RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 ATP1A3P13637 1013 aa20.09■□□□□ 0.81
HLA-DQB1-204ENST00000399084 TNNT1P13805 278 aa20.09■□□□□ 0.81
HLA-DQB1-204ENST00000399084 PTPN14Q15678 1187 aa20.09■□□□□ 0.81
HLA-DQB1-204ENST00000399084 SOGA3Q5TF21 947 aa20.09■□□□□ 0.81
HLA-DQB1-204ENST00000399084 HEATR3Q7Z4Q2 680 aa20.09■□□□□ 0.81
HLA-DQB1-204ENST00000399084 COL23A1Q86Y22 540 aaPredicted RBP20.09■□□□□ 0.81
HLA-DQB1-204ENST00000399084 CCAR2Q8N163 923 aaKnown RBP20.09■□□□□ 0.81
HLA-DQB1-204ENST00000399084 CCDC17Q96LX7 622 aa20.09■□□□□ 0.81
HLA-DQB1-204ENST00000399084 MTMR4Q9NYA4 1195 aa20.09■□□□□ 0.81
HLA-DQB1-204ENST00000399084 G3V3G9 751 aa20.08■□□□□ 0.81
HLA-DQB1-204ENST00000399084 NPM3O75607 178 aaKnown RBP20.08■□□□□ 0.81
HLA-DQB1-204ENST00000399084 DCAF8Q5TAQ9 597 aa20.08■□□□□ 0.81
HLA-DQB1-204ENST00000399084 NYAP1Q6ZVC0 841 aa20.08■□□□□ 0.81
HLA-DQB1-204ENST00000399084 TEKT1Q969V4 418 aa20.08■□□□□ 0.81
HLA-DQB1-204ENST00000399084 CEP95Q96GE4 821 aa20.08■□□□□ 0.81
HLA-DQB1-204ENST00000399084 EHD4Q9H223 541 aa20.08■□□□□ 0.81
HLA-DQB1-204ENST00000399084 SERPINB13Q9UIV8 391 aa20.08■□□□□ 0.81
HLA-DQB1-204ENST00000399084 A0A087X0B3 334 aa20.07■□□□□ 0.8
HLA-DQB1-204ENST00000399084 IGKV6D-41A0A0C4DH26 115 aa20.07■□□□□ 0.8
HLA-DQB1-204ENST00000399084 SNHG28P0DPA3 235 aa20.07■□□□□ 0.8
HLA-DQB1-204ENST00000399084 SYCP1Q15431 976 aa20.07■□□□□ 0.8
HLA-DQB1-204ENST00000399084 STYK1Q6J9G0 422 aa20.07■□□□□ 0.8
HLA-DQB1-204ENST00000399084 ARMCX5Q6P1M9 558 aa20.07■□□□□ 0.8
HLA-DQB1-204ENST00000399084 PDXDC2PQ6P474 469 aa20.07■□□□□ 0.8
HLA-DQB1-204ENST00000399084 GPKOWQ92917 476 aaPredicted RBP eCLIP20.07■□□□□ 0.8
HLA-DQB1-204ENST00000399084 TTF2Q9UNY4 1162 aaKnown RBP20.07■□□□□ 0.8
HLA-DQB1-204ENST00000399084 WNT7AO00755 349 aa20.07■□□□□ 0.8
HLA-DQB1-204ENST00000399084 HLA-DOAP06340 250 aa20.07■□□□□ 0.8
HLA-DQB1-204ENST00000399084 VEGFAP15692 232 aaPredicted RBP20.07■□□□□ 0.8
HLA-DQB1-204ENST00000399084 HOXA7P31268 230 aaPredicted RBP20.07■□□□□ 0.8
HLA-DQB1-204ENST00000399084 NAPAP54920 295 aa20.07■□□□□ 0.8
HLA-DQB1-204ENST00000399084 NONOQ15233 471 aaKnown RBP eCLIP20.07■□□□□ 0.8
HLA-DQB1-204ENST00000399084 SLC4A8Q2Y0W8 1093 aa20.07■□□□□ 0.8
HLA-DQB1-204ENST00000399084 PPP1R18Q6NYC8 613 aa20.07■□□□□ 0.8
HLA-DQB1-204ENST00000399084 DHX36Q9H2U1 1008 aaKnown RBP20.07■□□□□ 0.8
HLA-DQB1-204ENST00000399084 TMX1Q9H3N1 280 aa20.07■□□□□ 0.8
HLA-DQB1-204ENST00000399084 AFMP43652 599 aa20.06■□□□□ 0.8
HLA-DQB1-204ENST00000399084 SPAG1Q07617 926 aa20.06■□□□□ 0.8
HLA-DQB1-204ENST00000399084 CUL4BQ13620 913 aa20.06■□□□□ 0.8
HLA-DQB1-204ENST00000399084 SLC35G1Q2M3R5 365 aa20.06■□□□□ 0.8
HLA-DQB1-204ENST00000399084 SLC51AQ86UW1 340 aa20.06■□□□□ 0.8
HLA-DQB1-204ENST00000399084 USP40Q9NVE5 1235 aa20.06■□□□□ 0.8
HLA-DQB1-204ENST00000399084 RIMBP2O15034 1052 aa20.05■□□□□ 0.8
HLA-DQB1-204ENST00000399084 TTLL1O95922 423 aa20.05■□□□□ 0.8
HLA-DQB1-204ENST00000399084 APBA3O96018 575 aa20.05■□□□□ 0.8
HLA-DQB1-204ENST00000399084 ARID5BQ14865 1188 aa20.05■□□□□ 0.8
HLA-DQB1-204ENST00000399084 ZNF827Q17R98 1081 aa20.05■□□□□ 0.8
HLA-DQB1-204ENST00000399084 NOM1Q5C9Z4 860 aaKnown RBP20.05■□□□□ 0.8
HLA-DQB1-204ENST00000399084 GPATCH4Q5T3I0 446 aaKnown RBP20.05■□□□□ 0.8
HLA-DQB1-204ENST00000399084 CEP135Q66GS9 1140 aa20.05■□□□□ 0.8
HLA-DQB1-204ENST00000399084 SPECC1LQ69YQ0 1117 aa20.05■□□□□ 0.8
HLA-DQB1-204ENST00000399084 TYW1BQ6NUM6 668 aa20.05■□□□□ 0.8
HLA-DQB1-204ENST00000399084 PDCL3Q9H2J4 239 aa20.05■□□□□ 0.8
HLA-DQB1-204ENST00000399084 SMCO2A6NFE2 343 aa20.05■□□□□ 0.8
HLA-DQB1-204ENST00000399084 UBA7P41226 1012 aa20.05■□□□□ 0.8
HLA-DQB1-204ENST00000399084 PPP1R2P41236 205 aa20.05■□□□□ 0.8
HLA-DQB1-204ENST00000399084 FMR1Q06787 632 aaKnown RBP eCLIP20.05■□□□□ 0.8
HLA-DQB1-204ENST00000399084 TBX2Q13207 712 aaPredicted RBP20.05■□□□□ 0.8
HLA-DQB1-204ENST00000399084 KCNB1Q14721 858 aa20.05■□□□□ 0.8
HLA-DQB1-204ENST00000399084 IL17AQ16552 155 aa20.05■□□□□ 0.8
HLA-DQB1-204ENST00000399084 FILIP1LQ4L180 1135 aa20.05■□□□□ 0.8
HLA-DQB1-204ENST00000399084 ZNF658Q5TYW1 1059 aaPredicted RBP20.05■□□□□ 0.8
HLA-DQB1-204ENST00000399084 STRIP1Q5VSL9 837 aa20.05■□□□□ 0.8
HLA-DQB1-204ENST00000399084 CC2D2BQ6DHV5 1058 aa20.05■□□□□ 0.8
HLA-DQB1-204ENST00000399084 C16orf45Q96MC5 204 aaPredicted RBP20.05■□□□□ 0.8
HLA-DQB1-204ENST00000399084 ZDHHC15Q96MV8 337 aa20.05■□□□□ 0.8
HLA-DQB1-204ENST00000399084 GLT8D2Q9H1C3 349 aa20.05■□□□□ 0.8
HLA-DQB1-204ENST00000399084 DISC1Q9NRI5 854 aa20.05■□□□□ 0.8
HLA-DQB1-204ENST00000399084 A0A1B0GTH6 734 aa20.04■□□□□ 0.8
HLA-DQB1-204ENST00000399084 CTIFO43310 598 aaKnown RBP20.04■□□□□ 0.8
HLA-DQB1-204ENST00000399084 MMP10P09238 476 aa20.04■□□□□ 0.8
HLA-DQB1-204ENST00000399084 PDHBP11177 359 aa20.04■□□□□ 0.8
HLA-DQB1-204ENST00000399084 NR1I3Q14994 352 aa20.04■□□□□ 0.8
HLA-DQB1-204ENST00000399084 GRIPAP1Q4V328 841 aa20.04■□□□□ 0.8
HLA-DQB1-204ENST00000399084 NEK8Q86SG6 692 aa20.04■□□□□ 0.8
HLA-DQB1-204ENST00000399084 GRAMD1CQ8IYS0 662 aa20.04■□□□□ 0.8
HLA-DQB1-204ENST00000399084 CERS5Q8N5B7 392 aa20.04■□□□□ 0.8
HLA-DQB1-204ENST00000399084 RWDD2AQ9UIY3 292 aa20.04■□□□□ 0.8
HLA-DQB1-204ENST00000399084 BAZ2BQ9UIF8 2168 aaKnown RBP20.04■□□□□ 0.8
HLA-DQB1-204ENST00000399084 LRRC10BA6NIK2 292 aa20.03■□□□□ 0.8
HLA-DQB1-204ENST00000399084 PPP1R3GB7ZBB8 358 aa20.03■□□□□ 0.8
HLA-DQB1-204ENST00000399084 STAT6P42226 847 aa20.03■□□□□ 0.8
HLA-DQB1-204ENST00000399084 CDKAL1Q5VV42 579 aa20.03■□□□□ 0.8
HLA-DQB1-204ENST00000399084 RRAGBQ5VZM2 374 aa20.03■□□□□ 0.8
HLA-DQB1-204ENST00000399084 KIF18AQ8NI77 898 aa20.03■□□□□ 0.8
HLA-DQB1-204ENST00000399084 SYNRGQ9UMZ2 1314 aa20.03■□□□□ 0.8
HLA-DQB1-204ENST00000399084 GOLGA6L9A6NEM1 432 aa20.02■□□□□ 0.8
HLA-DQB1-204ENST00000399084 H0YIN7 160 aa20.02■□□□□ 0.8
HLA-DQB1-204ENST00000399084 ARHGAP6O43182 974 aa20.02■□□□□ 0.8
HLA-DQB1-204ENST00000399084 STX10O60499 249 aa20.02■□□□□ 0.8
HLA-DQB1-204ENST00000399084 HSP90AA2PQ14568 343 aaPredicted RBP20.02■□□□□ 0.8
HLA-DQB1-204ENST00000399084 INF2Q27J81 1249 aa20.02■□□□□ 0.8
HLA-DQB1-204ENST00000399084 USP17L2Q6R6M4 530 aa20.02■□□□□ 0.8
HLA-DQB1-204ENST00000399084 REXO1Q8N1G1 1221 aaKnown RBP20.02■□□□□ 0.8
HLA-DQB1-204ENST00000399084 ANKRD20A12PQ8NF67 263 aa20.02■□□□□ 0.8
HLA-DQB1-204ENST00000399084 DPF2Q92785 391 aa20.02■□□□□ 0.8
HLA-DQB1-204ENST00000399084 CCDC47Q96A33 483 aaKnown RBP20.02■□□□□ 0.8
HLA-DQB1-204ENST00000399084 RGPD3A6NKT7 1758 aaPredicted RBP20.02■□□□□ 0.79
HLA-DQB1-204ENST00000399084 RGPD4Q7Z3J3 1758 aa20.02■□□□□ 0.79
HLA-DQB1-204ENST00000399084 RIOK3O14730 519 aaKnown RBP20.02■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms