RNA–Protein interactions for RNA: ENST00000404040.5

HDAC11-204, Transcript of histone deacetylase 11, humanhuman

TSL 3 BASIC

Gene HDAC11, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-204ENST00000404040 AMOTL1Q8IY63 956 aa21.46■■□□□ 1.03
HDAC11-204ENST00000404040 REPS2Q8NFH8 660 aa21.46■■□□□ 1.03
HDAC11-204ENST00000404040 LENG1Q96BZ8 264 aaPredicted RBP21.46■■□□□ 1.03
HDAC11-204ENST00000404040 GPATCH3Q96I76 525 aa21.46■■□□□ 1.03
HDAC11-204ENST00000404040 KANSL2Q9H9L4 492 aa21.46■■□□□ 1.03
HDAC11-204ENST00000404040 USP17L12C9JPN9 530 aa21.45■■□□□ 1.02
HDAC11-204ENST00000404040 USP17L21D6R901 530 aa21.45■■□□□ 1.02
HDAC11-204ENST00000404040 ZNF865P0CJ78 1059 aaPredicted RBP21.45■■□□□ 1.02
HDAC11-204ENST00000404040 STAT3P40763 770 aa21.45■■□□□ 1.02
HDAC11-204ENST00000404040 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.45■■□□□ 1.02
HDAC11-204ENST00000404040 GOPCQ9HD26 462 aa21.45■■□□□ 1.02
HDAC11-204ENST00000404040 ADAMTS4O75173 837 aa21.44■■□□□ 1.02
HDAC11-204ENST00000404040 RAG1P15918 1043 aa21.44■■□□□ 1.02
HDAC11-204ENST00000404040 FPGSQ05932 587 aa21.44■■□□□ 1.02
HDAC11-204ENST00000404040 FAM83BQ5T0W9 1011 aa21.44■■□□□ 1.02
HDAC11-204ENST00000404040 DDRGK1Q96HY6 314 aa21.44■■□□□ 1.02
HDAC11-204ENST00000404040 CCDC136Q96JN2 1154 aa21.44■■□□□ 1.02
HDAC11-204ENST00000404040 CNPY2Q9Y2B0 182 aa21.44■■□□□ 1.02
HDAC11-204ENST00000404040 SYNRGQ9UMZ2 1314 aa21.44■■□□□ 1.02
HDAC11-204ENST00000404040 MUC3AQ02505 3323 aa21.44■■□□□ 1.02
HDAC11-204ENST00000404040 SMARCA5O60264 1052 aaPredicted RBP21.43■■□□□ 1.02
HDAC11-204ENST00000404040 CHGBP05060 677 aa21.43■■□□□ 1.02
HDAC11-204ENST00000404040 ANKRD33Q7Z3H0 272 aa21.43■■□□□ 1.02
HDAC11-204ENST00000404040 TSEN34Q9BSV6 310 aaKnown RBP21.43■■□□□ 1.02
HDAC11-204ENST00000404040 BOLA2Q9H3K6 86 aa21.43■■□□□ 1.02
HDAC11-204ENST00000404040 LRRC37A2A6NM11 1700 aa21.42■■□□□ 1.02
HDAC11-204ENST00000404040 ATP5JP18859 108 aa21.42■■□□□ 1.02
HDAC11-204ENST00000404040 UBE3CQ15386 1083 aa21.42■■□□□ 1.02
HDAC11-204ENST00000404040 CENPQQ7L2Z9 268 aaPredicted RBP21.42■■□□□ 1.02
HDAC11-204ENST00000404040 MSL3Q8N5Y2 521 aaKnown RBP21.42■■□□□ 1.02
HDAC11-204ENST00000404040 HAUS7Q99871 368 aa21.42■■□□□ 1.02
HDAC11-204ENST00000404040 BCL11AQ9H165 835 aa21.42■■□□□ 1.02
HDAC11-204ENST00000404040 SYNGAP1Q96PV0 1343 aa21.41■■□□□ 1.02
HDAC11-204ENST00000404040 RAD21O60216 631 aa21.41■■□□□ 1.02
HDAC11-204ENST00000404040 ACLYP53396 1101 aa21.41■■□□□ 1.02
HDAC11-204ENST00000404040 NUCB1Q02818 461 aa21.41■■□□□ 1.02
HDAC11-204ENST00000404040 FAAP100Q0VG06 881 aa21.41■■□□□ 1.02
HDAC11-204ENST00000404040 CHD1LQ86WJ1 897 aa21.41■■□□□ 1.02
HDAC11-204ENST00000404040 TOX2Q96NM4 488 aa21.41■■□□□ 1.02
HDAC11-204ENST00000404040 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.41■■□□□ 1.02
HDAC11-204ENST00000404040 TEX13BQ9BXU2 312 aa21.41■■□□□ 1.02
HDAC11-204ENST00000404040 STARD7Q9NQZ5 370 aa21.41■■□□□ 1.02
HDAC11-204ENST00000404040 TMEM39AQ9NV64 488 aa21.41■■□□□ 1.02
HDAC11-204ENST00000404040 PPP4R2Q9NY27 417 aa21.41■■□□□ 1.02
HDAC11-204ENST00000404040 SLC4A4Q9Y6R1 1079 aa21.41■■□□□ 1.02
HDAC11-204ENST00000404040 DNAJB2P25686 324 aa21.4■■□□□ 1.02
HDAC11-204ENST00000404040 B4GALNT3Q6L9W6 998 aa21.4■■□□□ 1.02
HDAC11-204ENST00000404040 CTR9Q6PD62 1173 aa21.4■■□□□ 1.02
HDAC11-204ENST00000404040 SLF1Q9BQI6 1058 aa21.4■■□□□ 1.02
HDAC11-204ENST00000404040 ARPP21Q9UBL0 812 aaPredicted RBP21.4■■□□□ 1.02
HDAC11-204ENST00000404040 TTC41PQ6P2S7 1318 aa21.39■■□□□ 1.01
HDAC11-204ENST00000404040 MOXD2PA6NHM9 499 aa21.39■■□□□ 1.01
HDAC11-204ENST00000404040 DCDC2CA8MYV0 355 aa21.39■■□□□ 1.01
HDAC11-204ENST00000404040 SNRNP48Q6IEG0 339 aaKnown RBP21.39■■□□□ 1.01
HDAC11-204ENST00000404040 KLHDC9Q8NEP7 349 aa21.39■■□□□ 1.01
HDAC11-204ENST00000404040 NUP133Q8WUM0 1156 aa21.39■■□□□ 1.01
HDAC11-204ENST00000404040 NUP88Q99567 741 aaPredicted RBP21.39■■□□□ 1.01
HDAC11-204ENST00000404040 ECHDC1Q9NTX5 307 aa21.39■■□□□ 1.01
HDAC11-204ENST00000404040 TBX21Q9UL17 535 aa21.39■■□□□ 1.01
HDAC11-204ENST00000404040 CHD9Q3L8U1 2897 aa21.38■■□□□ 1.01
HDAC11-204ENST00000404040 DNAJC25-GNG10A0A024R161 153 aa21.38■■□□□ 1.01
HDAC11-204ENST00000404040 ERC2O15083 957 aa21.38■■□□□ 1.01
HDAC11-204ENST00000404040 SNAI1O95863 264 aaPredicted RBP21.38■■□□□ 1.01
HDAC11-204ENST00000404040 CCSAPQ6IQ19 270 aaPredicted RBP21.38■■□□□ 1.01
HDAC11-204ENST00000404040 MAMDC4Q6UXC1 1216 aa21.38■■□□□ 1.01
HDAC11-204ENST00000404040 ZHX1Q9UKY1 873 aaPredicted RBP21.38■■□□□ 1.01
HDAC11-204ENST00000404040 FAM184BQ9ULE4 1060 aa21.38■■□□□ 1.01
HDAC11-204ENST00000404040 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.37■■□□□ 1.01
HDAC11-204ENST00000404040 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.37■■□□□ 1.01
HDAC11-204ENST00000404040 MYADML2A6NDP7 307 aa21.37■■□□□ 1.01
HDAC11-204ENST00000404040 CST5P28325 142 aaPredicted RBP21.37■■□□□ 1.01
HDAC11-204ENST00000404040 GRIN2CQ14957 1233 aa21.37■■□□□ 1.01
HDAC11-204ENST00000404040 KCNA10Q16322 511 aa21.37■■□□□ 1.01
HDAC11-204ENST00000404040 LNPKQ9C0E8 428 aa21.37■■□□□ 1.01
HDAC11-204ENST00000404040 PUS7LQ9H0K6 701 aaKnown RBP21.37■■□□□ 1.01
HDAC11-204ENST00000404040 RIPK3Q9Y572 518 aa21.37■■□□□ 1.01
HDAC11-204ENST00000404040 MROH7Q68CQ1 1323 aa21.36■■□□□ 1.01
HDAC11-204ENST00000404040 LCTP09848 1927 aa21.36■■□□□ 1.01
HDAC11-204ENST00000404040 ATP2A1O14983 1001 aa21.36■■□□□ 1.01
HDAC11-204ENST00000404040 DUSP11O75319 330 aaKnown RBP21.36■■□□□ 1.01
HDAC11-204ENST00000404040 NDUFB10O96000 172 aa21.36■■□□□ 1.01
HDAC11-204ENST00000404040 TIMP1P01033 207 aa21.36■■□□□ 1.01
HDAC11-204ENST00000404040 MX1P20591 662 aa21.36■■□□□ 1.01
HDAC11-204ENST00000404040 RASA1P20936 1047 aa21.36■■□□□ 1.01
HDAC11-204ENST00000404040 ZSCAN25Q6NSZ9 544 aa21.36■■□□□ 1.01
HDAC11-204ENST00000404040 ZNF467Q7Z7K2 595 aaPredicted RBP21.36■■□□□ 1.01
HDAC11-204ENST00000404040 DDX11Q96FC9 970 aa21.36■■□□□ 1.01
HDAC11-204ENST00000404040 ELP1O95163 1332 aa21.35■■□□□ 1.01
HDAC11-204ENST00000404040 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.35■■□□□ 1.01
HDAC11-204ENST00000404040 USP38Q8NB14 1042 aa21.35■■□□□ 1.01
HDAC11-204ENST00000404040 SYMPKQ92797 1274 aaKnown RBP21.35■■□□□ 1.01
HDAC11-204ENST00000404040 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.35■■□□□ 1.011e-7■■■□□ 15.1
HDAC11-204ENST00000404040 PRDM6Q9NQX0 595 aa21.35■■□□□ 1.01
HDAC11-204ENST00000404040 NYAP2Q9P242 653 aa21.35■■□□□ 1.01
HDAC11-204ENST00000404040 F5H6K3 240 aa21.34■■□□□ 1.01
HDAC11-204ENST00000404040 ADCY6O43306 1168 aa21.34■■□□□ 1.01
HDAC11-204ENST00000404040 KLRC3Q07444 240 aa21.34■■□□□ 1.01
HDAC11-204ENST00000404040 SBK1Q52WX2 424 aa21.34■■□□□ 1.01
HDAC11-204ENST00000404040 MFSD5Q6N075 450 aa21.34■■□□□ 1.01
HDAC11-204ENST00000404040 PRPF38AQ8NAV1 312 aaKnown RBP21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms