RNA–Protein interactions for RNA: ENST00000399126.1

COL25A1-201, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-201ENST00000399126 KINO60870 393 aaKnown RBP17.34■□□□□ 0.37
COL25A1-201ENST00000399126 JDP2Q8WYK2 163 aa17.34■□□□□ 0.37
COL25A1-201ENST00000399126 VPS33BQ9H267 617 aa17.34■□□□□ 0.37
COL25A1-201ENST00000399126 SNHG28P0DPA3 235 aa17.34■□□□□ 0.37
COL25A1-201ENST00000399126 EEF2P13639 858 aaKnown RBP17.34■□□□□ 0.37
COL25A1-201ENST00000399126 CMA1P23946 247 aa17.34■□□□□ 0.37
COL25A1-201ENST00000399126 CIAPIN1Q6FI81 312 aa17.34■□□□□ 0.37
COL25A1-201ENST00000399126 SIAH1Q8IUQ4 282 aa17.34■□□□□ 0.37
COL25A1-201ENST00000399126 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.34■□□□□ 0.37
COL25A1-201ENST00000399126 SPDYE2Q495Y8 402 aa17.33■□□□□ 0.36
COL25A1-201ENST00000399126 KCTD1Q719H9 257 aa17.33■□□□□ 0.36
COL25A1-201ENST00000399126 AGBL3Q8NEM8 1001 aa17.33■□□□□ 0.36
COL25A1-201ENST00000399126 TMEM39BQ9GZU3 492 aa17.33■□□□□ 0.36
COL25A1-201ENST00000399126 BRMS1Q9HCU9 246 aa17.33■□□□□ 0.36
COL25A1-201ENST00000399126 BARHL2Q9NY43 387 aa17.33■□□□□ 0.36
COL25A1-201ENST00000399126 FBXO2Q9UK22 296 aaPredicted RBP17.33■□□□□ 0.36
COL25A1-201ENST00000399126 CCDC192P0DO97 292 aa17.33■□□□□ 0.36
COL25A1-201ENST00000399126 SLC16A2P36021 539 aa17.33■□□□□ 0.36
COL25A1-201ENST00000399126 ZNF174Q15697 407 aa17.33■□□□□ 0.36
COL25A1-201ENST00000399126 FOXP4Q8IVH2 680 aaPredicted RBP17.33■□□□□ 0.36
COL25A1-201ENST00000399126 CCDC17Q96LX7 622 aa17.33■□□□□ 0.36
COL25A1-201ENST00000399126 TMOD2Q9NZR1 351 aa17.33■□□□□ 0.36
COL25A1-201ENST00000399126 SETQ01105 290 aaPredicted RBP17.32■□□□□ 0.36
COL25A1-201ENST00000399126 METTL16Q86W50 562 aaKnown RBP17.32■□□□□ 0.36
COL25A1-201ENST00000399126 LZTS2Q9BRK4 669 aa17.32■□□□□ 0.36
COL25A1-201ENST00000399126 WNT10BO00744 389 aa17.32■□□□□ 0.36
COL25A1-201ENST00000399126 ZNF202O95125 648 aa17.32■□□□□ 0.36
COL25A1-201ENST00000399126 ZNF543Q08ER8 600 aa17.32■□□□□ 0.36
COL25A1-201ENST00000399126 RBM26Q5T8P6 1007 aaKnown RBP17.32■□□□□ 0.36
COL25A1-201ENST00000399126 BLIDQ8IZY5 108 aa17.32■□□□□ 0.36
COL25A1-201ENST00000399126 JMYQ8N9B5 988 aa17.32■□□□□ 0.36
COL25A1-201ENST00000399126 KRI1Q8N9T8 703 aaKnown RBP17.32■□□□□ 0.36
COL25A1-201ENST00000399126 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.32■□□□□ 0.36
COL25A1-201ENST00000399126 PCDHA4Q9UN74 947 aa17.32■□□□□ 0.36
COL25A1-201ENST00000399126 TRIM75PA6NK02 468 aa17.31■□□□□ 0.36
COL25A1-201ENST00000399126 GH2P01242 217 aa17.31■□□□□ 0.36
COL25A1-201ENST00000399126 PPP4R3BQ5MIZ7 849 aa17.31■□□□□ 0.36
COL25A1-201ENST00000399126 USP49Q70CQ1 688 aa17.31■□□□□ 0.36
COL25A1-201ENST00000399126 PLCD3Q8N3E9 789 aa17.31■□□□□ 0.36
COL25A1-201ENST00000399126 ZNF830Q96NB3 372 aaPredicted RBP17.31■□□□□ 0.36
COL25A1-201ENST00000399126 M0R2N6 131 aa17.31■□□□□ 0.36
COL25A1-201ENST00000399126 CCDC96Q2M329 555 aa17.31■□□□□ 0.36
COL25A1-201ENST00000399126 ABCB5Q2M3G0 1257 aa17.31■□□□□ 0.36
COL25A1-201ENST00000399126 ANO6Q4KMQ2 910 aa17.31■□□□□ 0.36
COL25A1-201ENST00000399126 RESP18Q5W5W9 173 aa17.31■□□□□ 0.36
COL25A1-201ENST00000399126 MTERF4Q7Z6M4 381 aaKnown RBP17.31■□□□□ 0.36
COL25A1-201ENST00000399126 RRP36Q96EU6 259 aaKnown RBP17.31■□□□□ 0.36
COL25A1-201ENST00000399126 RIOX1Q9H6W3 641 aa17.31■□□□□ 0.36
COL25A1-201ENST00000399126 SH3GLB2Q9NR46 395 aa17.31■□□□□ 0.36
COL25A1-201ENST00000399126 HPSEQ9Y251 543 aa17.31■□□□□ 0.36
COL25A1-201ENST00000399126 CUTAO60888 179 aa17.3■□□□□ 0.36
COL25A1-201ENST00000399126 PTPREP23469 700 aa17.3■□□□□ 0.36
COL25A1-201ENST00000399126 NAPAP54920 295 aa17.3■□□□□ 0.36
COL25A1-201ENST00000399126 ICA1Q05084 483 aa17.3■□□□□ 0.36
COL25A1-201ENST00000399126 ASPRV1Q53RT3 343 aa17.3■□□□□ 0.36
COL25A1-201ENST00000399126 TTC38Q5R3I4 469 aa17.3■□□□□ 0.36
COL25A1-201ENST00000399126 MIGA2Q7L4E1 593 aa17.3■□□□□ 0.36
COL25A1-201ENST00000399126 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.3■□□□□ 0.36
COL25A1-201ENST00000399126 MYOZ2Q9NPC6 264 aa17.3■□□□□ 0.36
COL25A1-201ENST00000399126 PCDHA6Q9UN73 950 aa17.3■□□□□ 0.36
COL25A1-201ENST00000399126 PCDHA8Q9Y5H6 950 aa17.3■□□□□ 0.36
COL25A1-201ENST00000399126 TERF1P54274 439 aa17.3■□□□□ 0.36
COL25A1-201ENST00000399126 FAM151AQ8WW52 585 aa17.3■□□□□ 0.36
COL25A1-201ENST00000399126 COA7Q96BR5 231 aa17.3■□□□□ 0.36
COL25A1-201ENST00000399126 ZBED3Q96IU2 234 aaPredicted RBP17.3■□□□□ 0.36
COL25A1-201ENST00000399126 SDF4Q9BRK5 362 aa17.3■□□□□ 0.36
COL25A1-201ENST00000399126 ASTN2O75129 1339 aaPredicted RBP17.3■□□□□ 0.36
COL25A1-201ENST00000399126 CALML3P27482 149 aa17.29■□□□□ 0.36
COL25A1-201ENST00000399126 NUP88Q99567 741 aaPredicted RBP17.29■□□□□ 0.36
COL25A1-201ENST00000399126 DNAJC25Q9H1X3 360 aa17.29■□□□□ 0.36
COL25A1-201ENST00000399126 KANSL2Q9H9L4 492 aa17.29■□□□□ 0.36
COL25A1-201ENST00000399126 SEC63Q9UGP8 760 aaKnown RBP17.29■□□□□ 0.36
COL25A1-201ENST00000399126 COL2A1P02458 1487 aaPredicted RBP17.29■□□□□ 0.36
COL25A1-201ENST00000399126 SYKP43405 635 aa17.29■□□□□ 0.36
COL25A1-201ENST00000399126 TMEM179Q6ZVK1 233 aa17.29■□□□□ 0.36
COL25A1-201ENST00000399126 ADGRF4Q8IZF3 695 aa17.29■□□□□ 0.36
COL25A1-201ENST00000399126 JMJD4Q9H9V9 463 aa17.29■□□□□ 0.36
COL25A1-201ENST00000399126 GJA3Q9Y6H8 435 aa17.29■□□□□ 0.36
COL25A1-201ENST00000399126 PPP1R11O60927 126 aaPredicted RBP17.28■□□□□ 0.36
COL25A1-201ENST00000399126 MCM7P33993 719 aa17.28■□□□□ 0.36
COL25A1-201ENST00000399126 SASS6Q6UVJ0 657 aa17.28■□□□□ 0.36
COL25A1-201ENST00000399126 CSRNP2Q9H175 543 aa17.28■□□□□ 0.36
COL25A1-201ENST00000399126 NOL7Q9UMY1 257 aaKnown RBP17.28■□□□□ 0.36
COL25A1-201ENST00000399126 ARFGEF1Q9Y6D6 1849 aa17.28■□□□□ 0.36
COL25A1-201ENST00000399126 A0A1W2PRG0 241 aa17.28■□□□□ 0.36
COL25A1-201ENST00000399126 USP17L10C9JJH3 530 aa17.28■□□□□ 0.36
COL25A1-201ENST00000399126 PTGDRQ13258 359 aa17.28■□□□□ 0.36
COL25A1-201ENST00000399126 SAMD7Q7Z3H4 446 aa17.28■□□□□ 0.36
COL25A1-201ENST00000399126 LUZP1Q86V48 1076 aa17.28■□□□□ 0.36
COL25A1-201ENST00000399126 MTMR14Q8NCE2 650 aa17.28■□□□□ 0.36
COL25A1-201ENST00000399126 CCDC148Q8NFR7 591 aa17.28■□□□□ 0.36
COL25A1-201ENST00000399126 USP25Q9UHP3 1055 aa17.28■□□□□ 0.36
COL25A1-201ENST00000399126 SRPRBQ9Y5M8 271 aaKnown RBP17.28■□□□□ 0.36
COL25A1-201ENST00000399126 SMCO2A6NFE2 343 aa17.27■□□□□ 0.36
COL25A1-201ENST00000399126 GMPSP49915 693 aaPredicted RBP17.27■□□□□ 0.36
COL25A1-201ENST00000399126 INF2Q27J81 1249 aa17.27■□□□□ 0.36
COL25A1-201ENST00000399126 C11orf57Q6ZUT1 292 aaPredicted RBP17.27■□□□□ 0.36
COL25A1-201ENST00000399126 MKL1Q969V6 931 aa17.27■□□□□ 0.36
COL25A1-201ENST00000399126 ZMYND12Q9H0C1 365 aa17.27■□□□□ 0.36
COL25A1-201ENST00000399126 NYAP2Q9P242 653 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms