RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 SLC16A2P36021 539 aa14.51□□□□□ -0.09
HLA-DQB1-203ENST00000399082 CAP1Q01518 475 aa14.51□□□□□ -0.09
HLA-DQB1-203ENST00000399082 COG2Q14746 738 aa14.51□□□□□ -0.09
HLA-DQB1-203ENST00000399082 NFXL1Q6ZNB6 911 aa14.51□□□□□ -0.09
HLA-DQB1-203ENST00000399082 CATIPQ7Z7H3 387 aa14.51□□□□□ -0.09
HLA-DQB1-203ENST00000399082 TMTC2Q8N394 836 aa14.51□□□□□ -0.09
HLA-DQB1-203ENST00000399082 LARP6Q9BRS8 491 aaKnown RBP14.51□□□□□ -0.09
HLA-DQB1-203ENST00000399082 ALDH8A1Q9H2A2 487 aaPredicted RBP14.51□□□□□ -0.09
HLA-DQB1-203ENST00000399082 UPF2Q9HAU5 1272 aaKnown RBP14.51□□□□□ -0.09
HLA-DQB1-203ENST00000399082 FAM217BQ9NTX9 383 aaPredicted RBP14.51□□□□□ -0.09
HLA-DQB1-203ENST00000399082 BTBD7Q9P203 1132 aa14.51□□□□□ -0.09
HLA-DQB1-203ENST00000399082 RBPJLQ9UBG7 517 aa14.51□□□□□ -0.09
HLA-DQB1-203ENST00000399082 CPA4Q9UI42 421 aa14.51□□□□□ -0.09
HLA-DQB1-203ENST00000399082 FEM1BQ9UK73 627 aa14.51□□□□□ -0.09
HLA-DQB1-203ENST00000399082 NID2Q14112 1375 aa14.5□□□□□ -0.09
HLA-DQB1-203ENST00000399082 CCDC69A6NI79 296 aa14.5□□□□□ -0.09
HLA-DQB1-203ENST00000399082 NEK4P51957 841 aa14.5□□□□□ -0.09
HLA-DQB1-203ENST00000399082 AK2P54819 239 aa14.5□□□□□ -0.09
HLA-DQB1-203ENST00000399082 ASPRV1Q53RT3 343 aa14.5□□□□□ -0.09
HLA-DQB1-203ENST00000399082 NBPF11Q86T75 865 aa14.5□□□□□ -0.09
HLA-DQB1-203ENST00000399082 MAP3K14Q99558 947 aa14.5□□□□□ -0.09
HLA-DQB1-203ENST00000399082 SLF1Q9BQI6 1058 aa14.5□□□□□ -0.09
HLA-DQB1-203ENST00000399082 UBA5Q9GZZ9 404 aa14.5□□□□□ -0.09
HLA-DQB1-203ENST00000399082 ZFYVE28Q9HCC9 887 aa14.5□□□□□ -0.09
HLA-DQB1-203ENST00000399082 MORF4L1Q9UBU8 362 aa14.5□□□□□ -0.09
HLA-DQB1-203ENST00000399082 PRR12Q9ULL5 1215 aa14.5□□□□□ -0.09
HLA-DQB1-203ENST00000399082 VWA5AO00534 786 aa14.49□□□□□ -0.09
HLA-DQB1-203ENST00000399082 CYTH3O43739 400 aa14.49□□□□□ -0.09
HLA-DQB1-203ENST00000399082 LARGE1O95461 756 aa14.49□□□□□ -0.09
HLA-DQB1-203ENST00000399082 HSPA8P11142 646 aaKnown RBP14.49□□□□□ -0.09
HLA-DQB1-203ENST00000399082 STAT2P52630 851 aa14.49□□□□□ -0.09
HLA-DQB1-203ENST00000399082 Q3C1V9 767 aa14.49□□□□□ -0.09
HLA-DQB1-203ENST00000399082 GPATCH4Q5T3I0 446 aaKnown RBP14.49□□□□□ -0.09
HLA-DQB1-203ENST00000399082 FAM160B2Q86V87 743 aa14.49□□□□□ -0.09
HLA-DQB1-203ENST00000399082 MICU3Q86XE3 530 aa14.49□□□□□ -0.09
HLA-DQB1-203ENST00000399082 CCDC144CPQ8IYA2 1237 aa14.49□□□□□ -0.09
HLA-DQB1-203ENST00000399082 ANKRD13CQ8N6S4 541 aa14.49□□□□□ -0.09
HLA-DQB1-203ENST00000399082 SMCR8Q8TEV9 937 aaPredicted RBP14.49□□□□□ -0.09
HLA-DQB1-203ENST00000399082 NUP133Q8WUM0 1156 aa14.49□□□□□ -0.09
HLA-DQB1-203ENST00000399082 KIFC2Q96AC6 838 aa14.49□□□□□ -0.09
HLA-DQB1-203ENST00000399082 SLC12A7Q9Y666 1083 aa14.49□□□□□ -0.09
HLA-DQB1-203ENST00000399082 ZNF536O15090 1300 aa14.48□□□□□ -0.09
HLA-DQB1-203ENST00000399082 SMCHD1A6NHR9 2005 aa14.48□□□□□ -0.09
HLA-DQB1-203ENST00000399082 GOLGA8BA8MQT2 603 aa14.48□□□□□ -0.09
HLA-DQB1-203ENST00000399082 KLRF2D3W0D1 207 aa14.48□□□□□ -0.09
HLA-DQB1-203ENST00000399082 ZBTB43O43298 467 aa14.48□□□□□ -0.09
HLA-DQB1-203ENST00000399082 PLEKHA8P1O95397 391 aa14.48□□□□□ -0.09
HLA-DQB1-203ENST00000399082 CD2BP2O95400 341 aaKnown RBP14.48□□□□□ -0.09
HLA-DQB1-203ENST00000399082 PARP1P09874 1014 aaKnown RBP14.48□□□□□ -0.09
HLA-DQB1-203ENST00000399082 CTGFP29279 349 aa14.48□□□□□ -0.09
HLA-DQB1-203ENST00000399082 PDIA3P30101 505 aaKnown RBP14.48□□□□□ -0.09
HLA-DQB1-203ENST00000399082 CDC27P30260 824 aa14.48□□□□□ -0.09
HLA-DQB1-203ENST00000399082 GCLCP48506 637 aaPredicted RBP14.48□□□□□ -0.09
HLA-DQB1-203ENST00000399082 SNAP25P60880 206 aa14.48□□□□□ -0.09
HLA-DQB1-203ENST00000399082 FGD1P98174 961 aa14.48□□□□□ -0.09
HLA-DQB1-203ENST00000399082 TMEM132BQ14DG7 1078 aa14.48□□□□□ -0.09
HLA-DQB1-203ENST00000399082 SYDE2Q5VT97 1194 aa14.48□□□□□ -0.09
HLA-DQB1-203ENST00000399082 PRPF38AQ8NAV1 312 aaKnown RBP14.48□□□□□ -0.09
HLA-DQB1-203ENST00000399082 SLC38A10Q9HBR0 1119 aa14.48□□□□□ -0.09
HLA-DQB1-203ENST00000399082 HOXC10Q9NYD6 342 aa14.48□□□□□ -0.09
HLA-DQB1-203ENST00000399082 ZNF214Q9UL59 606 aaPredicted RBP14.48□□□□□ -0.09
HLA-DQB1-203ENST00000399082 TPCN1Q9ULQ1 816 aa14.48□□□□□ -0.09
HLA-DQB1-203ENST00000399082 ISY1Q9ULR0 285 aaKnown RBP14.48□□□□□ -0.09
HLA-DQB1-203ENST00000399082 BAZ2BQ9UIF8 2168 aaKnown RBP14.47□□□□□ -0.09
HLA-DQB1-203ENST00000399082 GPR25O00155 361 aa14.47□□□□□ -0.09
HLA-DQB1-203ENST00000399082 TAL1P17542 331 aaPredicted RBP14.47□□□□□ -0.09
HLA-DQB1-203ENST00000399082 RCAN1P53805 252 aa14.47□□□□□ -0.09
HLA-DQB1-203ENST00000399082 FUT2Q10981 343 aa14.47□□□□□ -0.09
HLA-DQB1-203ENST00000399082 RABEP1Q15276 862 aa14.47□□□□□ -0.09
HLA-DQB1-203ENST00000399082 FAM110CQ1W6H9 321 aa14.47□□□□□ -0.09
HLA-DQB1-203ENST00000399082 NOM1Q5C9Z4 860 aaKnown RBP14.47□□□□□ -0.09
HLA-DQB1-203ENST00000399082 TMTC3Q6ZXV5 915 aa14.47□□□□□ -0.09
HLA-DQB1-203ENST00000399082 SRBD1Q8N5C6 995 aaKnown RBP14.47□□□□□ -0.09
HLA-DQB1-203ENST00000399082 FANCBQ8NB91 859 aa14.47□□□□□ -0.09
HLA-DQB1-203ENST00000399082 CHURC1Q8WUH1 139 aa14.47□□□□□ -0.09
HLA-DQB1-203ENST00000399082 MTMR8Q96EF0 704 aa14.47□□□□□ -0.09
HLA-DQB1-203ENST00000399082 PAGR1Q9BTK6 254 aa14.47□□□□□ -0.09
HLA-DQB1-203ENST00000399082 BEGAINQ9BUH8 593 aa14.47□□□□□ -0.09
HLA-DQB1-203ENST00000399082 RANBP17Q9H2T7 1088 aaKnown RBP14.47□□□□□ -0.09
HLA-DQB1-203ENST00000399082 RABGAP1Q9Y3P9 1069 aa14.47□□□□□ -0.09
HLA-DQB1-203ENST00000399082 MGAMO43451 1857 aa14.46□□□□□ -0.09
HLA-DQB1-203ENST00000399082 GOLGA8AA7E2F4 631 aa14.46□□□□□ -0.09
HLA-DQB1-203ENST00000399082 CALM1P0DP23 149 aa14.46□□□□□ -0.09
HLA-DQB1-203ENST00000399082 CALM2P0DP24 149 aa14.46□□□□□ -0.09
HLA-DQB1-203ENST00000399082 CALM3P0DP25 149 aa14.46□□□□□ -0.09
HLA-DQB1-203ENST00000399082 ADD1P35611 737 aaKnown RBP14.46□□□□□ -0.09
HLA-DQB1-203ENST00000399082 ERVK-9P63128 1117 aa14.46□□□□□ -0.09
HLA-DQB1-203ENST00000399082 ERVK-24P63145 666 aa14.46□□□□□ -0.09
HLA-DQB1-203ENST00000399082 ST3GAL1Q11201 340 aa14.46□□□□□ -0.09
HLA-DQB1-203ENST00000399082 IKQ13123 557 aaPredicted RBP14.46□□□□□ -0.09
HLA-DQB1-203ENST00000399082 ADGRF4Q8IZF3 695 aa14.46□□□□□ -0.09
HLA-DQB1-203ENST00000399082 CMTR1Q8N1G2 835 aaKnown RBP14.46□□□□□ -0.09
HLA-DQB1-203ENST00000399082 CTCFLQ8NI51 663 aaPredicted RBP14.46□□□□□ -0.09
HLA-DQB1-203ENST00000399082 GTF3C2Q8WUA4 911 aaPredicted RBP14.46□□□□□ -0.09
HLA-DQB1-203ENST00000399082 ZNF274Q96GC6 653 aaPredicted RBP14.46□□□□□ -0.09
HLA-DQB1-203ENST00000399082 ARHGAP39Q9C0H5 1083 aa14.46□□□□□ -0.09
HLA-DQB1-203ENST00000399082 RIOX1Q9H6W3 641 aa14.46□□□□□ -0.09
HLA-DQB1-203ENST00000399082 JMJD4Q9H9V9 463 aa14.46□□□□□ -0.09
HLA-DQB1-203ENST00000399082 NCOA5Q9HCD5 579 aaKnown RBP14.46□□□□□ -0.09
HLA-DQB1-203ENST00000399082 PLXNB2O15031 1838 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms