RNA–Protein interactions for RNA: ENST00000403441.1

PRAME-204, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 3

Gene PRAME, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-204ENST00000403441 CDX2Q99626 313 aaPredicted RBP14.75□□□□□ -0.05
PRAME-204ENST00000403441 ZNF287Q9HBT7 754 aa14.75□□□□□ -0.05
PRAME-204ENST00000403441 GREB1LQ9C091 1923 aaPredicted RBP14.74□□□□□ -0.05
PRAME-204ENST00000403441 SYNGAP1Q96PV0 1343 aa14.74□□□□□ -0.05
PRAME-204ENST00000403441 ZNF865P0CJ78 1059 aaPredicted RBP14.74□□□□□ -0.05
PRAME-204ENST00000403441 RAG1P15918 1043 aa14.74□□□□□ -0.05
PRAME-204ENST00000403441 RASA1P20936 1047 aa14.74□□□□□ -0.05
PRAME-204ENST00000403441 PRPF38AQ8NAV1 312 aaKnown RBP14.74□□□□□ -0.05
PRAME-204ENST00000403441 MAFAQ8NHW3 353 aaPredicted RBP14.74□□□□□ -0.05
PRAME-204ENST00000403441 LENG1Q96BZ8 264 aaPredicted RBP14.74□□□□□ -0.05
PRAME-204ENST00000403441 STRBPQ96SI9 672 aaKnown RBP14.74□□□□□ -0.05
PRAME-204ENST00000403441 NUP88Q99567 741 aaPredicted RBP14.74□□□□□ -0.05
PRAME-204ENST00000403441 TSEN34Q9BSV6 310 aaKnown RBP14.74□□□□□ -0.05
PRAME-204ENST00000403441 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.74□□□□□ -0.05
PRAME-204ENST00000403441 SEMA6BQ9H3T3 888 aa14.74□□□□□ -0.05
PRAME-204ENST00000403441 ECHDC1Q9NTX5 307 aa14.74□□□□□ -0.05
PRAME-204ENST00000403441 NYAP2Q9P242 653 aa14.74□□□□□ -0.05
PRAME-204ENST00000403441 FAM184BQ9ULE4 1060 aa14.74□□□□□ -0.05
PRAME-204ENST00000403441 SYNRGQ9UMZ2 1314 aa14.73□□□□□ -0.05
PRAME-204ENST00000403441 MOXD2PA6NHM9 499 aa14.73□□□□□ -0.05
PRAME-204ENST00000403441 DCDC2CA8MYV0 355 aa14.73□□□□□ -0.05
PRAME-204ENST00000403441 MINDY4BA8MYZ0 360 aa14.73□□□□□ -0.05
PRAME-204ENST00000403441 KIAA0355O15063 1070 aa14.73□□□□□ -0.05
PRAME-204ENST00000403441 ZBED4O75132 1171 aa14.73□□□□□ -0.05
PRAME-204ENST00000403441 NDUFB10O96000 172 aa14.73□□□□□ -0.05
PRAME-204ENST00000403441 TDO2P48775 406 aa14.73□□□□□ -0.05
PRAME-204ENST00000403441 ACLYP53396 1101 aa14.73□□□□□ -0.05
PRAME-204ENST00000403441 FPGSQ05932 587 aa14.73□□□□□ -0.05
PRAME-204ENST00000403441 STK11IPQ8N1F8 1099 aa14.73□□□□□ -0.05
PRAME-204ENST00000403441 COL25A1Q9BXS0 654 aaPredicted RBP14.73□□□□□ -0.05
PRAME-204ENST00000403441 STARD7Q9NQZ5 370 aa14.73□□□□□ -0.05
PRAME-204ENST00000403441 TMEM39AQ9NV64 488 aa14.73□□□□□ -0.05
PRAME-204ENST00000403441 ZHX1Q9UKY1 873 aaPredicted RBP14.73□□□□□ -0.05
PRAME-204ENST00000403441 SMCHD1A6NHR9 2005 aa14.73□□□□□ -0.05
PRAME-204ENST00000403441 SALL3Q9BXA9 1300 aa14.72□□□□□ -0.05
PRAME-204ENST00000403441 TMEM265A0A087WTH1 108 aa14.72□□□□□ -0.05
PRAME-204ENST00000403441 GSG1L2A8MUP6 293 aa14.72□□□□□ -0.05
PRAME-204ENST00000403441 F5H6K3 240 aa14.72□□□□□ -0.05
PRAME-204ENST00000403441 ATP2A1O14983 1001 aa14.72□□□□□ -0.05
PRAME-204ENST00000403441 SMARCA5O60264 1052 aaPredicted RBP14.72□□□□□ -0.05
PRAME-204ENST00000403441 ADAMTS4O75173 837 aa14.72□□□□□ -0.05
PRAME-204ENST00000403441 ZFYP08048 801 aaPredicted RBP14.72□□□□□ -0.05
PRAME-204ENST00000403441 GNAT2P19087 354 aa14.72□□□□□ -0.05
PRAME-204ENST00000403441 SLC4A3P48751 1232 aa14.72□□□□□ -0.05
PRAME-204ENST00000403441 KLRC3Q07444 240 aa14.72□□□□□ -0.05
PRAME-204ENST00000403441 ANKRD33Q7Z3H0 272 aa14.72□□□□□ -0.05
PRAME-204ENST00000403441 ZNF467Q7Z7K2 595 aaPredicted RBP14.72□□□□□ -0.05
PRAME-204ENST00000403441 KBTBD3Q8NAB2 608 aa14.72□□□□□ -0.05
PRAME-204ENST00000403441 APPBP2Q92624 585 aa14.72□□□□□ -0.05
PRAME-204ENST00000403441 KIFC2Q96AC6 838 aa14.72□□□□□ -0.05
PRAME-204ENST00000403441 CLIP2Q9UDT6 1046 aa14.72□□□□□ -0.05
PRAME-204ENST00000403441 FBXO40Q9UH90 709 aa14.72□□□□□ -0.05
PRAME-204ENST00000403441 EYSQ5T1H1 3165 aa14.71□□□□□ -0.05
PRAME-204ENST00000403441 MROH7Q68CQ1 1323 aa14.71□□□□□ -0.05
PRAME-204ENST00000403441 DNAJC25-GNG10A0A024R161 153 aa14.71□□□□□ -0.05
PRAME-204ENST00000403441 FOSL2P15408 326 aa14.71□□□□□ -0.05
PRAME-204ENST00000403441 ITGB8P26012 769 aa14.71□□□□□ -0.05
PRAME-204ENST00000403441 LRRFIP1Q32MZ4 808 aaKnown RBP14.71□□□□□ -0.05
PRAME-204ENST00000403441 MAMDC4Q6UXC1 1216 aa14.71□□□□□ -0.05
PRAME-204ENST00000403441 ZNF444Q8N0Y2 327 aaPredicted RBP14.71□□□□□ -0.05
PRAME-204ENST00000403441 CPXCR1Q8N123 301 aa14.71□□□□□ -0.05
PRAME-204ENST00000403441 MYLIPQ8WY64 445 aa14.71□□□□□ -0.05
PRAME-204ENST00000403441 TOX2Q96NM4 488 aa14.71□□□□□ -0.05
PRAME-204ENST00000403441 TTYH1Q9H313 450 aaPredicted RBP14.71□□□□□ -0.05
PRAME-204ENST00000403441 SPC25Q9HBM1 224 aa14.71□□□□□ -0.05
PRAME-204ENST00000403441 FEM1BQ9UK73 627 aa14.71□□□□□ -0.05
PRAME-204ENST00000403441 SYNPO2Q9UMS6 1093 aa14.71□□□□□ -0.05
PRAME-204ENST00000403441 CDH23Q9H251 3354 aa14.71□□□□□ -0.06
PRAME-204ENST00000403441 RNF113AO15541 343 aaKnown RBP14.7□□□□□ -0.06
PRAME-204ENST00000403441 GPAA1O43292 621 aa14.7□□□□□ -0.06
PRAME-204ENST00000403441 DUSP11O75319 330 aaKnown RBP14.7□□□□□ -0.06
PRAME-204ENST00000403441 SNAI1O95863 264 aaPredicted RBP14.7□□□□□ -0.06
PRAME-204ENST00000403441 APPP05067 770 aa14.7□□□□□ -0.06
PRAME-204ENST00000403441 KCNA10Q16322 511 aa14.7□□□□□ -0.06
PRAME-204ENST00000403441 CCDC174Q6PII3 467 aa14.7□□□□□ -0.06
PRAME-204ENST00000403441 ANKRD35Q8N283 1001 aa14.7□□□□□ -0.06
PRAME-204ENST00000403441 PCSK9Q8NBP7 692 aaKnown RBP14.7□□□□□ -0.06
PRAME-204ENST00000403441 OSBP2Q969R2 916 aa14.7□□□□□ -0.06
PRAME-204ENST00000403441 GLT1D1Q96MS3 346 aa14.7□□□□□ -0.06
PRAME-204ENST00000403441 SLC38A10Q9HBR0 1119 aa14.7□□□□□ -0.06
PRAME-204ENST00000403441 ISY1Q9ULR0 285 aaKnown RBP14.7□□□□□ -0.06
PRAME-204ENST00000403441 RIPK3Q9Y572 518 aa14.7□□□□□ -0.06
PRAME-204ENST00000403441 SUPT16HQ9Y5B9 1047 aaKnown RBP14.7□□□□□ -0.06
PRAME-204ENST00000403441 MYH4Q9Y623 1939 aa14.69□□□□□ -0.06
PRAME-204ENST00000403441 IGKV6D-41A0A0C4DH26 115 aa14.69□□□□□ -0.06
PRAME-204ENST00000403441 TTLL1O95922 423 aa14.69□□□□□ -0.06
PRAME-204ENST00000403441 C6orf222P0C671 652 aaPredicted RBP14.69□□□□□ -0.06
PRAME-204ENST00000403441 CST5P28325 142 aaPredicted RBP14.69□□□□□ -0.06
PRAME-204ENST00000403441 OAZ1P54368 228 aa14.69□□□□□ -0.06
PRAME-204ENST00000403441 EPHB4P54760 987 aa14.69□□□□□ -0.06
PRAME-204ENST00000403441 FAAP100Q0VG06 881 aa14.69□□□□□ -0.06
PRAME-204ENST00000403441 ACVR2BQ13705 512 aa14.69□□□□□ -0.06
PRAME-204ENST00000403441 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.69□□□□□ -0.06
PRAME-204ENST00000403441 SMC5Q8IY18 1101 aa14.69□□□□□ -0.06
PRAME-204ENST00000403441 GMCL1P1Q8NEA9 526 aa14.69□□□□□ -0.06
PRAME-204ENST00000403441 KLHDC9Q8NEP7 349 aa14.69□□□□□ -0.06
PRAME-204ENST00000403441 CHST13Q8NET6 341 aa14.69□□□□□ -0.06
PRAME-204ENST00000403441 EXOC6Q8TAG9 804 aa14.69□□□□□ -0.06
PRAME-204ENST00000403441 CEP95Q96GE4 821 aa14.69□□□□□ -0.06
PRAME-204ENST00000403441 NACAP1Q9BZK3 213 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms