RNA–Protein interactions for RNA: ENST00000399959.6

DDX3X-201, Transcript of DEAD-box helicase 3 X-linked, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX3X, Length 5,399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX3X-201ENST00000399959 MCM9Q9NXL9 1143 aa14.97□□□□□ -0.01
DDX3X-201ENST00000399959 PARP1P09874 1014 aaKnown RBP14.97□□□□□ -0.01
DDX3X-201ENST00000399959 ATF2P15336 505 aa14.97□□□□□ -0.01
DDX3X-201ENST00000399959 RCN2Q14257 317 aa14.97□□□□□ -0.01
DDX3X-201ENST00000399959 PLA2G4DQ86XP0 818 aa14.97□□□□□ -0.01
DDX3X-201ENST00000399959 ZNF354CQ86Y25 554 aa14.97□□□□□ -0.01
DDX3X-201ENST00000399959 CNPY4Q8N129 248 aa14.97□□□□□ -0.01
DDX3X-201ENST00000399959 FAM212AQ96EL1 285 aa14.97□□□□□ -0.01
DDX3X-201ENST00000399959 TBC1D7Q9P0N9 293 aa14.97□□□□□ -0.01
DDX3X-201ENST00000399959 FOXO3O43524 673 aa14.97□□□□□ -0.01
DDX3X-201ENST00000399959 CEP70Q8NHQ1 597 aa14.97□□□□□ -0.01
DDX3X-201ENST00000399959 FAM167BQ9BTA0 163 aa14.97□□□□□ -0.01
DDX3X-201ENST00000399959 EIF3BP55884 814 aaKnown RBP14.97□□□□□ -0.01
DDX3X-201ENST00000399959 NAA35Q5VZE5 725 aa14.97□□□□□ -0.01
DDX3X-201ENST00000399959 LSG1Q9H089 658 aaKnown RBP14.97□□□□□ -0.01
DDX3X-201ENST00000399959 TADA3O75528 432 aa14.96□□□□□ -0.01
DDX3X-201ENST00000399959 H2AFZP0C0S5 128 aa14.96□□□□□ -0.01
DDX3X-201ENST00000399959 VPS41P49754 854 aa14.96□□□□□ -0.01
DDX3X-201ENST00000399959 H2AFVQ71UI9 128 aa14.96□□□□□ -0.01
DDX3X-201ENST00000399959 RPGRQ92834 1020 aaKnown RBP14.96□□□□□ -0.01
DDX3X-201ENST00000399959 PDHA1P08559 390 aa14.96□□□□□ -0.01
DDX3X-201ENST00000399959 MRPS9P82933 396 aaKnown RBP14.96□□□□□ -0.01
DDX3X-201ENST00000399959 BIRC3Q13489 604 aa14.96□□□□□ -0.01
DDX3X-201ENST00000399959 IQGAP2Q13576 1575 aa14.96□□□□□ -0.01
DDX3X-201ENST00000399959 ANKRD35Q8N283 1001 aa14.96□□□□□ -0.01
DDX3X-201ENST00000399959 NESP48681 1621 aa14.96□□□□□ -0.01
DDX3X-201ENST00000399959 MAP3K5Q99683 1374 aa14.96□□□□□ -0.01
DDX3X-201ENST00000399959 PPIP5K1Q6PFW1 1433 aa14.96□□□□□ -0.01
DDX3X-201ENST00000399959 TIMM10P62072 90 aa14.96□□□□□ -0.01
DDX3X-201ENST00000399959 SLC7A5Q01650 507 aa14.96□□□□□ -0.01
DDX3X-201ENST00000399959 DAAM1Q9Y4D1 1078 aa14.96□□□□□ -0.01
DDX3X-201ENST00000399959 TRPA1O75762 1119 aa14.96□□□□□ -0.02
DDX3X-201ENST00000399959 POLR2FP61218 127 aaKnown RBP14.96□□□□□ -0.02
DDX3X-201ENST00000399959 RPN1P04843 607 aaKnown RBP14.95□□□□□ -0.02
DDX3X-201ENST00000399959 STRN3Q13033 797 aa14.95□□□□□ -0.02
DDX3X-201ENST00000399959 CAPN12Q6ZSI9 719 aa14.95□□□□□ -0.02
DDX3X-201ENST00000399959 TMTC3Q6ZXV5 915 aa14.95□□□□□ -0.02
DDX3X-201ENST00000399959 ELAC2Q9BQ52 826 aaKnown RBP14.95□□□□□ -0.02
DDX3X-201ENST00000399959 USP19O94966 1318 aa14.95□□□□□ -0.02
DDX3X-201ENST00000399959 RASSF10A6NK89 507 aa14.95□□□□□ -0.02
DDX3X-201ENST00000399959 USP27XA6NNY8 438 aa14.95□□□□□ -0.02
DDX3X-201ENST00000399959 PPP6R2O75170 966 aa14.95□□□□□ -0.02
DDX3X-201ENST00000399959 CXCR5P32302 372 aa14.95□□□□□ -0.02
DDX3X-201ENST00000399959 SCRN1Q12765 414 aa14.95□□□□□ -0.02
DDX3X-201ENST00000399959 NONOQ15233 471 aaKnown RBP eCLIP14.95□□□□□ -0.022e-6■■□□□ 13.6
DDX3X-201ENST00000399959 APOEP02649 317 aa14.95□□□□□ -0.02
DDX3X-201ENST00000399959 SLC39A14Q15043 492 aa14.95□□□□□ -0.02
DDX3X-201ENST00000399959 ARHGAP44Q17R89 818 aa14.95□□□□□ -0.02
DDX3X-201ENST00000399959 KRT25Q7Z3Z0 450 aa14.95□□□□□ -0.02
DDX3X-201ENST00000399959 RETREG2Q8NC44 543 aa14.95□□□□□ -0.02
DDX3X-201ENST00000399959 FNBP1Q96RU3 617 aa14.95□□□□□ -0.02
DDX3X-201ENST00000399959 POLR3EQ9NVU0 708 aa14.95□□□□□ -0.02
DDX3X-201ENST00000399959 VPS54Q9P1Q0 977 aa14.95□□□□□ -0.02
DDX3X-201ENST00000399959 RCOR1Q9UKL0 485 aa14.95□□□□□ -0.02
DDX3X-201ENST00000399959 PGRMC1O00264 195 aaKnown RBP14.95□□□□□ -0.02
DDX3X-201ENST00000399959 SLC39A6Q13433 755 aa14.95□□□□□ -0.02
DDX3X-201ENST00000399959 GEMIN8Q9NWZ8 242 aaKnown RBP14.95□□□□□ -0.02
DDX3X-201ENST00000399959 A0A0D9SFI3 127 aa14.94□□□□□ -0.02
DDX3X-201ENST00000399959 CHGBP05060 677 aa14.94□□□□□ -0.02
DDX3X-201ENST00000399959 SATB1Q01826 763 aa14.94□□□□□ -0.02
DDX3X-201ENST00000399959 PDZD8Q8NEN9 1154 aa14.94□□□□□ -0.02
DDX3X-201ENST00000399959 GSDMAQ96QA5 445 aa14.94□□□□□ -0.02
DDX3X-201ENST00000399959 PLAAQ9Y263 795 aa14.94□□□□□ -0.02
DDX3X-201ENST00000399959 UGGT2Q9NYU1 1516 aa14.94□□□□□ -0.02
DDX3X-201ENST00000399959 B4DLN1 442 aa14.94□□□□□ -0.02
DDX3X-201ENST00000399959 NDUFA10O95299 355 aa14.94□□□□□ -0.02
DDX3X-201ENST00000399959 PLTPP55058 493 aa14.94□□□□□ -0.02
DDX3X-201ENST00000399959 ARHGAP4P98171 946 aa14.94□□□□□ -0.02
DDX3X-201ENST00000399959 ZNF449Q6P9G9 518 aa14.94□□□□□ -0.02
DDX3X-201ENST00000399959 TRMT2AQ8IZ69 625 aaKnown RBP14.94□□□□□ -0.02
DDX3X-201ENST00000399959 DRC3Q9H069 523 aa14.94□□□□□ -0.02
DDX3X-201ENST00000399959 PHF8Q9UPP1 1060 aa14.94□□□□□ -0.02
DDX3X-201ENST00000399959 IFT140Q96RY7 1462 aa14.94□□□□□ -0.02
DDX3X-201ENST00000399959 STK10O94804 968 aaKnown RBP14.94□□□□□ -0.02
DDX3X-201ENST00000399959 MSH2P43246 934 aa14.94□□□□□ -0.02
DDX3X-201ENST00000399959 CASC4Q6P4E1 433 aa14.94□□□□□ -0.02
DDX3X-201ENST00000399959 DCUN1D2Q6PH85 259 aa14.94□□□□□ -0.02
DDX3X-201ENST00000399959 NLRP14Q86W24 1093 aa14.94□□□□□ -0.02
DDX3X-201ENST00000399959 DTNBP1Q96EV8 351 aa14.94□□□□□ -0.02
DDX3X-201ENST00000399959 BATF3Q9NR55 127 aa14.94□□□□□ -0.02
DDX3X-201ENST00000399959 NFU1Q9UMS0 254 aa14.94□□□□□ -0.02
DDX3X-201ENST00000399959 ARHGAP18Q8N392 663 aa14.94□□□□□ -0.02
DDX3X-201ENST00000399959 PIP4K2CQ8TBX8 421 aa14.94□□□□□ -0.02
DDX3X-201ENST00000399959 NEK9Q8TD19 979 aa14.94□□□□□ -0.02
DDX3X-201ENST00000399959 FGD4Q96M96 766 aa14.94□□□□□ -0.02
DDX3X-201ENST00000399959 TUBGCP2Q9BSJ2 902 aa14.94□□□□□ -0.02
DDX3X-201ENST00000399959 UHRF1BP1Q6BDS2 1440 aa14.94□□□□□ -0.02
DDX3X-201ENST00000399959 TRIM37O94972 964 aa14.93□□□□□ -0.02
DDX3X-201ENST00000399959 MOCS3O95396 460 aa14.93□□□□□ -0.02
DDX3X-201ENST00000399959 MRPL12P52815 198 aaKnown RBP14.93□□□□□ -0.02
DDX3X-201ENST00000399959 FBXW10Q5XX13 1052 aa14.93□□□□□ -0.02
DDX3X-201ENST00000399959 ENOX1Q8TC92 643 aaKnown RBP14.93□□□□□ -0.02
DDX3X-201ENST00000399959 OSBPL1AQ9BXW6 950 aa14.93□□□□□ -0.02
DDX3X-201ENST00000399959 MRPL46Q9H2W6 279 aaKnown RBP14.93□□□□□ -0.02
DDX3X-201ENST00000399959 TOPBP1Q92547 1522 aa14.93□□□□□ -0.02
DDX3X-201ENST00000399959 CHL1O00533 1208 aa14.93□□□□□ -0.02
DDX3X-201ENST00000399959 IFNB1P01574 187 aa14.93□□□□□ -0.02
DDX3X-201ENST00000399959 XRCC5P13010 732 aaKnown RBP14.93□□□□□ -0.02
DDX3X-201ENST00000399959 EEF1GP26641 437 aaKnown RBP14.93□□□□□ -0.02
DDX3X-201ENST00000399959 ADCK5Q3MIX3 580 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms