RNA–Protein interactions for RNA: ENST00000401522.7

CHRFAM7A-203, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 1 (best) BASIC

Gene CHRFAM7A, Length 1,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-203ENST00000401522 TACC3Q9Y6A5 838 aa18.2■□□□□ 0.5
CHRFAM7A-203ENST00000401522 IFIT3O14879 490 aaKnown RBP18.19■□□□□ 0.5
CHRFAM7A-203ENST00000401522 RANBP6O60518 1105 aaKnown RBP18.19■□□□□ 0.5
CHRFAM7A-203ENST00000401522 MAP3K10Q02779 954 aa18.19■□□□□ 0.5
CHRFAM7A-203ENST00000401522 PDE4BQ07343 736 aa18.19■□□□□ 0.5
CHRFAM7A-203ENST00000401522 PPP4R3BQ5MIZ7 849 aa18.19■□□□□ 0.5
CHRFAM7A-203ENST00000401522 SHC4Q6S5L8 630 aa18.19■□□□□ 0.5
CHRFAM7A-203ENST00000401522 KRT26Q7Z3Y9 468 aa18.19■□□□□ 0.5
CHRFAM7A-203ENST00000401522 LDHDQ86WU2 507 aa18.19■□□□□ 0.5
CHRFAM7A-203ENST00000401522 CDAN1Q8IWY9 1227 aa18.19■□□□□ 0.5
CHRFAM7A-203ENST00000401522 DYNLL2Q96FJ2 89 aa18.19■□□□□ 0.5
CHRFAM7A-203ENST00000401522 CLEC11AQ9Y240 323 aa18.19■□□□□ 0.5
CHRFAM7A-203ENST00000401522 USP27XA6NNY8 438 aa18.19■□□□□ 0.5
CHRFAM7A-203ENST00000401522 NRDCO43847 1150 aa18.19■□□□□ 0.5
CHRFAM7A-203ENST00000401522 TBC1D12O60347 775 aa18.19■□□□□ 0.5
CHRFAM7A-203ENST00000401522 IFNAR1P17181 557 aa18.19■□□□□ 0.5
CHRFAM7A-203ENST00000401522 ELOA2Q8IYF1 753 aaPredicted RBP18.19■□□□□ 0.5
CHRFAM7A-203ENST00000401522 ARID3AQ99856 593 aa18.19■□□□□ 0.5
CHRFAM7A-203ENST00000401522 ZNF287Q9HBT7 754 aa18.19■□□□□ 0.5
CHRFAM7A-203ENST00000401522 GPBP1L1Q9HC44 474 aaPredicted RBP18.19■□□□□ 0.5
CHRFAM7A-203ENST00000401522 INCENPQ9NQS7 918 aa18.19■□□□□ 0.5
CHRFAM7A-203ENST00000401522 SWAP70Q9UH65 585 aa18.19■□□□□ 0.5
CHRFAM7A-203ENST00000401522 HERC5Q9UII4 1024 aaKnown RBP18.19■□□□□ 0.5
CHRFAM7A-203ENST00000401522 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.19■□□□□ 0.5
CHRFAM7A-203ENST00000401522 SIPA1L1O43166 1804 aa18.19■□□□□ 0.5
CHRFAM7A-203ENST00000401522 ORC4O43929 436 aa18.18■□□□□ 0.5
CHRFAM7A-203ENST00000401522 CDK8P49336 464 aa18.18■□□□□ 0.5
CHRFAM7A-203ENST00000401522 SART3Q15020 963 aaKnown RBP18.18■□□□□ 0.5
CHRFAM7A-203ENST00000401522 TMC6Q7Z403 805 aa18.18■□□□□ 0.5
CHRFAM7A-203ENST00000401522 SLC26A6Q9BXS9 759 aa18.18■□□□□ 0.5
CHRFAM7A-203ENST00000401522 ZMYND15Q9H091 742 aa18.18■□□□□ 0.5
CHRFAM7A-203ENST00000401522 ZSWIM5Q9P217 1185 aa18.18■□□□□ 0.5
CHRFAM7A-203ENST00000401522 NT5C2P49902 561 aa18.17■□□□□ 0.5
CHRFAM7A-203ENST00000401522 SAFBQ15424 915 aaKnown RBP eCLIP18.17■□□□□ 0.5
CHRFAM7A-203ENST00000401522 NBPF12Q5TAG4 269 aaPredicted RBP18.17■□□□□ 0.5
CHRFAM7A-203ENST00000401522 STK11IPQ8N1F8 1099 aa18.17■□□□□ 0.5
CHRFAM7A-203ENST00000401522 CRACR2BQ8N4Y2 399 aaPredicted RBP18.17■□□□□ 0.5
CHRFAM7A-203ENST00000401522 HOOK2Q96ED9 719 aa18.17■□□□□ 0.5
CHRFAM7A-203ENST00000401522 DNAJC18Q9H819 358 aa18.17■□□□□ 0.5
CHRFAM7A-203ENST00000401522 ADM5C9JUS6 153 aa18.17■□□□□ 0.5
CHRFAM7A-203ENST00000401522 CBFA2T2O43439 604 aa18.17■□□□□ 0.5
CHRFAM7A-203ENST00000401522 SFPQP23246 707 aaKnown RBP eCLIP18.17■□□□□ 0.5
CHRFAM7A-203ENST00000401522 RCAN1P53805 252 aa18.17■□□□□ 0.5
CHRFAM7A-203ENST00000401522 NOSTRINQ8IVI9 506 aa18.17■□□□□ 0.5
CHRFAM7A-203ENST00000401522 ZNF592Q92610 1267 aa18.17■□□□□ 0.5
CHRFAM7A-203ENST00000401522 FANCCQ00597 558 aa18.16■□□□□ 0.5
CHRFAM7A-203ENST00000401522 MYL5Q02045 173 aa18.16■□□□□ 0.5
CHRFAM7A-203ENST00000401522 SUPT20HL1Q3ZLR7 823 aa18.16■□□□□ 0.5
CHRFAM7A-203ENST00000401522 PRAMEF18Q5VWM3 479 aa18.16■□□□□ 0.5
CHRFAM7A-203ENST00000401522 TATDN1Q6P1N9 297 aa18.16■□□□□ 0.5
CHRFAM7A-203ENST00000401522 TRIM22Q8IYM9 498 aa18.16■□□□□ 0.5
CHRFAM7A-203ENST00000401522 TMTC2Q8N394 836 aa18.16■□□□□ 0.5
CHRFAM7A-203ENST00000401522 KRI1Q8N9T8 703 aaKnown RBP18.16■□□□□ 0.5
CHRFAM7A-203ENST00000401522 SLC44A5Q8NCS7 719 aa18.16■□□□□ 0.5
CHRFAM7A-203ENST00000401522 MYL10Q9BUA6 226 aa18.16■□□□□ 0.5
CHRFAM7A-203ENST00000401522 MKNK2Q9HBH9 465 aa18.16■□□□□ 0.5
CHRFAM7A-203ENST00000401522 PRDM1O75626 825 aa18.15■□□□□ 0.5
CHRFAM7A-203ENST00000401522 TUBB4AP04350 444 aa18.15■□□□□ 0.5
CHRFAM7A-203ENST00000401522 SLURP2P0DP57 97 aa18.15■□□□□ 0.5
CHRFAM7A-203ENST00000401522 SHMT1P34896 483 aa18.15■□□□□ 0.5
CHRFAM7A-203ENST00000401522 RTN1Q16799 776 aa18.15■□□□□ 0.5
CHRFAM7A-203ENST00000401522 MAP1SQ66K74 1059 aaPredicted RBP18.15■□□□□ 0.5
CHRFAM7A-203ENST00000401522 ARMCX5Q6P1M9 558 aa18.15■□□□□ 0.5
CHRFAM7A-203ENST00000401522 KRBA2Q6ZNG9 492 aa18.15■□□□□ 0.5
CHRFAM7A-203ENST00000401522 KIF18AQ8NI77 898 aa18.15■□□□□ 0.5
CHRFAM7A-203ENST00000401522 TRIM34Q9BYJ4 488 aa18.15■□□□□ 0.5
CHRFAM7A-203ENST00000401522 GLIS2Q9BZE0 524 aaPredicted RBP18.15■□□□□ 0.5
CHRFAM7A-203ENST00000401522 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.15■□□□□ 0.5
CHRFAM7A-203ENST00000401522 CGNQ9P2M7 1197 aaKnown RBP18.15■□□□□ 0.5
CHRFAM7A-203ENST00000401522 HOOK1Q9UJC3 728 aaKnown RBP18.15■□□□□ 0.5
CHRFAM7A-203ENST00000401522 KCNH3Q9ULD8 1083 aa18.15■□□□□ 0.5
CHRFAM7A-203ENST00000401522 CCDC196A0A1B0GTZ2 297 aa18.15■□□□□ 0.5
CHRFAM7A-203ENST00000401522 MMP1P03956 469 aa18.15■□□□□ 0.5
CHRFAM7A-203ENST00000401522 WTAPQ15007 396 aa18.15■□□□□ 0.5
CHRFAM7A-203ENST00000401522 MIGA2Q7L4E1 593 aa18.15■□□□□ 0.5
CHRFAM7A-203ENST00000401522 ESR2Q92731 530 aa18.15■□□□□ 0.5
CHRFAM7A-203ENST00000401522 TRMT1Q9NXH9 659 aaKnown RBP18.15■□□□□ 0.5
CHRFAM7A-203ENST00000401522 RASA1P20936 1047 aa18.14■□□□□ 0.49
CHRFAM7A-203ENST00000401522 PNOCQ13519 176 aa18.14■□□□□ 0.49
CHRFAM7A-203ENST00000401522 DLK2Q6UY11 383 aa18.14■□□□□ 0.49
CHRFAM7A-203ENST00000401522 ZNF444Q8N0Y2 327 aaPredicted RBP18.14■□□□□ 0.49
CHRFAM7A-203ENST00000401522 FOXP1Q9H334 677 aaPredicted RBP18.14■□□□□ 0.49
CHRFAM7A-203ENST00000401522 TOMM22Q9NS69 142 aa18.14■□□□□ 0.49
CHRFAM7A-203ENST00000401522 ERICH2A1L162 156 aa18.13■□□□□ 0.49
CHRFAM7A-203ENST00000401522 FAM196BA6NMK8 535 aa18.13■□□□□ 0.49
CHRFAM7A-203ENST00000401522 KIF3CO14782 793 aa18.13■□□□□ 0.49
CHRFAM7A-203ENST00000401522 YY1P25490 414 aa18.13■□□□□ 0.49
CHRFAM7A-203ENST00000401522 RRP12Q5JTH9 1297 aaKnown RBP18.13■□□□□ 0.49
CHRFAM7A-203ENST00000401522 DCAF15Q66K64 600 aa18.13■□□□□ 0.49
CHRFAM7A-203ENST00000401522 CNNM3Q8NE01 707 aa18.13■□□□□ 0.49
CHRFAM7A-203ENST00000401522 CDCA5Q96FF9 252 aa18.13■□□□□ 0.49
CHRFAM7A-203ENST00000401522 CLIC6Q96NY7 704 aa18.13■□□□□ 0.49
CHRFAM7A-203ENST00000401522 FEZ1Q99689 392 aa18.13■□□□□ 0.49
CHRFAM7A-203ENST00000401522 HSD3B7Q9H2F3 369 aa18.13■□□□□ 0.49
CHRFAM7A-203ENST00000401522 CCP110O43303 1012 aa18.13■□□□□ 0.49
CHRFAM7A-203ENST00000401522 DEXIO95424 95 aa18.13■□□□□ 0.49
CHRFAM7A-203ENST00000401522 RILPL1Q5EBL4 403 aa18.13■□□□□ 0.49
CHRFAM7A-203ENST00000401522 E4F1Q66K89 784 aaPredicted RBP18.13■□□□□ 0.49
CHRFAM7A-203ENST00000401522 CHADLQ6NUI6 762 aa18.13■□□□□ 0.49
CHRFAM7A-203ENST00000401522 CCDC17Q96LX7 622 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms