RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 MCMBPQ9BTE3 642 aa5.62□□□□□ -1.51
HMGB1P17-201ENST00000403495 CHST7Q9NS84 486 aa5.62□□□□□ -1.51
HMGB1P17-201ENST00000403495 IFT57Q9NWB7 429 aa5.62□□□□□ -1.51
HMGB1P17-201ENST00000403495 MRPS23Q9Y3D9 190 aaKnown RBP5.62□□□□□ -1.51
HMGB1P17-201ENST00000403495 FHOD1Q9Y613 1164 aa5.62□□□□□ -1.51
HMGB1P17-201ENST00000403495 CAPN6Q9Y6Q1 641 aa5.62□□□□□ -1.51
HMGB1P17-201ENST00000403495 WDR64B1ANS9 1081 aa5.61□□□□□ -1.51
HMGB1P17-201ENST00000403495 RNF225M0QZC1 329 aaPredicted RBP5.61□□□□□ -1.51
HMGB1P17-201ENST00000403495 STXBP3O00186 592 aa5.61□□□□□ -1.51
HMGB1P17-201ENST00000403495 SIGLEC6O43699 453 aa5.61□□□□□ -1.51
HMGB1P17-201ENST00000403495 CTSKP43235 329 aa5.61□□□□□ -1.51
HMGB1P17-201ENST00000403495 KCNJ6P48051 423 aa5.61□□□□□ -1.51
HMGB1P17-201ENST00000403495 TCEA2Q15560 299 aa5.61□□□□□ -1.51
HMGB1P17-201ENST00000403495 PLA2G4EQ3MJ16 856 aa5.61□□□□□ -1.51
HMGB1P17-201ENST00000403495 DALRD3Q5D0E6 543 aaKnown RBP5.61□□□□□ -1.51
HMGB1P17-201ENST00000403495 NSMFQ6X4W1 530 aa5.61□□□□□ -1.51
HMGB1P17-201ENST00000403495 MFSD4AQ8N468 514 aa5.61□□□□□ -1.51
HMGB1P17-201ENST00000403495 GIMAP7Q8NHV1 300 aa5.61□□□□□ -1.51
HMGB1P17-201ENST00000403495 SHKBP1Q8TBC3 707 aa5.61□□□□□ -1.51
HMGB1P17-201ENST00000403495 CLUHP3Q96NS8 147 aa5.61□□□□□ -1.51
HMGB1P17-201ENST00000403495 SLC26A8Q96RN1 970 aa5.61□□□□□ -1.51
HMGB1P17-201ENST00000403495 FEZ1Q99689 392 aa5.61□□□□□ -1.51
HMGB1P17-201ENST00000403495 DHRS4Q9BTZ2 278 aa5.61□□□□□ -1.51
HMGB1P17-201ENST00000403495 GTF2IRD1Q9UHL9 959 aa5.61□□□□□ -1.51
HMGB1P17-201ENST00000403495 FAM155AB1AL88 458 aaPredicted RBP5.6□□□□□ -1.51
HMGB1P17-201ENST00000403495 DLX3O60479 287 aa5.6□□□□□ -1.51
HMGB1P17-201ENST00000403495 CAPNS1P04632 268 aa5.6□□□□□ -1.51
HMGB1P17-201ENST00000403495 CD3EP07766 207 aa5.6□□□□□ -1.51
HMGB1P17-201ENST00000403495 SNRPB2P08579 225 aaKnown RBP5.6□□□□□ -1.51
HMGB1P17-201ENST00000403495 ECI1P42126 302 aa5.6□□□□□ -1.51
HMGB1P17-201ENST00000403495 CYP4F3Q08477 520 aa5.6□□□□□ -1.51
HMGB1P17-201ENST00000403495 NFIAQ12857 509 aa5.6□□□□□ -1.51
HMGB1P17-201ENST00000403495 PABPC4Q13310 644 aaKnown RBP eCLIP5.6□□□□□ -1.51
HMGB1P17-201ENST00000403495 CLEC16AQ2KHT3 1053 aa5.6□□□□□ -1.51
HMGB1P17-201ENST00000403495 CYP27C1Q4G0S4 372 aa5.6□□□□□ -1.51
HMGB1P17-201ENST00000403495 RNF187Q5TA31 235 aaPredicted RBP5.6□□□□□ -1.51
HMGB1P17-201ENST00000403495 RNF43Q68DV7 783 aa5.6□□□□□ -1.51
HMGB1P17-201ENST00000403495 TMEM145Q8NBT3 493 aa5.6□□□□□ -1.51
HMGB1P17-201ENST00000403495 SYTL5Q8TDW5 730 aaPredicted RBP5.6□□□□□ -1.51
HMGB1P17-201ENST00000403495 RCC1LQ96I51 464 aaKnown RBP5.6□□□□□ -1.51
HMGB1P17-201ENST00000403495 HDAC8Q9BY41 377 aa5.6□□□□□ -1.51
HMGB1P17-201ENST00000403495 SLKQ9H2G2 1235 aaPredicted RBP5.6□□□□□ -1.51
HMGB1P17-201ENST00000403495 NCOA5Q9HCD5 579 aaKnown RBP5.6□□□□□ -1.51
HMGB1P17-201ENST00000403495 KCNH3Q9ULD8 1083 aa5.6□□□□□ -1.51
HMGB1P17-201ENST00000403495 GNAT3A8MTJ3 354 aa5.59□□□□□ -1.51
HMGB1P17-201ENST00000403495 H3BS24 57 aa5.59□□□□□ -1.51
HMGB1P17-201ENST00000403495 ZNF865P0CJ78 1059 aaPredicted RBP5.59□□□□□ -1.51
HMGB1P17-201ENST00000403495 IFNGR1P15260 489 aa5.59□□□□□ -1.51
HMGB1P17-201ENST00000403495 NCLP19338 710 aaKnown RBP5.59□□□□□ -1.51
HMGB1P17-201ENST00000403495 OXCT1P55809 520 aa5.59□□□□□ -1.51
HMGB1P17-201ENST00000403495 NTRK3Q16288 839 aa5.59□□□□□ -1.51
HMGB1P17-201ENST00000403495 PTPROQ16827 1216 aa5.59□□□□□ -1.51
HMGB1P17-201ENST00000403495 NKPD1Q17RQ9 610 aa5.59□□□□□ -1.51
HMGB1P17-201ENST00000403495 ARHGAP27Q6ZUM4 889 aa5.59□□□□□ -1.51
HMGB1P17-201ENST00000403495 ASCC2Q9H1I8 757 aaPredicted RBP5.59□□□□□ -1.51
HMGB1P17-201ENST00000403495 DUSP15Q9H1R2 295 aaPredicted RBP5.59□□□□□ -1.51
HMGB1P17-201ENST00000403495 DNAJC6O75061 913 aa5.58□□□□□ -1.52
HMGB1P17-201ENST00000403495 GDF11O95390 407 aa5.58□□□□□ -1.52
HMGB1P17-201ENST00000403495 C6orf222P0C671 652 aaPredicted RBP5.58□□□□□ -1.52
HMGB1P17-201ENST00000403495 FGFR1P11362 822 aa5.58□□□□□ -1.52
HMGB1P17-201ENST00000403495 HSP90B1P14625 803 aaKnown RBP5.58□□□□□ -1.52
HMGB1P17-201ENST00000403495 SDSP20132 328 aa5.58□□□□□ -1.52
HMGB1P17-201ENST00000403495 KIR3DL1P43629 444 aa5.58□□□□□ -1.52
HMGB1P17-201ENST00000403495 MASP1P48740 699 aa5.58□□□□□ -1.52
HMGB1P17-201ENST00000403495 GFRA1P56159 465 aa5.58□□□□□ -1.52
HMGB1P17-201ENST00000403495 AMPD2Q01433 879 aa5.58□□□□□ -1.52
HMGB1P17-201ENST00000403495 SCRN1Q12765 414 aa5.58□□□□□ -1.52
HMGB1P17-201ENST00000403495 KCNMA1Q12791 1236 aa5.58□□□□□ -1.52
HMGB1P17-201ENST00000403495 LONRF2Q1L5Z9 754 aa5.58□□□□□ -1.52
HMGB1P17-201ENST00000403495 DUSP27Q5VZP5 1158 aa5.58□□□□□ -1.52
HMGB1P17-201ENST00000403495 DENND5AQ6IQ26 1287 aa5.58□□□□□ -1.52
HMGB1P17-201ENST00000403495 POMZP3Q6PJE2 187 aa5.58□□□□□ -1.52
HMGB1P17-201ENST00000403495 SCUBE1Q8IWY4 988 aa5.58□□□□□ -1.52
HMGB1P17-201ENST00000403495 PLD6Q8N2A8 252 aaKnown RBP5.58□□□□□ -1.52
HMGB1P17-201ENST00000403495 UBR7Q8N806 425 aa5.58□□□□□ -1.52
HMGB1P17-201ENST00000403495 TCTN2Q96GX1 697 aa5.58□□□□□ -1.52
HMGB1P17-201ENST00000403495 HSPA12BQ96MM6 686 aa5.58□□□□□ -1.52
HMGB1P17-201ENST00000403495 IPO9Q96P70 1041 aaKnown RBP5.58□□□□□ -1.52
HMGB1P17-201ENST00000403495 OSBPL1AQ9BXW6 950 aa5.58□□□□□ -1.52
HMGB1P17-201ENST00000403495 FAM126AQ9BYI3 521 aaPredicted RBP5.58□□□□□ -1.52
HMGB1P17-201ENST00000403495 GPRC5CQ9NQ84 441 aa5.58□□□□□ -1.52
HMGB1P17-201ENST00000403495 ZSWIM5Q9P217 1185 aa5.58□□□□□ -1.52
HMGB1P17-201ENST00000403495 NDOR1Q9UHB4 597 aa5.58□□□□□ -1.52
HMGB1P17-201ENST00000403495 PLAGL2Q9UPG8 496 aa5.58□□□□□ -1.52
HMGB1P17-201ENST00000403495 DIS3Q9Y2L1 958 aaKnown RBP5.58□□□□□ -1.52
HMGB1P17-201ENST00000403495 TRAF6Q9Y4K3 522 aa5.58□□□□□ -1.52
HMGB1P17-201ENST00000403495 ST14Q9Y5Y6 855 aa5.58□□□□□ -1.52
HMGB1P17-201ENST00000403495 A0A087WZG4 1122 aa5.57□□□□□ -1.52
HMGB1P17-201ENST00000403495 IGF2BP3O00425 579 aaKnown RBP eCLIP5.57□□□□□ -1.52
HMGB1P17-201ENST00000403495 FKTNO75072 461 aa5.57□□□□□ -1.52
HMGB1P17-201ENST00000403495 FSTP19883 344 aa5.57□□□□□ -1.52
HMGB1P17-201ENST00000403495 SUMO1P63165 101 aaKnown RBP5.57□□□□□ -1.52
HMGB1P17-201ENST00000403495 ZPBP2Q6X784 338 aa5.57□□□□□ -1.52
HMGB1P17-201ENST00000403495 USP53Q70EK8 1073 aa5.57□□□□□ -1.52
HMGB1P17-201ENST00000403495 SPACA3Q8IXA5 215 aa5.57□□□□□ -1.52
HMGB1P17-201ENST00000403495 NIM1KQ8IY84 436 aa5.57□□□□□ -1.52
HMGB1P17-201ENST00000403495 SLC7A14Q8TBB6 771 aa5.57□□□□□ -1.52
HMGB1P17-201ENST00000403495 DBNDD2Q9BQY9 259 aa5.57□□□□□ -1.52
HMGB1P17-201ENST00000403495 NKX2-4Q9H2Z4 354 aa5.57□□□□□ -1.52
HMGB1P17-201ENST00000403495 SLC52A2Q9HAB3 445 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms