RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 SLC38A10Q9HBR0 1119 aa17.59■□□□□ 0.41
SMIM11A-203ENST00000399299 TCP11L1Q9NUJ3 509 aa17.59■□□□□ 0.41
SMIM11A-203ENST00000399299 NMT2O60551 498 aa17.58■□□□□ 0.4
SMIM11A-203ENST00000399299 MSCO60682 206 aa17.58■□□□□ 0.4
SMIM11A-203ENST00000399299 ZBED4O75132 1171 aa17.58■□□□□ 0.4
SMIM11A-203ENST00000399299 CYBAP13498 195 aa17.58■□□□□ 0.4
SMIM11A-203ENST00000399299 GSPT1P15170 499 aaKnown RBP17.58■□□□□ 0.4
SMIM11A-203ENST00000399299 NT5C2P49902 561 aa17.58■□□□□ 0.4
SMIM11A-203ENST00000399299 MNX1P50219 401 aaPredicted RBP17.58■□□□□ 0.4
SMIM11A-203ENST00000399299 STAT2P52630 851 aa17.58■□□□□ 0.4
SMIM11A-203ENST00000399299 OAZ1P54368 228 aa17.58■□□□□ 0.4
SMIM11A-203ENST00000399299 AKNAD1Q5T1N1 836 aa17.58■□□□□ 0.4
SMIM11A-203ENST00000399299 LHX8Q68G74 356 aa17.58■□□□□ 0.4
SMIM11A-203ENST00000399299 SNRNP48Q6IEG0 339 aaKnown RBP17.58■□□□□ 0.4
SMIM11A-203ENST00000399299 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.58■□□□□ 0.4
SMIM11A-203ENST00000399299 FAM160B2Q86V87 743 aa17.58■□□□□ 0.4
SMIM11A-203ENST00000399299 STAG1Q8WVM7 1258 aa17.58■□□□□ 0.4
SMIM11A-203ENST00000399299 PAWRQ96IZ0 340 aaKnown RBP17.58■□□□□ 0.4
SMIM11A-203ENST00000399299 MMP19Q99542 508 aa17.58■□□□□ 0.4
SMIM11A-203ENST00000399299 DSCC1Q9BVC3 393 aa17.58■□□□□ 0.4
SMIM11A-203ENST00000399299 NBPF3Q9H094 633 aa17.58■□□□□ 0.4
SMIM11A-203ENST00000399299 RNF41Q9H4P4 317 aaPredicted RBP17.58■□□□□ 0.4
SMIM11A-203ENST00000399299 TOMM22Q9NS69 142 aa17.58■□□□□ 0.4
SMIM11A-203ENST00000399299 DIS3Q9Y2L1 958 aaKnown RBP17.58■□□□□ 0.4
SMIM11A-203ENST00000399299 ALPK3Q96L96 1907 aa17.58■□□□□ 0.4
SMIM11A-203ENST00000399299 CYP2C19P33261 490 aa17.57■□□□□ 0.4
SMIM11A-203ENST00000399299 SLC1A4P43007 532 aa17.57■□□□□ 0.4
SMIM11A-203ENST00000399299 HAND2P61296 217 aa17.57■□□□□ 0.4
SMIM11A-203ENST00000399299 KCTD2Q14681 263 aa17.57■□□□□ 0.4
SMIM11A-203ENST00000399299 RRP12Q5JTH9 1297 aaKnown RBP17.57■□□□□ 0.4
SMIM11A-203ENST00000399299 MFSD6Q6ZSS7 791 aa17.57■□□□□ 0.4
SMIM11A-203ENST00000399299 CHURC1Q8WUH1 139 aa17.57■□□□□ 0.4
SMIM11A-203ENST00000399299 DPF3Q92784 378 aa17.57■□□□□ 0.4
SMIM11A-203ENST00000399299 KIFC2Q96AC6 838 aa17.57■□□□□ 0.4
SMIM11A-203ENST00000399299 MAML3Q96JK9 1138 aa17.57■□□□□ 0.4
SMIM11A-203ENST00000399299 CTDP1Q9Y5B0 961 aaPredicted RBP17.57■□□□□ 0.4
SMIM11A-203ENST00000399299 TMEM232C9JQI7 657 aa17.56■□□□□ 0.4
SMIM11A-203ENST00000399299 RCSD1Q6JBY9 416 aa17.56■□□□□ 0.4
SMIM11A-203ENST00000399299 TBC1D10CQ8IV04 446 aa17.56■□□□□ 0.4
SMIM11A-203ENST00000399299 DIS3LQ8TF46 1054 aaKnown RBP17.56■□□□□ 0.4
SMIM11A-203ENST00000399299 DDX20Q9UHI6 824 aaKnown RBP17.56■□□□□ 0.4
SMIM11A-203ENST00000399299 RAD50Q92878 1312 aa17.55■□□□□ 0.4
SMIM11A-203ENST00000399299 ZNF213O14771 459 aa17.55■□□□□ 0.4
SMIM11A-203ENST00000399299 TOP1P11387 765 aaKnown RBP17.55■□□□□ 0.4
SMIM11A-203ENST00000399299 MCCP23508 829 aa17.55■□□□□ 0.4
SMIM11A-203ENST00000399299 ZNF792Q3KQV3 632 aa17.55■□□□□ 0.4
SMIM11A-203ENST00000399299 TRPV1Q8NER1 839 aa17.55■□□□□ 0.4
SMIM11A-203ENST00000399299 DCAF4Q8WV16 495 aa17.55■□□□□ 0.4
SMIM11A-203ENST00000399299 NRBP1Q9UHY1 535 aa17.55■□□□□ 0.4
SMIM11A-203ENST00000399299 RIPK3Q9Y572 518 aa17.55■□□□□ 0.4
SMIM11A-203ENST00000399299 NR2E3Q9Y5X4 410 aa17.55■□□□□ 0.4
SMIM11A-203ENST00000399299 H0YGN5 161 aa17.54■□□□□ 0.4
SMIM11A-203ENST00000399299 CPXCR1Q8N123 301 aa17.54■□□□□ 0.4
SMIM11A-203ENST00000399299 CHST13Q8NET6 341 aa17.54■□□□□ 0.4
SMIM11A-203ENST00000399299 ESR2Q92731 530 aa17.54■□□□□ 0.4
SMIM11A-203ENST00000399299 TTC14Q96N46 770 aa17.54■□□□□ 0.4
SMIM11A-203ENST00000399299 C11orf49Q9H6J7 331 aa17.54■□□□□ 0.4
SMIM11A-203ENST00000399299 RAVER2Q9HCJ3 691 aaKnown RBP17.54■□□□□ 0.4
SMIM11A-203ENST00000399299 FBXO40Q9UH90 709 aa17.54■□□□□ 0.4
SMIM11A-203ENST00000399299 ISY1Q9ULR0 285 aaKnown RBP17.54■□□□□ 0.4
SMIM11A-203ENST00000399299 NEDD4P46934 1319 aa17.53■□□□□ 0.4
SMIM11A-203ENST00000399299 DNAJC25-GNG10A0A024R161 153 aa17.53■□□□□ 0.4
SMIM11A-203ENST00000399299 SEPT4O43236 478 aa17.53■□□□□ 0.4
SMIM11A-203ENST00000399299 PGK2P07205 417 aa17.53■□□□□ 0.4
SMIM11A-203ENST00000399299 COL6A1P12109 1028 aa17.53■□□□□ 0.4
SMIM11A-203ENST00000399299 CNGA1P29973 690 aa17.53■□□□□ 0.4
SMIM11A-203ENST00000399299 IKQ13123 557 aaPredicted RBP17.53■□□□□ 0.4
SMIM11A-203ENST00000399299 IMMTQ16891 758 aaKnown RBP17.53■□□□□ 0.4
SMIM11A-203ENST00000399299 KCTD1Q719H9 257 aa17.53■□□□□ 0.4
SMIM11A-203ENST00000399299 MSL3Q8N5Y2 521 aaKnown RBP17.53■□□□□ 0.4
SMIM11A-203ENST00000399299 TMEM47Q9BQJ4 181 aa17.53■□□□□ 0.4
SMIM11A-203ENST00000399299 TINF2Q9BSI4 451 aa17.53■□□□□ 0.4
SMIM11A-203ENST00000399299 CTNNA3Q9UI47 895 aa17.53■□□□□ 0.4
SMIM11A-203ENST00000399299 EVI5O60447 810 aa17.52■□□□□ 0.4
SMIM11A-203ENST00000399299 BTNL9Q6UXG8 535 aa17.52■□□□□ 0.4
SMIM11A-203ENST00000399299 RUFY2Q8WXA3 655 aa17.52■□□□□ 0.4
SMIM11A-203ENST00000399299 IL25Q9H293 177 aa17.52■□□□□ 0.4
SMIM11A-203ENST00000399299 PFASO15067 1338 aa17.51■□□□□ 0.39
SMIM11A-203ENST00000399299 ZNF536O15090 1300 aa17.51■□□□□ 0.39
SMIM11A-203ENST00000399299 CCDC96Q2M329 555 aa17.51■□□□□ 0.39
SMIM11A-203ENST00000399299 TKFCQ3LXA3 575 aa17.51■□□□□ 0.39
SMIM11A-203ENST00000399299 CCDC178Q5BJE1 867 aa17.51■□□□□ 0.39
SMIM11A-203ENST00000399299 RASGRP2Q7LDG7 609 aa17.51■□□□□ 0.39
SMIM11A-203ENST00000399299 ZNF467Q7Z7K2 595 aaPredicted RBP17.51■□□□□ 0.39
SMIM11A-203ENST00000399299 DDX11Q96FC9 970 aa17.51■□□□□ 0.39
SMIM11A-203ENST00000399299 PRR12Q9ULL5 1215 aa17.51■□□□□ 0.39
SMIM11A-203ENST00000399299 SYNGAP1Q96PV0 1343 aa17.5■□□□□ 0.39
SMIM11A-203ENST00000399299 PDHBP11177 359 aa17.5■□□□□ 0.39
SMIM11A-203ENST00000399299 CHMLP26374 656 aa17.5■□□□□ 0.39
SMIM11A-203ENST00000399299 MAMDC4Q6UXC1 1216 aa17.5■□□□□ 0.39
SMIM11A-203ENST00000399299 IQCA1Q86XH1 822 aa17.5■□□□□ 0.39
SMIM11A-203ENST00000399299 DGKHQ86XP1 1220 aa17.5■□□□□ 0.39
SMIM11A-203ENST00000399299 ACAD9Q9H845 621 aa17.5■□□□□ 0.39
SMIM11A-203ENST00000399299 CNNM2Q9H8M5 875 aa17.5■□□□□ 0.39
SMIM11A-203ENST00000399299 DNAH12Q6ZR08 3092 aa17.5■□□□□ 0.39
SMIM11A-203ENST00000399299 SMCHD1A6NHR9 2005 aa17.5■□□□□ 0.39
SMIM11A-203ENST00000399299 RANBP2P49792 3224 aaKnown RBP17.49■□□□□ 0.39
SMIM11A-203ENST00000399299 DNM1LO00429 736 aa17.49■□□□□ 0.39
SMIM11A-203ENST00000399299 KDM4AO75164 1064 aa17.49■□□□□ 0.39
SMIM11A-203ENST00000399299 SNHG28P0DPA3 235 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms