXN4Q92575 508 aa17.27■□□□□ 0.35
LIMK2-204ENST00000406516 PAGE5Q96GU1 130 aa17.27■□□□□ 0.35
LIMK2-204ENST00000406516 NOL10Q9BSC4 688 aaKnown RBP17.27■□□□□ 0.35
LIMK2-204ENST00000406516 SLFN14P0C7P3 912 aa17.26■□□□□ 0.35
LIMK2-204ENST00000406516 CD44P16070 742 aaKnown RBP17.26■□□□□ 0.35
LIMK2-204ENST00000406516 ERCC5P28715 1186 aaPredicted RBP17.26■□□□□ 0.35
LIMK2-204ENST00000406516 CLCN6P51797 869 aa17.26■□□□□ 0.35
LIMK2-204ENST00000406516 MFSD14BQ5SR56 506 aa17.26■□□□□ 0.35
LIMK2-204ENST00000406516 ZNF384Q8TF68 577 aa17.26■□□□□ 0.35
LIMK2-204ENST00000406516 CCDC34Q96HJ3 373 aa17.26■□□□□ 0.35
LIMK2-204ENST00000406516 WDR24Q96S15 920 aa17.26■□□□□ 0.35
LIMK2-204ENST00000406516 TEX33O43247 280 aa17.26■□□□□ 0.35
LIMK2-204ENST00000406516 TROAPQ12815 778 aa17.26■□□□□ 0.35
LIMK2-204ENST00000406516 NR1I3Q14994 352 aa17.26■□□□□ 0.35
LIMK2-204ENST00000406516 STAMQ92783 540 aa17.26■□□□□ 0.35
LIMK2-204ENST00000406516 SYNRGQ9UMZ2 1314 aa17.26■□□□□ 0.35
LIMK2-204ENST00000406516 TNIP1Q15025 636 aa17.25■□□□□ 0.35
LIMK2-204ENST00000406516 RSBN1LQ6PCB5 846 aaPredicted RBP17.25■□□□□ 0.35
LIMK2-204ENST00000406516 BRMS1Q9HCU9 246 aa17.25■□□□□ 0.35
LIMK2-204ENST00000406516 DICER1Q9UPY3 1922 aaKnown RBP17.25■□□□□ 0.35
LIMK2-204ENST00000406516 A0A1B0GTH6 734 aa17.25■□□□□ 0.35
LIMK2-204ENST00000406516 USP17L12C9JPN9 530 aa17.25■□□□□ 0.35
LIMK2-204ENST00000406516 USP17L21D6R901 530 aa17.25■□□□□ 0.35
LIMK2-204ENST00000406516 NMT2O60551 498 aa17.25■□□□□ 0.35
LIMK2-204ENST00000406516 GABPB1Q06547 395 aaPredicted RBP17.25■□□□□ 0.35
LIMK2-204ENST00000406516 MTF1Q14872 753 aa17.25■□□□□ 0.35
LIMK2-204ENST00000406516 CTR9Q6PD62 1173 aa17.25■□□□□ 0.35
LIMK2-204ENST00000406516 ZNF771Q7L3S4 317 aaPredicted RBP17.25■□□□□ 0.35
LIMK2-204ENST00000406516 RBM28Q9NW13 759 aaKnown RBP17.25■□□□□ 0.35
LIMK2-204ENST00000406516 F8W031 263 aaPredicted RBP17.24■□□□□ 0.35
LIMK2-204ENST00000406516 CASQ1P31415 396 aa17.24■□□□□ 0.35
LIMK2-204ENST00000406516 WDR66Q8TBY9 1149 aa17.24■□□□□ 0.35
LIMK2-204ENST00000406516 ST7Q9NRC1 585 aa17.24■□□□□ 0.35
LIMK2-204ENST00000406516 SHTN1A0MZ66 631 aa17.24■□□□□ 0.35
LIMK2-204ENST00000406516 ZBTB22O15209 634 aa17.24■□□□□ 0.35
LIMK2-204ENST00000406516 TADA3O75528 432 aa17.24■□□□□ 0.35
LIMK2-204ENST00000406516 PRDX5P30044 214 aa17.24■□□□□ 0.35
LIMK2-204ENST00000406516 KARSQ15046 597 aaKnown RBP17.24■□□□□ 0.35
LIMK2-204ENST00000406516 TTC38Q5R3I4 469 aa17.24■□□□□ 0.35
LIMK2-204ENST00000406516 SPATA1Q5VX52 437 aa17.24■□□□□ 0.35
LIMK2-204ENST00000406516 DPY19L2Q6NUT2 758 aa17.24■□□□□ 0.35
LIMK2-204ENST00000406516 TMTC3Q6ZXV5 915 aa17.24■□□□□ 0.35
LIMK2-204ENST00000406516 KIAA0825Q8IV33 1275 aa17.24■□□□□ 0.35
LIMK2-204ENST00000406516 GPC2Q8N158 579 aa17.24■□□□□ 0.35
LIMK2-204ENST00000406516 FERMT2Q96AC1 680 aa17.24■□□□□ 0.35
LIMK2-204ENST00000406516 GMLQ99445 158 aa17.24■□□□□ 0.35
LIMK2-204ENST00000406516 SRRTQ9BXP5 876 aaKnown RBP17.24■□□□□ 0.35
LIMK2-204ENST00000406516 FAM53CQ9NYF3 392 aa17.24■□□□□ 0.35
LIMK2-204ENST00000406516 GOLGA6L9A6NEM1 432 aa17.24■□□□□ 0.35
LIMK2-204ENST00000406516 GLTPD2A6NH11 291 aa17.24■□□□□ 0.35
LIMK2-204ENST00000406516 COBLO75128 1261 aa17.24■□□□□ 0.35
LIMK2-204ENST00000406516 GMPSP49915 693 aaPredicted RBP17.24■□□□□ 0.35
LIMK2-204ENST00000406516 PTGDRQ13258 359 aa17.24■□□□□ 0.35
LIMK2-204ENST00000406516 NPY5RQ15761 445 aa17.24■□□□□ 0.35
LIMK2-204ENST00000406516 FAM47AQ5JRC9 791 aa17.24■□□□□ 0.35
LIMK2-204ENST00000406516 SH3RF1Q7Z6J0 888 aa17.24■□□□□ 0.35
LIMK2-204ENST00000406516 CPLX3Q8WVH0 158 aa17.24■□□□□ 0.35
LIMK2-204ENST00000406516 BAZ2BQ9UIF8 2168 aaKnown RBP17.23■□□□□ 0.35
LIMK2-204ENST00000406516 SOWAHDA6NJG2 315 aa17.23■□□□□ 0.35
LIMK2-204ENST00000406516 AKR1B15C9JRZ8 316 aaPredicted RBP17.23■□□□□ 0.35
LIMK2-204ENST00000406516 CALM1P0DP23 149 aa17.23■□□□□ 0.35
LIMK2-204ENST00000406516 CALM2P0DP24 149 aa17.23■□□□□ 0.35
LIMK2-204ENST00000406516 CALM3P0DP25 149 aa17.23■□□□□ 0.35
LIMK2-204ENST00000406516 DPYDQ12882 1025 aa17.23■□□□□ 0.35
LIMK2-204ENST00000406516 CUL4BQ13620 913 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms