RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 PPP2R5BQ15173 497 aa38.73■■■■□ 3.79
CSNK1E-204ENST00000403904 CHURC1Q8WUH1 139 aa38.73■■■■□ 3.79
CSNK1E-204ENST00000403904 ASCC2Q9H1I8 757 aaPredicted RBP38.73■■■■□ 3.79
CSNK1E-204ENST00000403904 CCDC196A0A1B0GTZ2 297 aa38.72■■■■□ 3.79
CSNK1E-204ENST00000403904 IRX3P78415 501 aaPredicted RBP38.72■■■■□ 3.79
CSNK1E-204ENST00000403904 TMTC3Q6ZXV5 915 aa38.72■■■■□ 3.79
CSNK1E-204ENST00000403904 CCDC82Q8N4S0 544 aa38.72■■■■□ 3.79
CSNK1E-204ENST00000403904 GTF3C6Q969F1 213 aa38.72■■■■□ 3.79
CSNK1E-204ENST00000403904 KIFC2Q96AC6 838 aa38.72■■■■□ 3.79
CSNK1E-204ENST00000403904 SH2B1Q9NRF2 756 aaPredicted RBP38.72■■■■□ 3.79
CSNK1E-204ENST00000403904 MAP2K2P36507 400 aa38.71■■■■□ 3.79
CSNK1E-204ENST00000403904 GNAQP50148 359 aa38.71■■■■□ 3.79
CSNK1E-204ENST00000403904 COG2Q14746 738 aa38.71■■■■□ 3.79
CSNK1E-204ENST00000403904 BTNL9Q6UXG8 535 aa38.71■■■■□ 3.79
CSNK1E-204ENST00000403904 SRBD1Q8N5C6 995 aaKnown RBP38.71■■■■□ 3.79
CSNK1E-204ENST00000403904 SLF1Q9BQI6 1058 aa38.71■■■■□ 3.79
CSNK1E-204ENST00000403904 SLC45A1Q9Y2W3 748 aa38.71■■■■□ 3.79
CSNK1E-204ENST00000403904 PLA2G6O60733 806 aa38.7■■■■□ 3.79
CSNK1E-204ENST00000403904 OSBPP22059 807 aa38.7■■■■□ 3.79
CSNK1E-204ENST00000403904 FAM160B2Q86V87 743 aa38.7■■■■□ 3.79
CSNK1E-204ENST00000403904 ST3GAL1Q11201 340 aa38.7■■■■□ 3.79
CSNK1E-204ENST00000403904 SLC35G1Q2M3R5 365 aa38.7■■■■□ 3.79
CSNK1E-204ENST00000403904 PRPF38AQ8NAV1 312 aaKnown RBP38.7■■■■□ 3.79
CSNK1E-204ENST00000403904 P2RX7Q99572 595 aaKnown RBP38.7■■■■□ 3.79
CSNK1E-204ENST00000403904 PPP1R9AQ9ULJ8 1098 aa38.7■■■■□ 3.79
CSNK1E-204ENST00000403904 CYP2C8P10632 490 aa38.69■■■■□ 3.78
CSNK1E-204ENST00000403904 SYDE2Q5VT97 1194 aa38.69■■■■□ 3.78
CSNK1E-204ENST00000403904 LZTS2Q9BRK4 669 aa38.69■■■■□ 3.78
CSNK1E-204ENST00000403904 VAT1LQ9HCJ6 419 aa38.69■■■■□ 3.78
CSNK1E-204ENST00000403904 PRR12Q9ULL5 1215 aa38.69■■■■□ 3.78
CSNK1E-204ENST00000403904 CYTH3O43739 400 aa38.68■■■■□ 3.78
CSNK1E-204ENST00000403904 DSG3P32926 999 aa38.68■■■■□ 3.78
CSNK1E-204ENST00000403904 OTUD7BQ6GQQ9 843 aa38.68■■■■□ 3.78
CSNK1E-204ENST00000403904 CCDC83Q8IWF9 413 aa38.68■■■■□ 3.78
CSNK1E-204ENST00000403904 REM2Q8IYK8 340 aaPredicted RBP38.68■■■■□ 3.78
CSNK1E-204ENST00000403904 ADGRF4Q8IZF3 695 aa38.68■■■■□ 3.78
CSNK1E-204ENST00000403904 HOXC10Q9NYD6 342 aa38.68■■■■□ 3.78
CSNK1E-204ENST00000403904 PNMA3Q9UL41 463 aa38.68■■■■□ 3.78
CSNK1E-204ENST00000403904 CPLX1O14810 134 aa38.67■■■■□ 3.78
CSNK1E-204ENST00000403904 DHX16O60231 1041 aaKnown RBP38.67■■■■□ 3.78
CSNK1E-204ENST00000403904 HSCBQ8IWL3 235 aa38.67■■■■□ 3.78
CSNK1E-204ENST00000403904 ATG4CQ96DT6 458 aa38.67■■■■□ 3.78
CSNK1E-204ENST00000403904 K7ELQ4 463 aaPredicted RBP38.66■■■■□ 3.78
CSNK1E-204ENST00000403904 PPFIA3O75145 1194 aa38.66■■■■□ 3.78
CSNK1E-204ENST00000403904 NTRK3Q16288 839 aa38.66■■■■□ 3.78
CSNK1E-204ENST00000403904 SPDYE16A6NNV3 312 aaPredicted RBP38.65■■■■□ 3.78
CSNK1E-204ENST00000403904 DTNBO60941 627 aa38.65■■■■□ 3.78
CSNK1E-204ENST00000403904 FUT2Q10981 343 aa38.65■■■■□ 3.78
CSNK1E-204ENST00000403904 ZCCHC17Q9NP64 241 aaKnown RBP38.65■■■■□ 3.78
CSNK1E-204ENST00000403904 THSD7BQ9C0I4 1608 aa38.65■■■■□ 3.78
CSNK1E-204ENST00000403904 SNAP25P60880 206 aa38.65■■■■□ 3.78
CSNK1E-204ENST00000403904 HERVK_113P62684 666 aa38.65■■■■□ 3.78
CSNK1E-204ENST00000403904 SPZ1Q9BXG8 430 aa38.65■■■■□ 3.78
CSNK1E-204ENST00000403904 RIOX1Q9H6W3 641 aa38.65■■■■□ 3.78
CSNK1E-204ENST00000403904 JMJD4Q9H9V9 463 aa38.65■■■■□ 3.78
CSNK1E-204ENST00000403904 PIBF1Q8WXW3 757 aa38.64■■■■□ 3.78
CSNK1E-204ENST00000403904 MYPNQ86TC9 1320 aa38.64■■■■□ 3.78
CSNK1E-204ENST00000403904 SMARCA1P28370 1054 aa38.63■■■■□ 3.77
CSNK1E-204ENST00000403904 PHKBQ93100 1093 aa38.63■■■■□ 3.77
CSNK1E-204ENST00000403904 PARK7Q99497 189 aaKnown RBP38.63■■■■□ 3.77
CSNK1E-204ENST00000403904 CNTNAP5Q8WYK1 1306 aa38.63■■■■□ 3.77
CSNK1E-204ENST00000403904 TAF1CQ15572 869 aaPredicted RBP38.62■■■■□ 3.77
CSNK1E-204ENST00000403904 CPLX2Q6PUV4 134 aaKnown RBP38.62■■■■□ 3.77
CSNK1E-204ENST00000403904 SMCR8Q8TEV9 937 aaPredicted RBP38.62■■■■□ 3.77
CSNK1E-204ENST00000403904 ADAMTS5Q9UNA0 930 aa38.62■■■■□ 3.77
CSNK1E-204ENST00000403904 COL11A1P12107 1806 aaPredicted RBP38.62■■■■□ 3.77
CSNK1E-204ENST00000403904 VWA5AO00534 786 aa38.61■■■■□ 3.77
CSNK1E-204ENST00000403904 CTDNEP1O95476 244 aa38.61■■■■□ 3.77
CSNK1E-204ENST00000403904 IFNAR1P17181 557 aa38.61■■■■□ 3.77
CSNK1E-204ENST00000403904 POTEEQ6S8J3 1075 aa38.61■■■■□ 3.77
CSNK1E-204ENST00000403904 HOMER1Q86YM7 354 aa38.61■■■■□ 3.77
CSNK1E-204ENST00000403904 DNAJC5GQ8N7S2 189 aa38.61■■■■□ 3.77
CSNK1E-204ENST00000403904 RBM19Q9Y4C8 960 aaKnown RBP38.61■■■■□ 3.77
CSNK1E-204ENST00000403904 hCG_1642624A0A1W2PR95 340 aa38.6■■■■□ 3.77
CSNK1E-204ENST00000403904 PIGSQ96S52 555 aa38.6■■■■□ 3.77
CSNK1E-204ENST00000403904 SLC38A10Q9HBR0 1119 aa38.6■■■■□ 3.77
CSNK1E-204ENST00000403904 MYH6P13533 1939 aa38.59■■■■□ 3.77
CSNK1E-204ENST00000403904 RANBP17Q9H2T7 1088 aaKnown RBP38.59■■■■□ 3.77
CSNK1E-204ENST00000403904 V9GY48 417 aaPredicted RBP38.59■■■■□ 3.77
CSNK1E-204ENST00000403904 PEX10O60683 326 aa38.58■■■■□ 3.77
CSNK1E-204ENST00000403904 ALDH1A1P00352 501 aa38.58■■■■□ 3.77
CSNK1E-204ENST00000403904 CDC37Q16543 378 aaPredicted RBP38.58■■■■□ 3.77
CSNK1E-204ENST00000403904 LBX2Q6XYB7 198 aa38.58■■■■□ 3.77
CSNK1E-204ENST00000403904 MTMR8Q96EF0 704 aa38.58■■■■□ 3.77
CSNK1E-204ENST00000403904 SLC26A6Q9BXS9 759 aa38.58■■■■□ 3.77
CSNK1E-204ENST00000403904 ZBED4O75132 1171 aa38.57■■■■□ 3.77
CSNK1E-204ENST00000403904 CDKL5O76039 1030 aa38.57■■■■□ 3.77
CSNK1E-204ENST00000403904 CCDC174Q6PII3 467 aa38.57■■■■□ 3.77
CSNK1E-204ENST00000403904 NSUN7Q8NE18 718 aaKnown RBP38.57■■■■□ 3.77
CSNK1E-204ENST00000403904 RRP36Q96EU6 259 aaKnown RBP38.57■■■■□ 3.77
CSNK1E-204ENST00000403904 A0A0G2JMZ2 1700 aa38.57■■■■□ 3.76
CSNK1E-204ENST00000403904 PAGR1Q9BTK6 254 aa38.57■■■■□ 3.76
CSNK1E-204ENST00000403904 CTDP1Q9Y5B0 961 aaPredicted RBP38.57■■■■□ 3.76
CSNK1E-204ENST00000403904 JAK2O60674 1132 aa38.56■■■■□ 3.76
CSNK1E-204ENST00000403904 FDX1P10109 184 aa38.56■■■■□ 3.76
CSNK1E-204ENST00000403904 CRHR2Q13324 411 aa38.56■■■■□ 3.76
CSNK1E-204ENST00000403904 CUL4AQ13619 759 aa38.56■■■■□ 3.76
CSNK1E-204ENST00000403904 QRICH1Q2TAL8 776 aa38.56■■■■□ 3.76
CSNK1E-204ENST00000403904 REPS2Q8NFH8 660 aa38.56■■■■□ 3.76
CSNK1E-204ENST00000403904 RBPJLQ9UBG7 517 aa38.56■■■■□ 3.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms