RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 KBTBD3Q8NAB2 608 aa13.22□□□□□ -0.29
SMCR8-201ENST00000406438 ZNF594Q96JF6 807 aaPredicted RBP13.22□□□□□ -0.29
SMCR8-201ENST00000406438 PANK4Q9NVE7 773 aa13.22□□□□□ -0.29
SMCR8-201ENST00000406438 VPS54Q9P1Q0 977 aa13.22□□□□□ -0.29
SMCR8-201ENST00000406438 KLHL14Q9P2G3 628 aa13.22□□□□□ -0.29
SMCR8-201ENST00000406438 SMCO2A6NFE2 343 aa13.21□□□□□ -0.29
SMCR8-201ENST00000406438 ECE1P42892 770 aa13.21□□□□□ -0.29
SMCR8-201ENST00000406438 NELFCDQ8IXH7 590 aa13.21□□□□□ -0.29
SMCR8-201ENST00000406438 WHAMMQ8TF30 809 aa13.21□□□□□ -0.29
SMCR8-201ENST00000406438 GBP5Q96PP8 586 aa13.21□□□□□ -0.29
SMCR8-201ENST00000406438 NBPF3Q9H094 633 aa13.21□□□□□ -0.29
SMCR8-201ENST00000406438 PIK3C2GO75747 1445 aa13.21□□□□□ -0.29
SMCR8-201ENST00000406438 GARSP41250 739 aaKnown RBP13.21□□□□□ -0.29
SMCR8-201ENST00000406438 PRKG1Q13976 671 aa13.21□□□□□ -0.29
SMCR8-201ENST00000406438 PDZD8Q8NEN9 1154 aa13.21□□□□□ -0.29
SMCR8-201ENST00000406438 S100BP04271 92 aaPredicted RBP13.21□□□□□ -0.29
SMCR8-201ENST00000406438 LRMPQ12912 555 aa13.21□□□□□ -0.29
SMCR8-201ENST00000406438 OPHN1O60890 802 aa13.21□□□□□ -0.29
SMCR8-201ENST00000406438 ABCB4P21439 1286 aa13.21□□□□□ -0.29
SMCR8-201ENST00000406438 ATP6V1E1P36543 226 aa13.21□□□□□ -0.29
SMCR8-201ENST00000406438 POLGP54098 1239 aaPredicted RBP13.21□□□□□ -0.29
SMCR8-201ENST00000406438 HOMER3Q9NSC5 361 aa13.21□□□□□ -0.29
SMCR8-201ENST00000406438 DDX25Q9UHL0 483 aaKnown RBP13.21□□□□□ -0.29
SMCR8-201ENST00000406438 ORC6Q9Y5N6 252 aa13.21□□□□□ -0.29
SMCR8-201ENST00000406438 PSDA5PKW4 1024 aaPredicted RBP13.21□□□□□ -0.3
SMCR8-201ENST00000406438 SH3BGRP55822 239 aaPredicted RBP13.21□□□□□ -0.3
SMCR8-201ENST00000406438 CPA1P15085 419 aa13.21□□□□□ -0.3
SMCR8-201ENST00000406438 ELF2Q15723 593 aa13.21□□□□□ -0.3
SMCR8-201ENST00000406438 RNF169Q8NCN4 708 aa13.21□□□□□ -0.3
SMCR8-201ENST00000406438 PSTPIP2Q9H939 334 aa13.21□□□□□ -0.3
SMCR8-201ENST00000406438 LONRF3Q496Y0 759 aa13.2□□□□□ -0.3
SMCR8-201ENST00000406438 A0A1W2PP64 1363 aa13.2□□□□□ -0.3
SMCR8-201ENST00000406438 KCNK3O14649 394 aa13.2□□□□□ -0.3
SMCR8-201ENST00000406438 PPIP5K2O43314 1243 aa13.2□□□□□ -0.3
SMCR8-201ENST00000406438 MCF2L2Q86YR7 1114 aa13.2□□□□□ -0.3
SMCR8-201ENST00000406438 FAM227BQ96M60 508 aa13.2□□□□□ -0.3
SMCR8-201ENST00000406438 RPS6KC1Q96S38 1066 aa13.2□□□□□ -0.3
SMCR8-201ENST00000406438 EDC4Q6P2E9 1401 aaKnown RBP13.2□□□□□ -0.3
SMCR8-201ENST00000406438 A6NJR5 290 aa13.2□□□□□ -0.3
SMCR8-201ENST00000406438 EIF3CLB5ME19 914 aaKnown RBP13.2□□□□□ -0.3
SMCR8-201ENST00000406438 NOP9Q86U38 636 aaKnown RBP13.2□□□□□ -0.3
SMCR8-201ENST00000406438 FAM71BQ8TC56 605 aa13.2□□□□□ -0.3
SMCR8-201ENST00000406438 EYA1Q99502 592 aa13.2□□□□□ -0.3
SMCR8-201ENST00000406438 EIF3CQ99613 913 aaKnown RBP13.2□□□□□ -0.3
SMCR8-201ENST00000406438 PARD3Q8TEW0 1356 aa13.2□□□□□ -0.3
SMCR8-201ENST00000406438 K7ENM7 598 aa13.2□□□□□ -0.3
SMCR8-201ENST00000406438 DCAF15Q66K64 600 aa13.2□□□□□ -0.3
SMCR8-201ENST00000406438 JADE1Q6IE81 842 aa13.2□□□□□ -0.3
SMCR8-201ENST00000406438 DPY19L2Q6NUT2 758 aa13.2□□□□□ -0.3
SMCR8-201ENST00000406438 MAPKAPK5Q8IW41 473 aa13.2□□□□□ -0.3
SMCR8-201ENST00000406438 FAM178BQ8IXR5 827 aa13.2□□□□□ -0.3
SMCR8-201ENST00000406438 CCDC51Q96ER9 411 aa13.2□□□□□ -0.3
SMCR8-201ENST00000406438 SLF1Q9BQI6 1058 aa13.2□□□□□ -0.3
SMCR8-201ENST00000406438 KCNJ18B7U540 433 aa13.2□□□□□ -0.3
SMCR8-201ENST00000406438 KCNJ12Q14500 433 aa13.2□□□□□ -0.3
SMCR8-201ENST00000406438 GADL1Q6ZQY3 521 aa13.2□□□□□ -0.3
SMCR8-201ENST00000406438 MYOCDQ8IZQ8 938 aa13.2□□□□□ -0.3
SMCR8-201ENST00000406438 NME8Q8N427 588 aa13.2□□□□□ -0.3
SMCR8-201ENST00000406438 POMGNT1Q8WZA1 660 aa13.2□□□□□ -0.3
SMCR8-201ENST00000406438 CCDC93Q567U6 631 aa13.2□□□□□ -0.3
SMCR8-201ENST00000406438 TSPYL2Q9H2G4 693 aaPredicted RBP13.2□□□□□ -0.3
SMCR8-201ENST00000406438 TSPYL6Q8N831 410 aa13.2□□□□□ -0.3
SMCR8-201ENST00000406438 MRPL11Q9Y3B7 192 aaKnown RBP13.2□□□□□ -0.3
SMCR8-201ENST00000406438 MFSD14BQ5SR56 506 aa13.19□□□□□ -0.3
SMCR8-201ENST00000406438 PHLDB3Q6NSJ2 640 aa13.19□□□□□ -0.3
SMCR8-201ENST00000406438 ATP8A2Q9NTI2 1148 aa13.19□□□□□ -0.3
SMCR8-201ENST00000406438 HESX1Q9UBX0 185 aa13.19□□□□□ -0.3
SMCR8-201ENST00000406438 SBNO1A3KN83 1393 aa13.19□□□□□ -0.3
SMCR8-201ENST00000406438 MORC3Q14149 939 aa13.19□□□□□ -0.3
SMCR8-201ENST00000406438 U2AF1L4Q8WU68 220 aaKnown RBP13.19□□□□□ -0.3
SMCR8-201ENST00000406438 CDKL2Q92772 493 aa13.19□□□□□ -0.3
SMCR8-201ENST00000406438 BLZF1Q9H2G9 400 aa13.19□□□□□ -0.3
SMCR8-201ENST00000406438 PNMA2Q9UL42 364 aa13.19□□□□□ -0.3
SMCR8-201ENST00000406438 ABCA5Q8WWZ7 1642 aa13.19□□□□□ -0.3
SMCR8-201ENST00000406438 PRDM1O75626 825 aa13.19□□□□□ -0.3
SMCR8-201ENST00000406438 IFRD2Q12894 506 aaPredicted RBP13.19□□□□□ -0.3
SMCR8-201ENST00000406438 RAPH1Q70E73 1250 aa13.19□□□□□ -0.3
SMCR8-201ENST00000406438 RUNDC3BQ96NL0 473 aa13.19□□□□□ -0.3
SMCR8-201ENST00000406438 SLC52A2Q9HAB3 445 aa13.19□□□□□ -0.3
SMCR8-201ENST00000406438 SAT1P21673 171 aa13.19□□□□□ -0.3
SMCR8-201ENST00000406438 U2AF2P26368 475 aaKnown RBP eCLIP13.19□□□□□ -0.3
SMCR8-201ENST00000406438 TECP42680 631 aa13.19□□□□□ -0.3
SMCR8-201ENST00000406438 TFAP4Q01664 338 aa13.19□□□□□ -0.3
SMCR8-201ENST00000406438 PNOCQ13519 176 aa13.19□□□□□ -0.3
SMCR8-201ENST00000406438 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.19□□□□□ -0.3
SMCR8-201ENST00000406438 NLRC4Q9NPP4 1024 aa13.19□□□□□ -0.3
SMCR8-201ENST00000406438 SRGAP2BP0DMP2 458 aa13.19□□□□□ -0.3
SMCR8-201ENST00000406438 PTPREP23469 700 aa13.19□□□□□ -0.3
SMCR8-201ENST00000406438 GUCY2FP51841 1108 aa13.19□□□□□ -0.3
SMCR8-201ENST00000406438 PPARDQ03181 441 aa13.19□□□□□ -0.3
SMCR8-201ENST00000406438 KAZNQ674X7 775 aa13.19□□□□□ -0.3
SMCR8-201ENST00000406438 ZNF449Q6P9G9 518 aa13.19□□□□□ -0.3
SMCR8-201ENST00000406438 SLC17A8Q8NDX2 589 aa13.19□□□□□ -0.3
SMCR8-201ENST00000406438 PAGR1Q9BTK6 254 aa13.19□□□□□ -0.3
SMCR8-201ENST00000406438 ARHGEF12Q9NZN5 1544 aa13.19□□□□□ -0.3
SMCR8-201ENST00000406438 HOXB7P09629 217 aa13.19□□□□□ -0.3
SMCR8-201ENST00000406438 CTSWP56202 376 aa13.19□□□□□ -0.3
SMCR8-201ENST00000406438 HDAC11Q96DB2 347 aa13.19□□□□□ -0.3
SMCR8-201ENST00000406438 TTC1Q99614 292 aa13.19□□□□□ -0.3
SMCR8-201ENST00000406438 SNX14Q9Y5W7 946 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms