RNA–Protein interactions for RNA: ENST00000402434.6

RTN4-207, Transcript of reticulon 4, humanhuman

TSL 5 BASIC

Gene RTN4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-207ENST00000402434 UBAC1Q9BSL1 405 aa22.56■■□□□ 1.2
RTN4-207ENST00000402434 KIAA0100Q14667 2235 aaKnown RBP22.56■■□□□ 1.2
RTN4-207ENST00000402434 SLC15A5A6NIM6 579 aa22.55■■□□□ 1.2
RTN4-207ENST00000402434 PDHBP11177 359 aa22.55■■□□□ 1.2
RTN4-207ENST00000402434 SEC23AQ15436 765 aa22.55■■□□□ 1.2
RTN4-207ENST00000402434 CREB3L3Q68CJ9 461 aa22.55■■□□□ 1.2
RTN4-207ENST00000402434 RALYLQ86SE5 291 aaKnown RBP22.55■■□□□ 1.2
RTN4-207ENST00000402434 ZBED4O75132 1171 aa22.54■■□□□ 1.2
RTN4-207ENST00000402434 OAZ1P54368 228 aa22.54■■□□□ 1.2
RTN4-207ENST00000402434 GRB14Q14449 540 aa22.54■■□□□ 1.2
RTN4-207ENST00000402434 WDR78Q5VTH9 848 aa22.54■■□□□ 1.2
RTN4-207ENST00000402434 BTNL9Q6UXG8 535 aa22.54■■□□□ 1.2
RTN4-207ENST00000402434 PNMA1Q8ND90 353 aa22.54■■□□□ 1.2
RTN4-207ENST00000402434 CHMP4CQ96CF2 233 aa22.54■■□□□ 1.2
RTN4-207ENST00000402434 TEX13BQ9BXU2 312 aa22.54■■□□□ 1.2
RTN4-207ENST00000402434 CWC22Q9HCG8 908 aaKnown RBP22.54■■□□□ 1.2
RTN4-207ENST00000402434 MTMR7Q9Y216 660 aa22.54■■□□□ 1.2
RTN4-207ENST00000402434 IVNS1ABPQ9Y6Y0 642 aa22.54■■□□□ 1.2
RTN4-207ENST00000402434 ELNP15502 786 aa22.54■■□□□ 1.2
RTN4-207ENST00000402434 COPB2P35606 906 aa22.54■■□□□ 1.2
RTN4-207ENST00000402434 RGS2P41220 211 aa22.54■■□□□ 1.2
RTN4-207ENST00000402434 MAP2K5Q13163 448 aa22.54■■□□□ 1.2
RTN4-207ENST00000402434 ABRAQ8N0Z2 381 aa22.54■■□□□ 1.2
RTN4-207ENST00000402434 KAT14Q9H8E8 782 aa22.54■■□□□ 1.2
RTN4-207ENST00000402434 ISY1Q9ULR0 285 aaKnown RBP22.54■■□□□ 1.2
RTN4-207ENST00000402434 HOXC6P09630 235 aa22.53■■□□□ 1.2
RTN4-207ENST00000402434 ZNF543Q08ER8 600 aa22.53■■□□□ 1.2
RTN4-207ENST00000402434 CCDC96Q2M329 555 aa22.53■■□□□ 1.2
RTN4-207ENST00000402434 NCAPG2Q86XI2 1143 aa22.53■■□□□ 1.2
RTN4-207ENST00000402434 MB21D2Q8IYB1 491 aaPredicted RBP22.53■■□□□ 1.2
RTN4-207ENST00000402434 PRR12Q9ULL5 1215 aa22.53■■□□□ 1.2
RTN4-207ENST00000402434 CYP2B6P20813 491 aa22.52■■□□□ 1.2
RTN4-207ENST00000402434 IKQ13123 557 aaPredicted RBP22.52■■□□□ 1.2
RTN4-207ENST00000402434 GPATCH4Q5T3I0 446 aaKnown RBP22.52■■□□□ 1.2
RTN4-207ENST00000402434 IFIT1BQ5T764 474 aaKnown RBP22.52■■□□□ 1.2
RTN4-207ENST00000402434 RNF20Q5VTR2 975 aa22.52■■□□□ 1.2
RTN4-207ENST00000402434 TTBK2Q6IQ55 1244 aa22.52■■□□□ 1.2
RTN4-207ENST00000402434 ANTXR2P58335 489 aa22.51■■□□□ 1.19
RTN4-207ENST00000402434 TSGA10IPQ3SY00 556 aa22.51■■□□□ 1.19
RTN4-207ENST00000402434 SNRNP48Q6IEG0 339 aaKnown RBP22.51■■□□□ 1.19
RTN4-207ENST00000402434 TRMT44Q8IYL2 757 aaKnown RBP22.51■■□□□ 1.19
RTN4-207ENST00000402434 CPXCR1Q8N123 301 aa22.51■■□□□ 1.19
RTN4-207ENST00000402434 APBA2Q99767 749 aa22.51■■□□□ 1.19
RTN4-207ENST00000402434 BIN2Q9UBW5 565 aaPredicted RBP22.51■■□□□ 1.19
RTN4-207ENST00000402434 RIPK3Q9Y572 518 aa22.51■■□□□ 1.19
RTN4-207ENST00000402434 CTDP1Q9Y5B0 961 aaPredicted RBP22.51■■□□□ 1.19
RTN4-207ENST00000402434 IFIT3O14879 490 aaKnown RBP22.5■■□□□ 1.19
RTN4-207ENST00000402434 HMGCRP04035 888 aa22.5■■□□□ 1.19
RTN4-207ENST00000402434 ADORA2AP29274 412 aa22.5■■□□□ 1.19
RTN4-207ENST00000402434 RGS19P49795 217 aa22.5■■□□□ 1.19
RTN4-207ENST00000402434 SOX10P56693 466 aa22.5■■□□□ 1.19
RTN4-207ENST00000402434 UBXN2AP68543 259 aa22.5■■□□□ 1.19
RTN4-207ENST00000402434 IGDCC4Q8TDY8 1250 aa22.5■■□□□ 1.19
RTN4-207ENST00000402434 TRIB2Q92519 343 aa22.5■■□□□ 1.19
RTN4-207ENST00000402434 MTA3Q9BTC8 594 aa22.5■■□□□ 1.19
RTN4-207ENST00000402434 RAVER2Q9HCJ3 691 aaKnown RBP22.5■■□□□ 1.19
RTN4-207ENST00000402434 GPCPD1Q9NPB8 672 aa22.5■■□□□ 1.19
RTN4-207ENST00000402434 FRMPD2Q68DX3 1309 aaPredicted RBP22.5■■□□□ 1.19
RTN4-207ENST00000402434 REC8O95072 547 aa22.49■■□□□ 1.19
RTN4-207ENST00000402434 INHAP05111 366 aa22.49■■□□□ 1.19
RTN4-207ENST00000402434 FCER1AP12319 257 aa22.49■■□□□ 1.19
RTN4-207ENST00000402434 SLC16A2P36021 539 aa22.49■■□□□ 1.19
RTN4-207ENST00000402434 SART3Q15020 963 aaKnown RBP22.49■■□□□ 1.19
RTN4-207ENST00000402434 MTFR1Q15390 333 aa22.49■■□□□ 1.19
RTN4-207ENST00000402434 CHST3Q7LGC8 479 aa22.49■■□□□ 1.19
RTN4-207ENST00000402434 ZNF536O15090 1300 aa22.49■■□□□ 1.19
RTN4-207ENST00000402434 ZNF236Q9UL36 1845 aa22.49■■□□□ 1.19
RTN4-207ENST00000402434 ERICH2A1L162 156 aa22.48■■□□□ 1.19
RTN4-207ENST00000402434 SYDE2Q5VT97 1194 aa22.48■■□□□ 1.19
RTN4-207ENST00000402434 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.48■■□□□ 1.193e-7■□□□□ 8.1
RTN4-207ENST00000402434 COBLO75128 1261 aa22.47■■□□□ 1.19
RTN4-207ENST00000402434 IGHA2P01877 340 aa22.47■■□□□ 1.19
RTN4-207ENST00000402434 MCM5P33992 734 aa22.47■■□□□ 1.19
RTN4-207ENST00000402434 COL9A3Q14050 684 aaPredicted RBP22.47■■□□□ 1.19
RTN4-207ENST00000402434 CCL14Q16627 93 aa22.47■■□□□ 1.19
RTN4-207ENST00000402434 ASPRV1Q53RT3 343 aa22.47■■□□□ 1.19
RTN4-207ENST00000402434 RASEFQ8IZ41 740 aa22.47■■□□□ 1.19
RTN4-207ENST00000402434 KCNB2Q92953 911 aa22.47■■□□□ 1.19
RTN4-207ENST00000402434 TMEM106CQ9BVX2 250 aa22.47■■□□□ 1.19
RTN4-207ENST00000402434 RANBP17Q9H2T7 1088 aaKnown RBP22.47■■□□□ 1.19
RTN4-207ENST00000402434 POTEFA5A3E0 1075 aa22.47■■□□□ 1.19
RTN4-207ENST00000402434 EPB41L2O43491 1005 aaKnown RBP22.47■■□□□ 1.19
RTN4-207ENST00000402434 MYCP01106 439 aaPredicted RBP22.47■■□□□ 1.19
RTN4-207ENST00000402434 GOLGA8HP0CJ92 632 aa22.47■■□□□ 1.19
RTN4-207ENST00000402434 CCL5P13501 91 aa22.47■■□□□ 1.19
RTN4-207ENST00000402434 ZKSCAN1P17029 563 aaPredicted RBP22.47■■□□□ 1.19
RTN4-207ENST00000402434 KCTD2Q14681 263 aa22.47■■□□□ 1.19
RTN4-207ENST00000402434 WTAPQ15007 396 aa22.47■■□□□ 1.19
RTN4-207ENST00000402434 TMEM67Q5HYA8 995 aa22.47■■□□□ 1.19
RTN4-207ENST00000402434 MAP3K21Q5TCX8 1036 aa22.47■■□□□ 1.19
RTN4-207ENST00000402434 DPP9Q86TI2 863 aa22.47■■□□□ 1.19
RTN4-207ENST00000402434 NPLOC4Q8TAT6 608 aa22.47■■□□□ 1.19
RTN4-207ENST00000402434 AGBL1Q96MI9 1066 aa22.47■■□□□ 1.19
RTN4-207ENST00000402434 MMP19Q99542 508 aa22.47■■□□□ 1.19
RTN4-207ENST00000402434 SENP2Q9HC62 589 aa22.47■■□□□ 1.19
RTN4-207ENST00000402434 ZNFX1Q9P2E3 1918 aaKnown RBP22.46■■□□□ 1.19
RTN4-207ENST00000402434 PRC1O43663 620 aa22.46■■□□□ 1.19
RTN4-207ENST00000402434 HSPA4P34932 840 aa22.46■■□□□ 1.19
RTN4-207ENST00000402434 CHST13Q8NET6 341 aa22.46■■□□□ 1.19
RTN4-207ENST00000402434 UNC93B1Q9H1C4 597 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms