RNA–Protein interactions for RNA: ENST00000399448.5

PTPN6-202, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN6, Length 2,159 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-202ENST00000399448 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.49■□□□□ 0.07
PTPN6-202ENST00000399448 BBOX1O75936 387 aa15.49■□□□□ 0.07
PTPN6-202ENST00000399448 CDK8P49336 464 aa15.49■□□□□ 0.07
PTPN6-202ENST00000399448 ST5P78524 1137 aa15.49■□□□□ 0.07
PTPN6-202ENST00000399448 C16orf86Q6ZW13 317 aa15.49■□□□□ 0.07
PTPN6-202ENST00000399448 SLF2Q8IX21 1173 aa15.49■□□□□ 0.07
PTPN6-202ENST00000399448 TEX11Q8IYF3 940 aa15.49■□□□□ 0.07
PTPN6-202ENST00000399448 IGSF22Q8N9C0 903 aa15.49■□□□□ 0.07
PTPN6-202ENST00000399448 NEDD1Q8NHV4 660 aa15.49■□□□□ 0.07
PTPN6-202ENST00000399448 GJD4Q96KN9 370 aaPredicted RBP15.49■□□□□ 0.07
PTPN6-202ENST00000399448 EYA3Q99504 573 aa15.49■□□□□ 0.07
PTPN6-202ENST00000399448 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.49■□□□□ 0.07
PTPN6-202ENST00000399448 V9GYY5 206 aaPredicted RBP15.49■□□□□ 0.07
PTPN6-202ENST00000399448 LRRC10BA6NIK2 292 aa15.49■□□□□ 0.07
PTPN6-202ENST00000399448 KLRF2D3W0D1 207 aa15.49■□□□□ 0.07
PTPN6-202ENST00000399448 LAD1O00515 517 aa15.49■□□□□ 0.07
PTPN6-202ENST00000399448 RPN1P04843 607 aaKnown RBP15.49■□□□□ 0.07
PTPN6-202ENST00000399448 STAT6P42226 847 aa15.49■□□□□ 0.07
PTPN6-202ENST00000399448 CBX1P83916 185 aa15.49■□□□□ 0.07
PTPN6-202ENST00000399448 ELF2Q15723 593 aa15.49■□□□□ 0.07
PTPN6-202ENST00000399448 SMAP1Q8IYB5 467 aaPredicted RBP15.49■□□□□ 0.07
PTPN6-202ENST00000399448 SPZ1Q9BXG8 430 aa15.49■□□□□ 0.07
PTPN6-202ENST00000399448 NAA15Q9BXJ9 866 aaKnown RBP15.49■□□□□ 0.07
PTPN6-202ENST00000399448 SRRTQ9BXP5 876 aaKnown RBP15.49■□□□□ 0.07
PTPN6-202ENST00000399448 LRRC4BQ9NT99 713 aa15.49■□□□□ 0.07
PTPN6-202ENST00000399448 LIMA1Q9UHB6 759 aaKnown RBP15.49■□□□□ 0.07
PTPN6-202ENST00000399448 SERPINB2P05120 415 aa15.48■□□□□ 0.07
PTPN6-202ENST00000399448 SPAG1Q07617 926 aa15.48■□□□□ 0.07
PTPN6-202ENST00000399448 DISC1Q9NRI5 854 aa15.48■□□□□ 0.07
PTPN6-202ENST00000399448 OGFRQ9NZT2 677 aa15.48■□□□□ 0.07
PTPN6-202ENST00000399448 GYS1P13807 737 aa15.48■□□□□ 0.07
PTPN6-202ENST00000399448 SMARCA1P28370 1054 aa15.48■□□□□ 0.07
PTPN6-202ENST00000399448 RBL2Q08999 1139 aa15.48■□□□□ 0.07
PTPN6-202ENST00000399448 PAK1Q13153 545 aa15.48■□□□□ 0.07
PTPN6-202ENST00000399448 INF2Q27J81 1249 aa15.48■□□□□ 0.07
PTPN6-202ENST00000399448 TOGARAM2Q6ZUX3 1019 aa15.48■□□□□ 0.07
PTPN6-202ENST00000399448 TBC1D22AQ8WUA7 517 aa15.48■□□□□ 0.07
PTPN6-202ENST00000399448 CCSER1Q9C0I3 900 aa15.48■□□□□ 0.07
PTPN6-202ENST00000399448 ZMYND12Q9H0C1 365 aa15.48■□□□□ 0.07
PTPN6-202ENST00000399448 PODXL2Q9NZ53 605 aa15.48■□□□□ 0.07
PTPN6-202ENST00000399448 MTMR7Q9Y216 660 aa15.48■□□□□ 0.07
PTPN6-202ENST00000399448 ITIH6Q6UXX5 1313 aa15.47■□□□□ 0.07
PTPN6-202ENST00000399448 SPDYE4A6NLX3 237 aa15.47■□□□□ 0.07
PTPN6-202ENST00000399448 PARP1P09874 1014 aaKnown RBP15.47■□□□□ 0.07
PTPN6-202ENST00000399448 CDC25AP30304 524 aa15.47■□□□□ 0.07
PTPN6-202ENST00000399448 PRPHP41219 470 aa15.47■□□□□ 0.07
PTPN6-202ENST00000399448 SEMA3FQ13275 785 aa15.47■□□□□ 0.07
PTPN6-202ENST00000399448 KARSQ15046 597 aaKnown RBP15.47■□□□□ 0.07
PTPN6-202ENST00000399448 CCDC12Q8WUD4 166 aaPredicted RBP15.47■□□□□ 0.07
PTPN6-202ENST00000399448 NELFBQ8WX92 580 aa15.47■□□□□ 0.07
PTPN6-202ENST00000399448 TMEM60Q9H2L4 133 aa15.47■□□□□ 0.07
PTPN6-202ENST00000399448 FLT1P17948 1338 aa15.47■□□□□ 0.07
PTPN6-202ENST00000399448 URI1O94763 535 aaPredicted RBP15.46■□□□□ 0.07
PTPN6-202ENST00000399448 MYL1P05976 194 aa15.46■□□□□ 0.07
PTPN6-202ENST00000399448 GOLGA8HP0CJ92 632 aa15.46■□□□□ 0.07
PTPN6-202ENST00000399448 HOXA10P31260 410 aaPredicted RBP15.46■□□□□ 0.07
PTPN6-202ENST00000399448 UBA7P41226 1012 aa15.46■□□□□ 0.07
PTPN6-202ENST00000399448 RHBDL3P58872 404 aa15.46■□□□□ 0.07
PTPN6-202ENST00000399448 KMT5BQ4FZB7 885 aa15.46■□□□□ 0.07
PTPN6-202ENST00000399448 MFSD14BQ5SR56 506 aa15.46■□□□□ 0.07
PTPN6-202ENST00000399448 ANKRD20A12PQ8NF67 263 aa15.46■□□□□ 0.07
PTPN6-202ENST00000399448 CCDC51Q96ER9 411 aa15.46■□□□□ 0.07
PTPN6-202ENST00000399448 DDX41Q9UJV9 622 aaKnown RBP15.46■□□□□ 0.07
PTPN6-202ENST00000399448 ONECUT3O60422 494 aaPredicted RBP15.46■□□□□ 0.07
PTPN6-202ENST00000399448 CASQ1P31415 396 aa15.46■□□□□ 0.07
PTPN6-202ENST00000399448 GNG11P61952 73 aa15.46■□□□□ 0.07
PTPN6-202ENST00000399448 KRT31Q15323 416 aa15.46■□□□□ 0.07
PTPN6-202ENST00000399448 KRT25Q7Z3Z0 450 aa15.46■□□□□ 0.07
PTPN6-202ENST00000399448 TBC1D16Q8TBP0 767 aa15.46■□□□□ 0.07
PTPN6-202ENST00000399448 SNED1Q8TER0 1413 aa15.46■□□□□ 0.06
PTPN6-202ENST00000399448 GAKO14976 1311 aa15.46■□□□□ 0.06
PTPN6-202ENST00000399448 FANCGO15287 622 aa15.45■□□□□ 0.06
PTPN6-202ENST00000399448 MFAP3LO75121 409 aa15.45■□□□□ 0.06
PTPN6-202ENST00000399448 TPM1P09493 284 aa15.45■□□□□ 0.06
PTPN6-202ENST00000399448 CCDC175P0C221 793 aa15.45■□□□□ 0.06
PTPN6-202ENST00000399448 GNA11P29992 359 aa15.45■□□□□ 0.06
PTPN6-202ENST00000399448 NOVP48745 357 aa15.45■□□□□ 0.06
PTPN6-202ENST00000399448 NAPAP54920 295 aa15.45■□□□□ 0.06
PTPN6-202ENST00000399448 KCNB1Q14721 858 aa15.45■□□□□ 0.06
PTPN6-202ENST00000399448 ERCC6LQ2NKX8 1250 aa15.45■□□□□ 0.06
PTPN6-202ENST00000399448 NAALADL2Q58DX5 795 aa15.45■□□□□ 0.06
PTPN6-202ENST00000399448 CNGA4Q8IV77 575 aa15.45■□□□□ 0.06
PTPN6-202ENST00000399448 RRP36Q96EU6 259 aaKnown RBP15.45■□□□□ 0.06
PTPN6-202ENST00000399448 CRAMP1Q96RY5 1269 aa15.45■□□□□ 0.06
PTPN6-202ENST00000399448 C6orf50Q9HD87 102 aa15.45■□□□□ 0.06
PTPN6-202ENST00000399448 PARP3Q9Y6F1 533 aa15.45■□□□□ 0.06
PTPN6-202ENST00000399448 H7C1D1 291 aa15.45■□□□□ 0.06
PTPN6-202ENST00000399448 N4BP3O15049 544 aa15.45■□□□□ 0.06
PTPN6-202ENST00000399448 PRCPP42785 496 aa15.45■□□□□ 0.06
PTPN6-202ENST00000399448 COPB1P53618 953 aaKnown RBP15.45■□□□□ 0.06
PTPN6-202ENST00000399448 TCP11X2Q5H9J9 407 aa15.45■□□□□ 0.06
PTPN6-202ENST00000399448 FBXO38Q6PIJ6 1188 aa15.45■□□□□ 0.06
PTPN6-202ENST00000399448 RASSF8Q8NHQ8 419 aa15.45■□□□□ 0.06
PTPN6-202ENST00000399448 CPLX3Q8WVH0 158 aa15.45■□□□□ 0.06
PTPN6-202ENST00000399448 AK8Q96MA6 479 aa15.45■□□□□ 0.06
PTPN6-202ENST00000399448 POLLQ9UGP5 575 aa15.45■□□□□ 0.06
PTPN6-202ENST00000399448 GDAQ9Y2T3 454 aa15.45■□□□□ 0.06
PTPN6-202ENST00000399448 SMCO2A6NFE2 343 aa15.44■□□□□ 0.06
PTPN6-202ENST00000399448 KCNJ18B7U540 433 aa15.44■□□□□ 0.06
PTPN6-202ENST00000399448 COBLO75128 1261 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms